RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 RMI2Q96E14 147 aa11.56□□□□□ -0.56
CSNK1D-204ENST00000398519 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
CSNK1D-204ENST00000398519 TM2D2Q9BX73 214 aa11.56□□□□□ -0.56
CSNK1D-204ENST00000398519 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
CSNK1D-204ENST00000398519 PSCAO43653 123 aa11.55□□□□□ -0.56
CSNK1D-204ENST00000398519 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
CSNK1D-204ENST00000398519 DGAT2L7PQ6IED9 249 aa11.55□□□□□ -0.56
CSNK1D-204ENST00000398519 C1orf43Q9BWL3 253 aa11.55□□□□□ -0.56
CSNK1D-204ENST00000398519 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 SPANXA1Q9NS26 97 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 EPPK1P58107 5090 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 DNAH11Q96DT5 4516 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 Q6ZUT4 128 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 MAPKAPK5-AS1Q8N8E1 139 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 COX11Q9Y6N1 276 aa11.54□□□□□ -0.56
CSNK1D-204ENST00000398519 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
CSNK1D-204ENST00000398519 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-204ENST00000398519 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
CSNK1D-204ENST00000398519 A0A1B0GVY2 172 aa11.52□□□□□ -0.57
CSNK1D-204ENST00000398519 KRTAP26-1Q6PEX3 210 aa11.52□□□□□ -0.57
CSNK1D-204ENST00000398519 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
CSNK1D-204ENST00000398519 LRCOL1A6NCL2 159 aa11.51□□□□□ -0.57
CSNK1D-204ENST00000398519 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-204ENST00000398519 PYGO1Q9Y3Y4 419 aa11.51□□□□□ -0.57
CSNK1D-204ENST00000398519 A0A087WTM6 91 aa11.5□□□□□ -0.57
CSNK1D-204ENST00000398519 LINC00614P0C842 121 aa11.5□□□□□ -0.57
CSNK1D-204ENST00000398519 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
CSNK1D-204ENST00000398519 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
CSNK1D-204ENST00000398519 TOMM6Q96B49 74 aa11.5□□□□□ -0.57
CSNK1D-204ENST00000398519 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
CSNK1D-204ENST00000398519 G0S2P27469 103 aa11.49□□□□□ -0.57
CSNK1D-204ENST00000398519 WFDC2Q14508 124 aa11.49□□□□□ -0.57
CSNK1D-204ENST00000398519 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
CSNK1D-204ENST00000398519 IGIPA6NJ69 53 aa11.48□□□□□ -0.57
CSNK1D-204ENST00000398519 BAALCQ8WXS3 180 aa11.48□□□□□ -0.57
CSNK1D-204ENST00000398519 CHCHD10Q8WYQ3 142 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-204ENST00000398519 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
CSNK1D-204ENST00000398519 LECT2O14960 151 aa11.47□□□□□ -0.57
CSNK1D-204ENST00000398519 RAB5BP61020 215 aa11.47□□□□□ -0.57
CSNK1D-204ENST00000398519 A0A096LNJ9 63 aa11.46□□□□□ -0.57
CSNK1D-204ENST00000398519 TMEM141Q96I45 108 aa11.46□□□□□ -0.57
CSNK1D-204ENST00000398519 TRAV13-1A0A0B4J241 112 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 GAGE12HA6NDE8 117 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 EREGO14944 169 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 CCL25O15444 150 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 NPSP0C0P6 89 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 XCL1P47992 114 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 SS18Q15532 418 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 CHCHD1Q96BP2 118 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-204ENST00000398519 ERASQ7Z444 233 aa11.44□□□□□ -0.58
CSNK1D-204ENST00000398519 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
CSNK1D-204ENST00000398519 SCGB3A1Q96QR1 104 aa11.44□□□□□ -0.58
CSNK1D-204ENST00000398519 LINC01549A6NIU2 74 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 C1orf196B1AJZ1 125 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 KRTAP10-2P60368 255 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 FOXI1Q12951 378 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 LINC00173Q6ZV60 143 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 SPATA12Q7Z6I5 190 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 Q8N814 137 aa11.43□□□□□ -0.58
CSNK1D-204ENST00000398519 HBDP02042 147 aa11.42□□□□□ -0.58
CSNK1D-204ENST00000398519 Q6ZN92 141 aa11.42□□□□□ -0.58
CSNK1D-204ENST00000398519 TEX43Q6ZNM6 134 aa11.42□□□□□ -0.58
CSNK1D-204ENST00000398519 AMELXQ99217 191 aa11.42□□□□□ -0.58
CSNK1D-204ENST00000398519 USP17L23D6RBM5 183 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 LINC00310P59036 64 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 VCX2Q9H322 139 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BKO60814 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BJP06899 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BOP23527 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BBP33778 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 FUSP35637 526 aaKnown RBP eCLIP11.41□□□□□ -0.584e-7■■■■□ 25
CSNK1D-204ENST00000398519 HIST1H2BDP58876 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BCP62807 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST2H2BEQ16778 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BHQ93079 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BNQ99877 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 HIST1H2BMQ99879 126 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 DNAH5Q8TE73 4624 aa11.41□□□□□ -0.58
CSNK1D-204ENST00000398519 SERF1AO75920 110 aa11.4□□□□□ -0.58
CSNK1D-204ENST00000398519 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
CSNK1D-204ENST00000398519 PAPPA-AS1Q5QFB9 102 aa11.4□□□□□ -0.58
CSNK1D-204ENST00000398519 C2orf88Q9BSF0 95 aa11.39□□□□□ -0.59
CSNK1D-204ENST00000398519 HSBP1O75506 76 aa11.38□□□□□ -0.59
CSNK1D-204ENST00000398519 UBE2D1P51668 147 aa11.38□□□□□ -0.59
CSNK1D-204ENST00000398519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-204ENST00000398519 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
CSNK1D-204ENST00000398519 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-204ENST00000398519 NUPR1O60356 82 aa11.37□□□□□ -0.59
CSNK1D-204ENST00000398519 C14orf177Q52M58 125 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms