RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 NDUFA5Q16718 116 aa13.68□□□□□ -0.22
PDGFA-204ENST00000405692 RAB5AP20339 215 aa13.67□□□□□ -0.22
PDGFA-204ENST00000405692 KRTAP10-1P60331 282 aa13.67□□□□□ -0.22
PDGFA-204ENST00000405692 CLRN3Q8NCR9 226 aa13.67□□□□□ -0.22
PDGFA-204ENST00000405692 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
PDGFA-204ENST00000405692 CSDC2Q9Y534 153 aaKnown RBP13.67□□□□□ -0.22
PDGFA-204ENST00000405692 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
PDGFA-204ENST00000405692 MAP1LC3AQ9H492 121 aa13.66□□□□□ -0.22
PDGFA-204ENST00000405692 PRSS47A8MTI9 375 aa13.65□□□□□ -0.22
PDGFA-204ENST00000405692 TIMM21Q9BVV7 248 aa13.65□□□□□ -0.22
PDGFA-204ENST00000405692 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
PDGFA-204ENST00000405692 COX19Q49B96 90 aa13.64□□□□□ -0.23
PDGFA-204ENST00000405692 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
PDGFA-204ENST00000405692 GAGE12HA6NDE8 117 aa13.63□□□□□ -0.23
PDGFA-204ENST00000405692 SS18Q15532 418 aa13.63□□□□□ -0.23
PDGFA-204ENST00000405692 CFAP161Q6P656 301 aa13.63□□□□□ -0.23
PDGFA-204ENST00000405692 CHCHD10Q8WYQ3 142 aaPredicted RBP13.63□□□□□ -0.23
PDGFA-204ENST00000405692 SNAPINO95295 136 aa13.62□□□□□ -0.23
PDGFA-204ENST00000405692 APOC3P02656 99 aa13.62□□□□□ -0.23
PDGFA-204ENST00000405692 SVBPQ8N300 66 aa13.62□□□□□ -0.23
PDGFA-204ENST00000405692 GNB1LQ9BYB4 327 aa13.62□□□□□ -0.23
PDGFA-204ENST00000405692 LINC00959A0A1B0GUT2 108 aa13.61□□□□□ -0.23
PDGFA-204ENST00000405692 CCL25O15444 150 aa13.61□□□□□ -0.23
PDGFA-204ENST00000405692 KIAA1109Q2LD37 5005 aa13.6□□□□□ -0.23
PDGFA-204ENST00000405692 LOC389332A0A1B0GUA5 103 aa13.6□□□□□ -0.23
PDGFA-204ENST00000405692 PRSS1P07477 247 aa13.6□□□□□ -0.23
PDGFA-204ENST00000405692 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
PDGFA-204ENST00000405692 LRP1BQ9NZR2 4599 aa13.59□□□□□ -0.23
PDGFA-204ENST00000405692 K7EMI3 77 aa13.59□□□□□ -0.23
PDGFA-204ENST00000405692 Q8N8P6 123 aa13.59□□□□□ -0.23
PDGFA-204ENST00000405692 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
PDGFA-204ENST00000405692 hDV102S1A0JD36 115 aa13.58□□□□□ -0.24
PDGFA-204ENST00000405692 MT-ND6P03923 174 aa13.58□□□□□ -0.24
PDGFA-204ENST00000405692 NXT2Q9NPJ8 142 aaKnown RBP13.58□□□□□ -0.24
PDGFA-204ENST00000405692 C1orf196B1AJZ1 125 aa13.57□□□□□ -0.24
PDGFA-204ENST00000405692 XCL1P47992 114 aa13.57□□□□□ -0.24
PDGFA-204ENST00000405692 RPL39P62891 51 aaKnown RBP13.57□□□□□ -0.24
PDGFA-204ENST00000405692 DNAH5Q8TE73 4624 aa13.57□□□□□ -0.24
PDGFA-204ENST00000405692 IFI27P40305 119 aaPredicted RBP13.56□□□□□ -0.24
PDGFA-204ENST00000405692 XGP55808 180 aa13.56□□□□□ -0.24
PDGFA-204ENST00000405692 ORMDL2Q53FV1 153 aa13.56□□□□□ -0.24
PDGFA-204ENST00000405692 CD164L2Q6UWJ8 174 aa13.56□□□□□ -0.24
PDGFA-204ENST00000405692 HERC2O95714 4834 aa13.56□□□□□ -0.24
PDGFA-204ENST00000405692 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.55□□□□□ -0.24
PDGFA-204ENST00000405692 G0S2P27469 103 aa13.55□□□□□ -0.24
PDGFA-204ENST00000405692 MRPS36P82909 103 aaKnown RBP13.55□□□□□ -0.24
PDGFA-204ENST00000405692 FOXI1Q12951 378 aa13.55□□□□□ -0.24
PDGFA-204ENST00000405692 Q6ZUT4 128 aa13.55□□□□□ -0.24
PDGFA-204ENST00000405692 CNBPP62633 177 aaKnown RBP13.54□□□□□ -0.24
PDGFA-204ENST00000405692 KIAA1644Q3SXP7 199 aa13.54□□□□□ -0.24
PDGFA-204ENST00000405692 Q8N1X5 172 aa13.54□□□□□ -0.24
PDGFA-204ENST00000405692 PYGO1Q9Y3Y4 419 aa13.54□□□□□ -0.24
PDGFA-204ENST00000405692 LINC01620Q4KN68 170 aa13.53□□□□□ -0.24
PDGFA-204ENST00000405692 RNASE13Q5GAN3 156 aaKnown RBP13.53□□□□□ -0.24
PDGFA-204ENST00000405692 C9orf163Q8N9P6 203 aa13.53□□□□□ -0.24
PDGFA-204ENST00000405692 KRTAP17-1Q9BYP8 105 aa13.53□□□□□ -0.24
PDGFA-204ENST00000405692 CYSLTR1Q9Y271 337 aa13.53□□□□□ -0.24
PDGFA-204ENST00000405692 TRAV13-1A0A0B4J241 112 aa13.52□□□□□ -0.25
PDGFA-204ENST00000405692 Q6ZSA8 131 aa13.52□□□□□ -0.25
PDGFA-204ENST00000405692 C15orf56Q8N910 161 aa13.52□□□□□ -0.25
PDGFA-204ENST00000405692 IGHV1-58A0A0C4DH39 117 aa13.51□□□□□ -0.25
PDGFA-204ENST00000405692 FABP9Q0Z7S8 132 aa13.51□□□□□ -0.25
PDGFA-204ENST00000405692 MRPL18Q9H0U6 180 aaKnown RBP13.51□□□□□ -0.25
PDGFA-204ENST00000405692 FAM30AQ9NZY2 134 aa13.51□□□□□ -0.25
PDGFA-204ENST00000405692 RYR1P21817 5038 aa13.5□□□□□ -0.25
PDGFA-204ENST00000405692 C2orf66Q6UXQ4 117 aa13.5□□□□□ -0.25
PDGFA-204ENST00000405692 PRSS3P2Q8NHM4 247 aa13.5□□□□□ -0.25
PDGFA-204ENST00000405692 GVQW2A0A096LPI5 108 aaPredicted RBP13.49□□□□□ -0.25
PDGFA-204ENST00000405692 MALP21145 153 aa13.49□□□□□ -0.25
PDGFA-204ENST00000405692 ALKBH7Q9BT30 221 aaPredicted RBP13.49□□□□□ -0.25
PDGFA-204ENST00000405692 TGIF2-C20orf24A0A0A6YYL0 155 aa13.48□□□□□ -0.25
PDGFA-204ENST00000405692 IFITM10A6NMD0 228 aa13.48□□□□□ -0.25
PDGFA-204ENST00000405692 COX7A2LO14548 114 aa13.48□□□□□ -0.25
PDGFA-204ENST00000405692 HIGD2BQ4VC39 106 aa13.48□□□□□ -0.25
PDGFA-204ENST00000405692 TMEM141Q96I45 108 aa13.48□□□□□ -0.25
PDGFA-204ENST00000405692 NPSP0C0P6 89 aa13.47□□□□□ -0.25
PDGFA-204ENST00000405692 Q6ZN92 141 aa13.47□□□□□ -0.25
PDGFA-204ENST00000405692 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
PDGFA-204ENST00000405692 TRAPPC1Q9Y5R8 145 aa13.47□□□□□ -0.25
PDGFA-204ENST00000405692 IGHV3-64A0A075B6Q5 118 aa13.46□□□□□ -0.25
PDGFA-204ENST00000405692 IGLV4-3A0A075B6K6 122 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 LINC01549A6NIU2 74 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 EPM2AB3EWF7 344 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 APOMO95445 188 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 PAPPA-AS1Q5QFB9 102 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 TEX43Q6ZNM6 134 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 FAM104AQ969W3 186 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
PDGFA-204ENST00000405692 HAMPP81172 84 aa13.44□□□□□ -0.26
PDGFA-204ENST00000405692 CHAC1Q9BUX1 264 aa13.44□□□□□ -0.26
PDGFA-204ENST00000405692 APOBP04114 4563 aaKnown RBP13.43□□□□□ -0.26
PDGFA-204ENST00000405692 FAM229AH3BQW9 127 aa13.43□□□□□ -0.26
PDGFA-204ENST00000405692 SLPIP03973 132 aa13.43□□□□□ -0.26
PDGFA-204ENST00000405692 VCX2Q9H322 139 aa13.43□□□□□ -0.26
PDGFA-204ENST00000405692 SMCO4Q9NRQ5 59 aa13.43□□□□□ -0.26
PDGFA-204ENST00000405692 PKIGQ9Y2B9 76 aa13.43□□□□□ -0.26
PDGFA-204ENST00000405692 HSPG2P98160 4391 aa13.42□□□□□ -0.26
PDGFA-204ENST00000405692 SDIM1Q6ZPB5 146 aa13.42□□□□□ -0.26
PDGFA-204ENST00000405692 FA2HQ7L5A8 372 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms