RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 RMI2Q96E14 147 aa10.39□□□□□ -0.75
MBD1-207ENST00000398488 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
MBD1-207ENST00000398488 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
MBD1-207ENST00000398488 APOBP04114 4563 aaKnown RBP10.39□□□□□ -0.75
MBD1-207ENST00000398488 IFI27P40305 119 aaPredicted RBP10.38□□□□□ -0.75
MBD1-207ENST00000398488 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
MBD1-207ENST00000398488 RNASE13Q5GAN3 156 aaKnown RBP10.38□□□□□ -0.75
MBD1-207ENST00000398488 Q8N8P6 123 aa10.38□□□□□ -0.75
MBD1-207ENST00000398488 RYR1P21817 5038 aa10.38□□□□□ -0.75
MBD1-207ENST00000398488 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
MBD1-207ENST00000398488 Q8N814 137 aa10.38□□□□□ -0.75
MBD1-207ENST00000398488 OR5A1Q8NGJ0 315 aa10.38□□□□□ -0.75
MBD1-207ENST00000398488 OPRPNQ99935 248 aaPredicted RBP10.38□□□□□ -0.75
MBD1-207ENST00000398488 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
MBD1-207ENST00000398488 COX19Q49B96 90 aa10.37□□□□□ -0.75
MBD1-207ENST00000398488 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
MBD1-207ENST00000398488 DNAH8Q96JB1 4490 aa10.36□□□□□ -0.75
MBD1-207ENST00000398488 Q6ZUT4 128 aa10.36□□□□□ -0.75
MBD1-207ENST00000398488 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
MBD1-207ENST00000398488 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
MBD1-207ENST00000398488 TRAPPC1Q9Y5R8 145 aa10.36□□□□□ -0.75
MBD1-207ENST00000398488 HERC2O95714 4834 aa10.36□□□□□ -0.75
MBD1-207ENST00000398488 EREGO14944 169 aa10.35□□□□□ -0.75
MBD1-207ENST00000398488 MT-ND6P03923 174 aa10.35□□□□□ -0.75
MBD1-207ENST00000398488 RAB5AP20339 215 aa10.35□□□□□ -0.75
MBD1-207ENST00000398488 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
MBD1-207ENST00000398488 LINC00959A0A1B0GUT2 108 aa10.34□□□□□ -0.75
MBD1-207ENST00000398488 TIMM21Q9BVV7 248 aa10.34□□□□□ -0.75
MBD1-207ENST00000398488 SMCO4Q9NRQ5 59 aa10.34□□□□□ -0.75
MBD1-207ENST00000398488 CSDC2Q9Y534 153 aaKnown RBP10.34□□□□□ -0.75
MBD1-207ENST00000398488 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
MBD1-207ENST00000398488 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
MBD1-207ENST00000398488 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
MBD1-207ENST00000398488 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
MBD1-207ENST00000398488 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.76
MBD1-207ENST00000398488 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
MBD1-207ENST00000398488 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
MBD1-207ENST00000398488 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
MBD1-207ENST00000398488 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
MBD1-207ENST00000398488 SCO1O75880 301 aa10.32□□□□□ -0.76
MBD1-207ENST00000398488 TMEM18Q96B42 140 aa10.32□□□□□ -0.76
MBD1-207ENST00000398488 URB1-AS1Q96HZ7 61 aa10.32□□□□□ -0.76
MBD1-207ENST00000398488 HSPG2P98160 4391 aa10.32□□□□□ -0.76
MBD1-207ENST00000398488 FOXI1Q12951 378 aa10.31□□□□□ -0.76
MBD1-207ENST00000398488 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
MBD1-207ENST00000398488 CCL25O15444 150 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 PRSS1P07477 247 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 XCL1P47992 114 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
MBD1-207ENST00000398488 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
MBD1-207ENST00000398488 IGLV5-52A0A0A0MRZ9 124 aa10.29□□□□□ -0.76
MBD1-207ENST00000398488 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
MBD1-207ENST00000398488 ORMDL2Q53FV1 153 aa10.29□□□□□ -0.76
MBD1-207ENST00000398488 C18orf32Q8TCD1 76 aa10.29□□□□□ -0.76
MBD1-207ENST00000398488 TRAV13-1A0A0B4J241 112 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 COLCA2A8K830 154 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
MBD1-207ENST00000398488 CDPF1Q6NVV7 123 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 C15orf56Q8N910 161 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 PYGO1Q9Y3Y4 419 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
MBD1-207ENST00000398488 K7EMI3 77 aa10.27□□□□□ -0.77
MBD1-207ENST00000398488 SLPIP03973 132 aa10.27□□□□□ -0.77
MBD1-207ENST00000398488 GCSHP23434 173 aa10.27□□□□□ -0.77
MBD1-207ENST00000398488 SMAGPQ0VAQ4 97 aa10.27□□□□□ -0.77
MBD1-207ENST00000398488 SS18Q15532 418 aa10.27□□□□□ -0.77
MBD1-207ENST00000398488 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
MBD1-207ENST00000398488 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
MBD1-207ENST00000398488 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
MBD1-207ENST00000398488 A0A096LNJ9 63 aa10.24□□□□□ -0.77
MBD1-207ENST00000398488 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
MBD1-207ENST00000398488 TRGC2P03986 189 aa10.24□□□□□ -0.77
MBD1-207ENST00000398488 HIGD2BQ4VC39 106 aa10.24□□□□□ -0.77
MBD1-207ENST00000398488 FA2HQ7L5A8 372 aa10.24□□□□□ -0.77
MBD1-207ENST00000398488 FAM30AQ9NZY2 134 aa10.24□□□□□ -0.77
MBD1-207ENST00000398488 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 hDV102S1A0JD36 115 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 COX6A2Q02221 97 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 PMCHL1Q16048 86 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 C5orf38Q86SI9 138 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 LINC00526Q96FQ7 95 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 AMELXQ99217 191 aa10.23□□□□□ -0.77
MBD1-207ENST00000398488 LINC00614P0C842 121 aa10.22□□□□□ -0.77
MBD1-207ENST00000398488 XGP55808 180 aa10.22□□□□□ -0.77
MBD1-207ENST00000398488 HAMPP81172 84 aa10.22□□□□□ -0.77
MBD1-207ENST00000398488 LINC00242Q5T6M2 205 aa10.21□□□□□ -0.78
MBD1-207ENST00000398488 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
MBD1-207ENST00000398488 UBE2D1P51668 147 aa10.2□□□□□ -0.78
MBD1-207ENST00000398488 SCGB3A1Q96QR1 104 aa10.2□□□□□ -0.78
MBD1-207ENST00000398488 TIMM17AQ99595 171 aa10.2□□□□□ -0.78
MBD1-207ENST00000398488 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
MBD1-207ENST00000398488 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
MBD1-207ENST00000398488 CDK2AP2O75956 126 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms