RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TRBV27A0A0K0K1C4 114 aa13.43□□□□□ -0.26
RHBDD3-202ENST00000406335 CAMPP49913 170 aa13.43□□□□□ -0.26
RHBDD3-202ENST00000406335 MRPL51Q4U2R6 128 aaKnown RBP13.43□□□□□ -0.26
RHBDD3-202ENST00000406335 NRACQ8N912 160 aa13.43□□□□□ -0.26
RHBDD3-202ENST00000406335 IGHV3-64A0A075B6Q5 118 aa13.42□□□□□ -0.26
RHBDD3-202ENST00000406335 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
RHBDD3-202ENST00000406335 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
RHBDD3-202ENST00000406335 FAM104BQ5XKR9 115 aa13.42□□□□□ -0.26
RHBDD3-202ENST00000406335 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
RHBDD3-202ENST00000406335 C7orf33Q8WU49 177 aa13.4□□□□□ -0.26
RHBDD3-202ENST00000406335 CHCHD10Q8WYQ3 142 aaPredicted RBP13.4□□□□□ -0.26
RHBDD3-202ENST00000406335 A0A087WYN8 130 aa13.39□□□□□ -0.27
RHBDD3-202ENST00000406335 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
RHBDD3-202ENST00000406335 VCYO14598 125 aa13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 SLPIP03973 132 aa13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 SUMO2P61956 95 aaKnown RBP13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 C15orf56Q8N910 161 aa13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 OR5A1Q8NGJ0 315 aa13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 TMEM101Q96IK0 257 aa13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 BTF3L4Q96K17 158 aa13.38□□□□□ -0.27
RHBDD3-202ENST00000406335 A0A1B0GW15 77 aa13.37□□□□□ -0.27
RHBDD3-202ENST00000406335 C7orf77A4D0Y5 90 aa13.37□□□□□ -0.27
RHBDD3-202ENST00000406335 CHTF8P0CG12 524 aa13.37□□□□□ -0.27
RHBDD3-202ENST00000406335 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
RHBDD3-202ENST00000406335 A0A1B0GXF2 115 aa13.36□□□□□ -0.27
RHBDD3-202ENST00000406335 PPP1R17O96001 155 aa13.36□□□□□ -0.27
RHBDD3-202ENST00000406335 RAB14P61106 215 aa13.36□□□□□ -0.27
RHBDD3-202ENST00000406335 MRPL52Q86TS9 123 aaKnown RBP13.36□□□□□ -0.27
RHBDD3-202ENST00000406335 PHOX2AO14813 284 aa13.35□□□□□ -0.27
RHBDD3-202ENST00000406335 FCER1GP30273 86 aa13.35□□□□□ -0.27
RHBDD3-202ENST00000406335 CKS2P33552 79 aa13.35□□□□□ -0.27
RHBDD3-202ENST00000406335 HBBP68871 147 aa13.35□□□□□ -0.27
RHBDD3-202ENST00000406335 CDC42SE2Q9NRR3 84 aa13.35□□□□□ -0.27
RHBDD3-202ENST00000406335 LINC00959A0A1B0GUT2 108 aa13.34□□□□□ -0.27
RHBDD3-202ENST00000406335 LINC00862A6NCI5 91 aa13.34□□□□□ -0.27
RHBDD3-202ENST00000406335 PPP1R2P9O14990 202 aa13.34□□□□□ -0.27
RHBDD3-202ENST00000406335 FOXI1Q12951 378 aa13.34□□□□□ -0.27
RHBDD3-202ENST00000406335 CIRBPQ14011 172 aaKnown RBP13.34□□□□□ -0.27
RHBDD3-202ENST00000406335 HIGD2BQ4VC39 106 aa13.34□□□□□ -0.27
RHBDD3-202ENST00000406335 XCL1P47992 114 aa13.33□□□□□ -0.28
RHBDD3-202ENST00000406335 TRBV24-1A0A075B6N3 115 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 D6R8Y8 96 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 CCL25O15444 150 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 TNFRSF6BO95407 300 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 S100A8P05109 93 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 CFAP161Q6P656 301 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 SPACA4Q8TDM5 124 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 KIR2DL4Q99706 377 aa13.32□□□□□ -0.28
RHBDD3-202ENST00000406335 RNF213Q63HN8 5207 aa13.31□□□□□ -0.28
RHBDD3-202ENST00000406335 F8W036 122 aa13.31□□□□□ -0.28
RHBDD3-202ENST00000406335 ZNF664Q8N3J9 261 aa13.31□□□□□ -0.28
RHBDD3-202ENST00000406335 C20orf78Q9BR46 151 aa13.31□□□□□ -0.28
RHBDD3-202ENST00000406335 NPYP01303 97 aa13.3□□□□□ -0.28
RHBDD3-202ENST00000406335 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
RHBDD3-202ENST00000406335 RNASE13Q5GAN3 156 aaKnown RBP13.3□□□□□ -0.28
RHBDD3-202ENST00000406335 CLLU1Q5K131 121 aa13.3□□□□□ -0.28
RHBDD3-202ENST00000406335 UBE2D4Q9Y2X8 147 aa13.3□□□□□ -0.28
RHBDD3-202ENST00000406335 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
RHBDD3-202ENST00000406335 IFITM2Q01629 132 aa13.29□□□□□ -0.28
RHBDD3-202ENST00000406335 PNRC1Q12796 327 aaPredicted RBP13.29□□□□□ -0.28
RHBDD3-202ENST00000406335 LINC01600Q96MT4 127 aa13.29□□□□□ -0.28
RHBDD3-202ENST00000406335 PLAC8Q9NZF1 115 aa13.29□□□□□ -0.28
RHBDD3-202ENST00000406335 COX6A2Q02221 97 aa13.28□□□□□ -0.28
RHBDD3-202ENST00000406335 SS18Q15532 418 aa13.28□□□□□ -0.28
RHBDD3-202ENST00000406335 ATP5L2Q7Z4Y8 100 aa13.28□□□□□ -0.28
RHBDD3-202ENST00000406335 SMIM2Q9BVW6 85 aa13.28□□□□□ -0.28
RHBDD3-202ENST00000406335 LRP2P98164 4655 aa13.27□□□□□ -0.28
RHBDD3-202ENST00000406335 GVQW2A0A096LPI5 108 aaPredicted RBP13.27□□□□□ -0.29
RHBDD3-202ENST00000406335 IGKV2-24A0A0C4DH68 120 aa13.27□□□□□ -0.29
RHBDD3-202ENST00000406335 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
RHBDD3-202ENST00000406335 CSDC2Q9Y534 153 aaKnown RBP13.27□□□□□ -0.29
RHBDD3-202ENST00000406335 MT-ND4LP03901 98 aa13.26□□□□□ -0.29
RHBDD3-202ENST00000406335 ODF1Q14990 250 aa13.26□□□□□ -0.29
RHBDD3-202ENST00000406335 Q6ZUT4 128 aa13.26□□□□□ -0.29
RHBDD3-202ENST00000406335 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
RHBDD3-202ENST00000406335 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
RHBDD3-202ENST00000406335 TCAPO15273 167 aa13.25□□□□□ -0.29
RHBDD3-202ENST00000406335 CD164L2Q6UWJ8 174 aa13.25□□□□□ -0.29
RHBDD3-202ENST00000406335 PPBPP02775 128 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 TMEM136Q6ZRR5 245 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 ORMDL3Q8N138 153 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 STPG4Q8N801 248 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 TMEM18Q96B42 140 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
RHBDD3-202ENST00000406335 IGHV1-58A0A0C4DH39 117 aa13.23□□□□□ -0.29
RHBDD3-202ENST00000406335 ADCYAP1P18509 176 aa13.23□□□□□ -0.29
RHBDD3-202ENST00000406335 REG3GQ6UW15 175 aa13.23□□□□□ -0.29
RHBDD3-202ENST00000406335 PRELID3AQ96N28 172 aa13.23□□□□□ -0.29
RHBDD3-202ENST00000406335 TRAV13-1A0A0B4J241 112 aa13.22□□□□□ -0.29
RHBDD3-202ENST00000406335 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
RHBDD3-202ENST00000406335 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
RHBDD3-202ENST00000406335 FAM104AQ969W3 186 aa13.22□□□□□ -0.29
RHBDD3-202ENST00000406335 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
RHBDD3-202ENST00000406335 A0A0J9YXV3 536 aa13.2□□□□□ -0.3
RHBDD3-202ENST00000406335 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
RHBDD3-202ENST00000406335 SPINK6Q6UWN8 80 aa13.19□□□□□ -0.3
RHBDD3-202ENST00000406335 TNXBP22105 4242 aa13.19□□□□□ -0.3
RHBDD3-202ENST00000406335 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
RHBDD3-202ENST00000406335 LOC389332A0A1B0GUA5 103 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms