RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ZNRF2Q8NHG8 242 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 GTSF1LQ9H1H1 148 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 CSDC2Q9Y534 153 aaKnown RBP5.34□□□□□ -1.55
CXCR4-202ENST00000409817 NSD1Q96L73 2696 aaPredicted RBP5.33□□□□□ -1.56
CXCR4-202ENST00000409817 ZNF815PA8K554 130 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 H7C423 109 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 CEND1Q8N111 149 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 LINC00612Q8N6U2 182 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 SLC25A29Q8N8R3 303 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 DEFB104AQ8WTQ1 72 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 TTTY13Q9BZ97 58 aa5.33□□□□□ -1.56
CXCR4-202ENST00000409817 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 TMEM223A0PJW6 202 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 LEPROTO15243 131 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE7O76087 117 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE12FP0CL80 117 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE12GP0CL81 117 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE12IP0CL82 117 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 PHLDA1Q8WV24 401 aaPredicted RBP5.32□□□□□ -1.56
CXCR4-202ENST00000409817 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 Q9UF83 564 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 OTOGQ6ZRI0 2925 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 CUBNO60494 3623 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 TRGV4A0A0C4DH28 118 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 J3QQQ9 107 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
CXCR4-202ENST00000409817 LGALS3P17931 250 aaKnown RBP5.32□□□□□ -1.56
CXCR4-202ENST00000409817 EMP1P54849 157 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 UBE2V1Q13404 147 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 SCGB1D4Q6XE38 83 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 HIST1H4GQ99525 98 aa5.32□□□□□ -1.56
CXCR4-202ENST00000409817 OPRPNQ99935 248 aaPredicted RBP5.32□□□□□ -1.56
CXCR4-202ENST00000409817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.31□□□□□ -1.56
CXCR4-202ENST00000409817 IGHV3-38A0A0C4DH36 116 aa5.31□□□□□ -1.56
CXCR4-202ENST00000409817 A0A0J9YXV3 536 aa5.31□□□□□ -1.56
CXCR4-202ENST00000409817 IGKV2-29A2NJV5 120 aaPredicted RBP5.31□□□□□ -1.56
CXCR4-202ENST00000409817 LYRM9A8MSI8 78 aa5.31□□□□□ -1.56
CXCR4-202ENST00000409817 VAMP3Q15836 100 aa5.31□□□□□ -1.56
CXCR4-202ENST00000409817 SPANXB1Q9NS25 103 aaPredicted RBP5.31□□□□□ -1.56
CXCR4-202ENST00000409817 FXYD2P54710 66 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 FHL2Q14192 279 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 FAM19A3Q7Z5A8 133 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 SBSPONQ8IVN8 264 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE12JA6NER3 117 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 UBE2D1P51668 147 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE4Q13068 117 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 GAGE5Q13069 117 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 Q6ZUT4 128 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 TMEM243Q9BU79 118 aa5.3□□□□□ -1.56
CXCR4-202ENST00000409817 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
CXCR4-202ENST00000409817 JMJD1CQ15652 2540 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 HIVEP1P15822 2718 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 IGHV1-58A0A0C4DH39 117 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 A0A0J9YY99 117 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 A0A1B0GWB2 263 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 UBE2L6O14933 153 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 LINC00694P0DN24 101 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 HERVK_113P63121 156 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 SRSF9Q13242 221 aaKnown RBP eCLIP5.29□□□□□ -1.56
CXCR4-202ENST00000409817 CEMP1Q6PRD7 247 aaPredicted RBP5.29□□□□□ -1.56
CXCR4-202ENST00000409817 NTM-AS1Q6ZSK4 140 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 GTF2H5Q6ZYL4 71 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 OR5A1Q8NGJ0 315 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 TMEM101Q96IK0 257 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
CXCR4-202ENST00000409817 MIFP14174 115 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 AMMECR1LQ6DCA0 310 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 Q6ZVH6 145 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 IGHV3-30-3P0DP02 117 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 TSPEAR-AS2P59090 65 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 SPATA3Q8NHX4 192 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 CDC42SE2Q9NRR3 84 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 NHP2Q9NX24 153 aaKnown RBP5.28□□□□□ -1.56
CXCR4-202ENST00000409817 PRO0255Q9UI72 69 aa5.28□□□□□ -1.56
CXCR4-202ENST00000409817 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 H3BUT2 72 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 CCL25O15444 150 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 DEFB130BP0DP73 79 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 DEFB130AP0DP74 79 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 FABP2P12104 132 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 C12orf74Q32Q52 190 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 VSIG2Q96IQ7 327 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 F8P00451 2351 aa5.27□□□□□ -1.57
CXCR4-202ENST00000409817 TEX48A0A1B0GUV7 120 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 A8MZ25 164 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 K7EP13 123 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 DEFB135Q30KP9 77 aa5.26□□□□□ -1.57
CXCR4-202ENST00000409817 RNASE13Q5GAN3 156 aaKnown RBP5.26□□□□□ -1.57
CXCR4-202ENST00000409817 LINC00242Q5T6M2 205 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms