RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 FAM104BQ5XKR9 115 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 URB1-AS1Q96HZ7 61 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 Q9UF83 564 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 SCGB1D1O95968 90 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 RAB4AP20338 218 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 PMCHP20382 165 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 LINC01600Q96MT4 127 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 C11orf21Q9P2W6 132 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 DPH3P1Q9H4G8 78 aa8.19□□□□□ -1.1
CHRNA1-203ENST00000409219 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 SNAI2O43623 268 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 PRSS1P07477 247 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 OR5AL1P0C617 328 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 LINC00614P0C842 121 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 NTF3P20783 257 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 RNASEKQ6P5S7 137 aaKnown RBP8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 FAM19A2Q8N3H0 131 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 C1orf43Q9BWL3 253 aa8.18□□□□□ -1.1
CHRNA1-203ENST00000409219 PPBPP02775 128 aa8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 CIRBPQ14011 172 aaKnown RBP8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 TWIST1Q15672 202 aa8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 MRPL51Q4U2R6 128 aaKnown RBP8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
CHRNA1-203ENST00000409219 CACNG7P62955 275 aa8.16□□□□□ -1.1
CHRNA1-203ENST00000409219 DGAT2L7PQ6IED9 249 aa8.16□□□□□ -1.1
CHRNA1-203ENST00000409219 SDIM1Q6ZPB5 146 aa8.16□□□□□ -1.1
CHRNA1-203ENST00000409219 AMN1Q8IY45 258 aa8.16□□□□□ -1.1
CHRNA1-203ENST00000409219 A0A087WX48 190 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 DDTP30046 118 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 KRTDAPP60985 99 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 ENHOQ6UWT2 76 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 PTH2Q96A98 100 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 RNF185Q96GF1 192 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 PRELID3AQ96N28 172 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 LAMTOR2Q9Y2Q5 125 aa8.15□□□□□ -1.1
CHRNA1-203ENST00000409219 IGHV1-24A0A0C4DH33 117 aa8.14□□□□□ -1.11
CHRNA1-203ENST00000409219 D6R8Y8 96 aa8.14□□□□□ -1.11
CHRNA1-203ENST00000409219 RNASE3P12724 160 aaKnown RBP8.14□□□□□ -1.11
CHRNA1-203ENST00000409219 CTAG1AP78358 180 aa8.14□□□□□ -1.11
CHRNA1-203ENST00000409219 PRO1933Q9H354 126 aa8.14□□□□□ -1.11
CHRNA1-203ENST00000409219 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 AP5S1Q9NUS5 200 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 A0A087WYN8 130 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 MUC21A0A0G2JKD1 596 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 A0A0J9YXV3 536 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 MUC21A0A140T8X8 626 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 CKS2P33552 79 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 PMCHL1Q16048 86 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 UFSP1Q6NVU6 142 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 OR10AG1Q8NH19 301 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
CHRNA1-203ENST00000409219 MUC2Q02817 5179 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 A8MWV9 139 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 CRPP02741 224 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 KRTAP10-8P60410 259 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 JPT2Q9H910 190 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 HSPB8Q9UJY1 196 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 KIF25-AS1Q9Y6Z4 181 aa8.12□□□□□ -1.11
CHRNA1-203ENST00000409219 PRSS47A8MTI9 375 aa8.11□□□□□ -1.11
CHRNA1-203ENST00000409219 NPYP01303 97 aa8.11□□□□□ -1.11
CHRNA1-203ENST00000409219 CHTF8P0CG12 524 aa8.11□□□□□ -1.11
CHRNA1-203ENST00000409219 IFI27P40305 119 aaPredicted RBP8.11□□□□□ -1.11
CHRNA1-203ENST00000409219 SSTP61278 116 aa8.11□□□□□ -1.11
CHRNA1-203ENST00000409219 H3BVH4 76 aa8.1□□□□□ -1.11
CHRNA1-203ENST00000409219 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
CHRNA1-203ENST00000409219 C20orf202A1L168 122 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 SYS1-DBNDD2H3BUS1 97 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 MPV17L2Q567V2 206 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 SPACA4Q8TDM5 124 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 C14orf144Q96I85 54 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
CHRNA1-203ENST00000409219 A0A096LNJ9 63 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 SMKR1H3BMG3 65 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 S100A4P26447 101 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 MRAP2Q96G30 205 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 NXT2Q9NPJ8 142 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-203ENST00000409219 NCR2O95944 276 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms