RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
DUSP28-202ENST00000405954 LINC00846Q9NV44 126 aa10.41□□□□□ -0.74
DUSP28-202ENST00000405954 RNASE3P12724 160 aaKnown RBP10.41□□□□□ -0.74
DUSP28-202ENST00000405954 PSMB8P28062 276 aa10.41□□□□□ -0.74
DUSP28-202ENST00000405954 F8WDY8 70 aa10.4□□□□□ -0.74
DUSP28-202ENST00000405954 LECT2O14960 151 aa10.4□□□□□ -0.74
DUSP28-202ENST00000405954 LINC00158P58513 81 aa10.4□□□□□ -0.74
DUSP28-202ENST00000405954 ZFAND2AQ8N6M9 145 aa10.4□□□□□ -0.74
DUSP28-202ENST00000405954 UBL5Q9BZL1 73 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 A0A0J9YX75 114 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 TRBV27A0A0K0K1C4 114 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 F8W735 103 aaPredicted RBP10.39□□□□□ -0.75
DUSP28-202ENST00000405954 PAX4O43316 350 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 SLPIP03973 132 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 Q5XG85 94 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 ATP6V0E1O15342 81 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
DUSP28-202ENST00000405954 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
DUSP28-202ENST00000405954 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
DUSP28-202ENST00000405954 CENPEQ02224 2701 aa10.38□□□□□ -0.75
DUSP28-202ENST00000405954 TRBV12-3P01733 135 aa10.38□□□□□ -0.75
DUSP28-202ENST00000405954 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
DUSP28-202ENST00000405954 Q8N2B8 174 aa10.38□□□□□ -0.75
DUSP28-202ENST00000405954 PRORYQ9H606 182 aa10.38□□□□□ -0.75
DUSP28-202ENST00000405954 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
DUSP28-202ENST00000405954 A0A087WW49 117 aa10.37□□□□□ -0.75
DUSP28-202ENST00000405954 MRPL53Q96EL3 112 aaKnown RBP10.37□□□□□ -0.75
DUSP28-202ENST00000405954 MOB4Q9Y3A3 225 aa10.37□□□□□ -0.75
DUSP28-202ENST00000405954 Q6JHZ5 121 aa10.37□□□□□ -0.75
DUSP28-202ENST00000405954 SERP1Q9Y6X1 66 aa10.36□□□□□ -0.75
DUSP28-202ENST00000405954 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
DUSP28-202ENST00000405954 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
DUSP28-202ENST00000405954 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
DUSP28-202ENST00000405954 TIMM17BO60830 172 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 XCL1P47992 114 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 OVOL2Q9BRP0 275 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 CELSR2Q9HCU4 2923 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 TRAV13-2A0A0B4J235 113 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
DUSP28-202ENST00000405954 SPINK13Q1W4C9 94 aa10.34□□□□□ -0.75
DUSP28-202ENST00000405954 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
DUSP28-202ENST00000405954 SOSTDC1Q6X4U4 206 aa10.34□□□□□ -0.75
DUSP28-202ENST00000405954 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
DUSP28-202ENST00000405954 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
DUSP28-202ENST00000405954 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
DUSP28-202ENST00000405954 M0QY20 66 aa10.33□□□□□ -0.76
DUSP28-202ENST00000405954 IGHV1OR15-1A0A075B7D0 117 aa10.33□□□□□ -0.76
DUSP28-202ENST00000405954 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
DUSP28-202ENST00000405954 FAM218AQ96MZ4 157 aa10.33□□□□□ -0.76
DUSP28-202ENST00000405954 LITAFQ99732 161 aa10.33□□□□□ -0.76
DUSP28-202ENST00000405954 NDUFC2-KCTD14E9PQ53 114 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 FAM208BQ5VWN6 2430 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 F8WEM9 126 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 GRNP28799 593 aaKnown RBP10.32□□□□□ -0.76
DUSP28-202ENST00000405954 FAM110DQ8TAY7 271 aaPredicted RBP10.32□□□□□ -0.76
DUSP28-202ENST00000405954 KAAG1Q9UBP8 84 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 UTP20O75691 2785 aaKnown RBP10.32□□□□□ -0.76
DUSP28-202ENST00000405954 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
DUSP28-202ENST00000405954 MED14OSP0DP75 135 aa10.31□□□□□ -0.76
DUSP28-202ENST00000405954 NBL1P41271 181 aa10.31□□□□□ -0.76
DUSP28-202ENST00000405954 LINC01560Q8TB33 94 aa10.31□□□□□ -0.76
DUSP28-202ENST00000405954 PKD1L2Q7Z442 2459 aa10.31□□□□□ -0.76
DUSP28-202ENST00000405954 IGHV3OR16-10A0A075B7F0 116 aa10.31□□□□□ -0.76
DUSP28-202ENST00000405954 NPBQ8NG41 125 aa10.3□□□□□ -0.76
DUSP28-202ENST00000405954 MRPS36P82909 103 aaKnown RBP10.3□□□□□ -0.76
DUSP28-202ENST00000405954 CCDC140Q96MF4 163 aa10.3□□□□□ -0.76
DUSP28-202ENST00000405954 ORMDL1Q9P0S3 153 aa10.3□□□□□ -0.76
DUSP28-202ENST00000405954 UNQ9165/PRO28630Q6UXU0 137 aa10.29□□□□□ -0.76
DUSP28-202ENST00000405954 TMEM86BQ8N661 226 aa10.29□□□□□ -0.76
DUSP28-202ENST00000405954 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
DUSP28-202ENST00000405954 LAMTOR3Q9UHA4 124 aa10.29□□□□□ -0.76
DUSP28-202ENST00000405954 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 MUC4Q99102 2169 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 PROK1P58294 105 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 RMI2Q96E14 147 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 LINC01600Q96MT4 127 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 A0A087WYN8 130 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 NDUFA1O15239 70 aa10.28□□□□□ -0.76
DUSP28-202ENST00000405954 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.76
DUSP28-202ENST00000405954 LINC00315P59091 139 aa10.27□□□□□ -0.76
DUSP28-202ENST00000405954 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.76
DUSP28-202ENST00000405954 MIR7-3HGQ8N6C7 128 aa10.27□□□□□ -0.76
DUSP28-202ENST00000405954 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.76
DUSP28-202ENST00000405954 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
DUSP28-202ENST00000405954 MYO18BQ8IUG5 2567 aa10.27□□□□□ -0.77
DUSP28-202ENST00000405954 IGHV3OR16-12A0A075B7B8 117 aa10.27□□□□□ -0.77
DUSP28-202ENST00000405954 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
DUSP28-202ENST00000405954 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.77
DUSP28-202ENST00000405954 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
DUSP28-202ENST00000405954 E7EQL1 145 aa10.26□□□□□ -0.77
DUSP28-202ENST00000405954 MINOS1Q5TGZ0 78 aa10.26□□□□□ -0.77
DUSP28-202ENST00000405954 H0YGX0 51 aa10.26□□□□□ -0.77
DUSP28-202ENST00000405954 UBE2L6O14933 153 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms