RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 IGKV3OR2-268A0A0C4DH90 116 aa2.57□□□□□ -2
RTN4-208ENST00000404909 hDV102S1A0JD36 115 aa2.57□□□□□ -2
RTN4-208ENST00000404909 PCP4L1A6NKN8 68 aa2.57□□□□□ -2
RTN4-208ENST00000404909 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
RTN4-208ENST00000404909 Q6ZUT4 128 aa2.57□□□□□ -2
RTN4-208ENST00000404909 MRPL52Q86TS9 123 aaKnown RBP2.57□□□□□ -2
RTN4-208ENST00000404909 OR5A1Q8NGJ0 315 aa2.57□□□□□ -2
RTN4-208ENST00000404909 SPANXA1Q9NS26 97 aa2.57□□□□□ -2
RTN4-208ENST00000404909 A0A087WX48 190 aa2.57□□□□□ -2
RTN4-208ENST00000404909 IGLL5B9A064 214 aa2.57□□□□□ -2
RTN4-208ENST00000404909 NHLRC4P0CG21 123 aaPredicted RBP2.57□□□□□ -2
RTN4-208ENST00000404909 PMVKQ15126 192 aa2.57□□□□□ -2
RTN4-208ENST00000404909 TMEM97Q5BJF2 176 aa2.57□□□□□ -2
RTN4-208ENST00000404909 TEX43Q6ZNM6 134 aa2.57□□□□□ -2
RTN4-208ENST00000404909 UBE2DNLQ8IWF7 75 aa2.57□□□□□ -2
RTN4-208ENST00000404909 STPG4Q8N801 248 aa2.57□□□□□ -2
RTN4-208ENST00000404909 TMEM101Q96IK0 257 aa2.57□□□□□ -2
RTN4-208ENST00000404909 C2orf88Q9BSF0 95 aa2.57□□□□□ -2
RTN4-208ENST00000404909 KRTAP3-3Q9BYR6 98 aa2.57□□□□□ -2
RTN4-208ENST00000404909 KRTAP3-2Q9BYR7 98 aa2.57□□□□□ -2
RTN4-208ENST00000404909 PRO1933Q9H354 126 aa2.57□□□□□ -2
RTN4-208ENST00000404909 CST9LQ9H4G1 147 aa2.57□□□□□ -2
RTN4-208ENST00000404909 HSBP1L1C9JCN9 74 aa2.57□□□□□ -2
RTN4-208ENST00000404909 DPM2O94777 84 aa2.57□□□□□ -2
RTN4-208ENST00000404909 PAPPA-AS1Q5QFB9 102 aa2.57□□□□□ -2
RTN4-208ENST00000404909 SH2D6Q7Z4S9 175 aa2.57□□□□□ -2
RTN4-208ENST00000404909 PYGO1Q9Y3Y4 419 aa2.57□□□□□ -2
RTN4-208ENST00000404909 TRAV9-2A0A087WT02 112 aa2.56□□□□□ -2
RTN4-208ENST00000404909 TRAV13-1A0A0B4J241 112 aa2.56□□□□□ -2
RTN4-208ENST00000404909 LINC00587B1AMM8 73 aa2.56□□□□□ -2
RTN4-208ENST00000404909 F8VRH5 84 aa2.56□□□□□ -2
RTN4-208ENST00000404909 IGKCP01834 107 aa2.56□□□□□ -2
RTN4-208ENST00000404909 SPATA45Q537H7 98 aa2.56□□□□□ -2
RTN4-208ENST00000404909 LYPD5Q6UWN5 251 aa2.56□□□□□ -2
RTN4-208ENST00000404909 ZNF664Q8N3J9 261 aa2.56□□□□□ -2
RTN4-208ENST00000404909 Q8N3U1 123 aa2.56□□□□□ -2
RTN4-208ENST00000404909 FAM104AQ969W3 186 aa2.56□□□□□ -2
RTN4-208ENST00000404909 LYSTQ99698 3801 aa2.56□□□□□ -2
RTN4-208ENST00000404909 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
RTN4-208ENST00000404909 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
RTN4-208ENST00000404909 TRAV12-1A0A0B4J245 112 aa2.56□□□□□ -2
RTN4-208ENST00000404909 SMAGPQ0VAQ4 97 aa2.56□□□□□ -2
RTN4-208ENST00000404909 MPV17L2Q567V2 206 aa2.56□□□□□ -2
RTN4-208ENST00000404909 CLPSL2Q6UWE3 100 aa2.56□□□□□ -2
RTN4-208ENST00000404909 A0A0J9YXV3 536 aa2.56□□□□□ -2
RTN4-208ENST00000404909 H3BNG1 76 aa2.56□□□□□ -2
RTN4-208ENST00000404909 PLNP26678 52 aa2.56□□□□□ -2
RTN4-208ENST00000404909 TMEM170BQ5T4T1 132 aa2.56□□□□□ -2
RTN4-208ENST00000404909 CDC42SE2Q9NRR3 84 aa2.56□□□□□ -2
RTN4-208ENST00000404909 IGLV4-69A0A075B6H9 119 aa2.55□□□□□ -2
RTN4-208ENST00000404909 C11orf86A6NJI1 115 aa2.55□□□□□ -2
RTN4-208ENST00000404909 H7C423 109 aa2.55□□□□□ -2
RTN4-208ENST00000404909 RBX1P62877 108 aa2.55□□□□□ -2
RTN4-208ENST00000404909 ESRGQ1W209 222 aa2.55□□□□□ -2
RTN4-208ENST00000404909 LELP1Q5T871 98 aa2.55□□□□□ -2
RTN4-208ENST00000404909 C14orf144Q96I85 54 aa2.55□□□□□ -2
RTN4-208ENST00000404909 CHAC1Q9BUX1 264 aa2.55□□□□□ -2
RTN4-208ENST00000404909 TIMM21Q9BVV7 248 aa2.55□□□□□ -2
RTN4-208ENST00000404909 TRAV8-6A0A0B4J262 113 aa2.55□□□□□ -2
RTN4-208ENST00000404909 ANGP03950 147 aaKnown RBP2.55□□□□□ -2
RTN4-208ENST00000404909 ZNF25P17030 456 aaPredicted RBP2.55□□□□□ -2
RTN4-208ENST00000404909 NMUP48645 174 aa2.55□□□□□ -2
RTN4-208ENST00000404909 MRPS36P82909 103 aaKnown RBP2.55□□□□□ -2
RTN4-208ENST00000404909 AMELXQ99217 191 aa2.55□□□□□ -2
RTN4-208ENST00000404909 CSDC2Q9Y534 153 aaKnown RBP2.55□□□□□ -2
RTN4-208ENST00000404909 IGHV3-64A0A075B6Q5 118 aa2.55□□□□□ -2
RTN4-208ENST00000404909 TSTD3H0UI37 97 aa2.55□□□□□ -2
RTN4-208ENST00000404909 IGHV3-30P01768 117 aa2.55□□□□□ -2
RTN4-208ENST00000404909 IGHV3-33P01772 117 aa2.55□□□□□ -2
RTN4-208ENST00000404909 IGHV3-30-3P0DP02 117 aa2.55□□□□□ -2
RTN4-208ENST00000404909 IGHV3-30-5P0DP03 117 aa2.55□□□□□ -2
RTN4-208ENST00000404909 WFDC10BQ8IUB3 73 aa2.55□□□□□ -2
RTN4-208ENST00000404909 LINC00269Q8N2A0 174 aa2.55□□□□□ -2
RTN4-208ENST00000404909 C15orf53Q8NAA6 179 aa2.55□□□□□ -2
RTN4-208ENST00000404909 GEMIN7Q9H840 131 aaKnown RBP2.55□□□□□ -2
RTN4-208ENST00000404909 PLECQ15149 4684 aaKnown RBP2.54□□□□□ -2
RTN4-208ENST00000404909 NPSP0C0P6 89 aa2.54□□□□□ -2
RTN4-208ENST00000404909 PKIAP61925 76 aa2.54□□□□□ -2
RTN4-208ENST00000404909 TP73-AS1Q9UF72 201 aa2.54□□□□□ -2
RTN4-208ENST00000404909 DNAH7Q8WXX0 4024 aa2.54□□□□□ -2
RTN4-208ENST00000404909 UBE2D1P51668 147 aa2.54□□□□□ -2
RTN4-208ENST00000404909 KLK12Q9UKR0 248 aa2.54□□□□□ -2
RTN4-208ENST00000404909 IGLV10-54A0A075B6I4 117 aa2.54□□□□□ -2
RTN4-208ENST00000404909 A0A1B0GUV1 79 aa2.54□□□□□ -2
RTN4-208ENST00000404909 CCL18P55774 89 aa2.54□□□□□ -2
RTN4-208ENST00000404909 COX6A2Q02221 97 aa2.54□□□□□ -2
RTN4-208ENST00000404909 DPH3Q96FX2 82 aa2.54□□□□□ -2
RTN4-208ENST00000404909 TTTY13Q9BZ97 58 aa2.54□□□□□ -2
RTN4-208ENST00000404909 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
RTN4-208ENST00000404909 IGKV2D-26A0A0A0MRZ7 120 aa2.53□□□□□ -2
RTN4-208ENST00000404909 IGLC3P0DOY3 106 aa2.53□□□□□ -2
RTN4-208ENST00000404909 ZNF22P17026 224 aaPredicted RBP2.53□□□□□ -2
RTN4-208ENST00000404909 XCL1P47992 114 aa2.53□□□□□ -2
RTN4-208ENST00000404909 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
RTN4-208ENST00000404909 ZFAND6Q6FIF0 208 aa2.53□□□□□ -2
RTN4-208ENST00000404909 TINCRA0A1B0GVN0 87 aa2.53□□□□□ -2
RTN4-208ENST00000404909 SPINK8P0C7L1 97 aa2.53□□□□□ -2
RTN4-208ENST00000404909 TIRAPP58753 221 aa2.53□□□□□ -2
RTN4-208ENST00000404909 HERVK_113P61574 105 aa2.53□□□□□ -2
RTN4-208ENST00000404909 REG3AQ06141 175 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms