RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 CDC42SE2Q9NRR3 84 aa11.41□□□□□ -0.58
PTCHD3P3-201ENST00000403073 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
PTCHD3P3-201ENST00000403073 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
PTCHD3P3-201ENST00000403073 PKD1P98161 4303 aa11.39□□□□□ -0.59
PTCHD3P3-201ENST00000403073 SCO1O75880 301 aa11.39□□□□□ -0.59
PTCHD3P3-201ENST00000403073 ZNF664Q8N3J9 261 aa11.39□□□□□ -0.59
PTCHD3P3-201ENST00000403073 TRAV8-4A0A0B4J246 113 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 EREGO14944 169 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 LECT2O14960 151 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 SMAGPQ0VAQ4 97 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 WFDC2Q14508 124 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 KRTAP26-1Q6PEX3 210 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 TIMM21Q9BVV7 248 aa11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
PTCHD3P3-201ENST00000403073 DNAH11Q96DT5 4516 aa11.37□□□□□ -0.59
PTCHD3P3-201ENST00000403073 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTCHD3P3-201ENST00000403073 KRTAP10-2P60368 255 aa11.37□□□□□ -0.59
PTCHD3P3-201ENST00000403073 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
PTCHD3P3-201ENST00000403073 RNASE13Q5GAN3 156 aaKnown RBP11.37□□□□□ -0.59
PTCHD3P3-201ENST00000403073 OPRPNQ99935 248 aaPredicted RBP11.37□□□□□ -0.59
PTCHD3P3-201ENST00000403073 COLCA2A8K830 154 aa11.36□□□□□ -0.59
PTCHD3P3-201ENST00000403073 K7EMI3 77 aa11.36□□□□□ -0.59
PTCHD3P3-201ENST00000403073 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
PTCHD3P3-201ENST00000403073 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
PTCHD3P3-201ENST00000403073 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
PTCHD3P3-201ENST00000403073 Q6ZUT4 128 aa11.35□□□□□ -0.59
PTCHD3P3-201ENST00000403073 C18orf32Q8TCD1 76 aa11.35□□□□□ -0.59
PTCHD3P3-201ENST00000403073 SPANXA1Q9NS26 97 aa11.35□□□□□ -0.59
PTCHD3P3-201ENST00000403073 HECTD4Q9Y4D8 3996 aa11.35□□□□□ -0.59
PTCHD3P3-201ENST00000403073 Q8N814 137 aa11.34□□□□□ -0.59
PTCHD3P3-201ENST00000403073 CHCHD10Q8WYQ3 142 aaPredicted RBP11.34□□□□□ -0.59
PTCHD3P3-201ENST00000403073 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
PTCHD3P3-201ENST00000403073 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
PTCHD3P3-201ENST00000403073 LINC01546A6NGU7 62 aa11.33□□□□□ -0.6
PTCHD3P3-201ENST00000403073 FA2HQ7L5A8 372 aa11.33□□□□□ -0.6
PTCHD3P3-201ENST00000403073 TRGC2P03986 189 aa11.32□□□□□ -0.6
PTCHD3P3-201ENST00000403073 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
PTCHD3P3-201ENST00000403073 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
PTCHD3P3-201ENST00000403073 TRAV13-1A0A0B4J241 112 aa11.31□□□□□ -0.6
PTCHD3P3-201ENST00000403073 CCL25O15444 150 aa11.31□□□□□ -0.6
PTCHD3P3-201ENST00000403073 XCL1P47992 114 aa11.31□□□□□ -0.6
PTCHD3P3-201ENST00000403073 MRPS36P82909 103 aaKnown RBP11.31□□□□□ -0.6
PTCHD3P3-201ENST00000403073 SS18Q15532 418 aa11.31□□□□□ -0.6
PTCHD3P3-201ENST00000403073 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
PTCHD3P3-201ENST00000403073 IGLV4-3A0A075B6K6 122 aa11.3□□□□□ -0.6
PTCHD3P3-201ENST00000403073 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
PTCHD3P3-201ENST00000403073 LINC00614P0C842 121 aa11.3□□□□□ -0.6
PTCHD3P3-201ENST00000403073 G0S2P27469 103 aa11.3□□□□□ -0.6
PTCHD3P3-201ENST00000403073 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
PTCHD3P3-201ENST00000403073 C16orf90A8MZG2 172 aa11.29□□□□□ -0.6
PTCHD3P3-201ENST00000403073 FOXI1Q12951 378 aa11.29□□□□□ -0.6
PTCHD3P3-201ENST00000403073 TOMM6Q96B49 74 aa11.29□□□□□ -0.6
PTCHD3P3-201ENST00000403073 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.28□□□□□ -0.6
PTCHD3P3-201ENST00000403073 C1orf196B1AJZ1 125 aa11.28□□□□□ -0.6
PTCHD3P3-201ENST00000403073 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
PTCHD3P3-201ENST00000403073 ZC2HC1BQ5TFG8 222 aa11.28□□□□□ -0.6
PTCHD3P3-201ENST00000403073 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
PTCHD3P3-201ENST00000403073 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
PTCHD3P3-201ENST00000403073 SCGB3A1Q96QR1 104 aa11.27□□□□□ -0.61
PTCHD3P3-201ENST00000403073 BIRC6Q9NR09 4857 aa11.27□□□□□ -0.61
PTCHD3P3-201ENST00000403073 IGLV5-52A0A0A0MRZ9 124 aa11.26□□□□□ -0.61
PTCHD3P3-201ENST00000403073 IFITM10A6NMD0 228 aa11.26□□□□□ -0.61
PTCHD3P3-201ENST00000403073 S100A1P23297 94 aa11.26□□□□□ -0.61
PTCHD3P3-201ENST00000403073 RAB5BP61020 215 aa11.26□□□□□ -0.61
PTCHD3P3-201ENST00000403073 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
PTCHD3P3-201ENST00000403073 DYNC1H1Q14204 4646 aaKnown RBP11.26□□□□□ -0.61
PTCHD3P3-201ENST00000403073 PRSS1P07477 247 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 PMCHL1Q16048 86 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 C14orf177Q52M58 125 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 CDPF1Q6NVV7 123 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 ERASQ7Z444 233 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 NTN5Q8WTR8 489 aaPredicted RBP11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 VCX2Q9H322 139 aa11.25□□□□□ -0.61
PTCHD3P3-201ENST00000403073 Q6ZN92 141 aa11.24□□□□□ -0.61
PTCHD3P3-201ENST00000403073 TIMM17AQ99595 171 aa11.24□□□□□ -0.61
PTCHD3P3-201ENST00000403073 A0A096LNJ9 63 aa11.23□□□□□ -0.61
PTCHD3P3-201ENST00000403073 NPSP0C0P6 89 aa11.23□□□□□ -0.61
PTCHD3P3-201ENST00000403073 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
PTCHD3P3-201ENST00000403073 BAGE3Q86Y29 109 aa11.23□□□□□ -0.61
PTCHD3P3-201ENST00000403073 C15orf56Q8N910 161 aa11.23□□□□□ -0.61
PTCHD3P3-201ENST00000403073 AMELXQ99217 191 aa11.23□□□□□ -0.61
PTCHD3P3-201ENST00000403073 CFAP161Q6P656 301 aa11.22□□□□□ -0.61
PTCHD3P3-201ENST00000403073 PKHD1P08F94 4074 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 hDV102S1A0JD36 115 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 LINC01549A6NIU2 74 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 GCSHP23434 173 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 UBE2D1P51668 147 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 HIGD2BQ4VC39 106 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 CHCHD1Q96BP2 118 aaKnown RBP11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.61
PTCHD3P3-201ENST00000403073 COX7A2LO14548 114 aa11.2□□□□□ -0.62
PTCHD3P3-201ENST00000403073 HBDP02042 147 aa11.2□□□□□ -0.62
PTCHD3P3-201ENST00000403073 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
PTCHD3P3-201ENST00000403073 COX6A2Q02221 97 aa11.2□□□□□ -0.62
PTCHD3P3-201ENST00000403073 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
PTCHD3P3-201ENST00000403073 LINC00242Q5T6M2 205 aa11.2□□□□□ -0.62
PTCHD3P3-201ENST00000403073 MALP21145 153 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms