RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 LINC01546A6NGU7 62 aa10.95□□□□□ -0.66
COL25A1-201ENST00000399126 H3BS24 57 aa10.95□□□□□ -0.66
COL25A1-201ENST00000399126 ANK2Q01484 3957 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 SNCGO76070 127 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 NMUP48645 174 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 LGALS9BQ3B8N2 356 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 EMP1P54849 157 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 CHAC1Q9BUX1 264 aa10.94□□□□□ -0.66
COL25A1-201ENST00000399126 CMC4P56277 68 aaPredicted RBP10.93□□□□□ -0.66
COL25A1-201ENST00000399126 MORN3Q6PF18 240 aaPredicted RBP10.93□□□□□ -0.66
COL25A1-201ENST00000399126 CEND1Q8N111 149 aa10.93□□□□□ -0.66
COL25A1-201ENST00000399126 M0R2P5 195 aa10.93□□□□□ -0.66
COL25A1-201ENST00000399126 RRN3P1Q2M238 152 aa10.93□□□□□ -0.66
COL25A1-201ENST00000399126 C9orf66Q5T8R8 295 aa10.93□□□□□ -0.66
COL25A1-201ENST00000399126 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
COL25A1-201ENST00000399126 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 LINC00467Q9BRT7 94 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 CARD19Q96LW7 228 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 M0QY20 66 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 P0DMU3 169 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 FAM231AP0DMU4 169 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 FAM231CP0DMU5 169 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 FCER1GP30273 86 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 TEN1Q86WV5 123 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 Q9UF83 564 aa10.92□□□□□ -0.66
COL25A1-201ENST00000399126 LAGE3Q14657 143 aa10.91□□□□□ -0.66
COL25A1-201ENST00000399126 C12orf74Q32Q52 190 aa10.91□□□□□ -0.66
COL25A1-201ENST00000399126 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
COL25A1-201ENST00000399126 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
COL25A1-201ENST00000399126 Q6ZSN1 163 aa10.91□□□□□ -0.66
COL25A1-201ENST00000399126 LINC00694P0DN24 101 aa10.9□□□□□ -0.66
COL25A1-201ENST00000399126 GTSCR1Q86UQ5 136 aa10.9□□□□□ -0.66
COL25A1-201ENST00000399126 J3KT08 172 aa10.9□□□□□ -0.67
COL25A1-201ENST00000399126 IFI27L1Q96BM0 104 aa10.89□□□□□ -0.67
COL25A1-201ENST00000399126 SDHAF1A6NFY7 115 aa10.88□□□□□ -0.67
COL25A1-201ENST00000399126 POLR2KP53803 58 aaKnown RBP10.88□□□□□ -0.67
COL25A1-201ENST00000399126 TRGV1A0A0A0MS02 117 aa10.88□□□□□ -0.67
COL25A1-201ENST00000399126 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
COL25A1-201ENST00000399126 C9JAW5 83 aa10.88□□□□□ -0.67
COL25A1-201ENST00000399126 Q6ZTI0 123 aa10.88□□□□□ -0.67
COL25A1-201ENST00000399126 TMEM263Q8WUH6 116 aaKnown RBP10.87□□□□□ -0.67
COL25A1-201ENST00000399126 NOTCH1P46531 2555 aa10.87□□□□□ -0.67
COL25A1-201ENST00000399126 PLAC8L1A1L4L8 177 aa10.87□□□□□ -0.67
COL25A1-201ENST00000399126 WFDC9Q8NEX5 89 aa10.87□□□□□ -0.67
COL25A1-201ENST00000399126 FAM236DA0A1B0GTK5 79 aa10.86□□□□□ -0.67
COL25A1-201ENST00000399126 A8MWV9 139 aa10.86□□□□□ -0.67
COL25A1-201ENST00000399126 FAM236CP0DP71 79 aa10.86□□□□□ -0.67
COL25A1-201ENST00000399126 HRCT1Q6UXD1 115 aa10.86□□□□□ -0.67
COL25A1-201ENST00000399126 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
COL25A1-201ENST00000399126 PPP1R17O96001 155 aa10.86□□□□□ -0.67
COL25A1-201ENST00000399126 A0A1B0GX51 115 aa10.85□□□□□ -0.67
COL25A1-201ENST00000399126 DKK2Q9UBU2 259 aa10.85□□□□□ -0.67
COL25A1-201ENST00000399126 IGHV3-53P01767 116 aa10.85□□□□□ -0.67
COL25A1-201ENST00000399126 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
COL25A1-201ENST00000399126 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
COL25A1-201ENST00000399126 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
COL25A1-201ENST00000399126 ORMDL2Q53FV1 153 aa10.84□□□□□ -0.67
COL25A1-201ENST00000399126 C3orf56Q8N813 242 aa10.84□□□□□ -0.67
COL25A1-201ENST00000399126 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 C2orf66Q6UXQ4 117 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 EDA2RQ9HAV5 297 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 VCYO14598 125 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 RPL39P62891 51 aaKnown RBP10.83□□□□□ -0.68
COL25A1-201ENST00000399126 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 SERTAD4-AS1Q5TG53 156 aa10.83□□□□□ -0.68
COL25A1-201ENST00000399126 PRSS1P07477 247 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 K7EMI3 77 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 NBEAL1Q6ZS30 2694 aa10.82□□□□□ -0.68
COL25A1-201ENST00000399126 DNAH3Q8TD57 4116 aa10.81□□□□□ -0.68
COL25A1-201ENST00000399126 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
COL25A1-201ENST00000399126 TSHBP01222 138 aa10.81□□□□□ -0.68
COL25A1-201ENST00000399126 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
COL25A1-201ENST00000399126 LYRM7Q5U5X0 104 aa10.8□□□□□ -0.68
COL25A1-201ENST00000399126 SBSPONQ8IVN8 264 aa10.8□□□□□ -0.68
COL25A1-201ENST00000399126 NEXN-AS1Q8NBZ9 246 aa10.8□□□□□ -0.68
COL25A1-201ENST00000399126 PSMB2P49721 201 aa10.8□□□□□ -0.68
COL25A1-201ENST00000399126 RPS28P62857 69 aaKnown RBP10.8□□□□□ -0.68
COL25A1-201ENST00000399126 DAZ2Q13117 558 aaKnown RBP10.8□□□□□ -0.68
COL25A1-201ENST00000399126 DEFB135Q30KP9 77 aa10.8□□□□□ -0.68
COL25A1-201ENST00000399126 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
COL25A1-201ENST00000399126 H7C1H1 209 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 ATP5LO75964 103 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 VPREB1P12018 145 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 ZC2HC1BQ5TFG8 222 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 X6R8D5 127 aa10.79□□□□□ -0.68
COL25A1-201ENST00000399126 ANKRD29Q8N6D5 301 aa10.78□□□□□ -0.68
COL25A1-201ENST00000399126 I3L3M4 83 aa10.78□□□□□ -0.68
COL25A1-201ENST00000399126 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms