RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 IGHV1-24A0A0C4DH33 117 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 DEFB130BP0DP73 79 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 DEFB130AP0DP74 79 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 FXYD7P58549 80 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 NOTCH2NLQ7Z3S9 236 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 NIT2Q9NQR4 276 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 NAT8BQ9UHF3 227 aa2.55□□□□□ -2
UBE3A-202ENST00000397954 NBEAL1Q6ZS30 2694 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 TRBV25-1A0A075B6N4 114 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 TMEM238C9JI98 176 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 IGLV2-8P01709 118 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 ARMS2P0C7Q2 107 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 Q5BKY6 102 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 SPANXN1Q5VSR9 72 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 GNG13Q9P2W3 67 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 KIF25-AS1Q9Y6Z4 181 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 TGIF2-C20orf24A0A0A6YYL0 155 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 CRYGDP07320 174 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 TWIST1Q15672 202 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 TMEM241Q24JQ0 296 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 SFTA2Q6UW10 78 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 Q8TAT8 98 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 HIST1H4GQ99525 98 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 JPT2Q9H910 190 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 PRR34Q9NV39 138 aa2.54□□□□□ -2
UBE3A-202ENST00000397954 TRBV6-8A0A0A6YYG3 113 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 A0A1B0GUT8 65 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 SMIM27A0A1W2PRY6 76 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 MT-ND6P03923 174 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 SRP19P09132 144 aaKnown RBP2.53□□□□□ -2
UBE3A-202ENST00000397954 CRIP1P50238 77 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 ZNF80P51504 273 aaPredicted RBP2.53□□□□□ -2
UBE3A-202ENST00000397954 GNG5P63218 68 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 CXCL6P80162 114 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 KIAA0087Q14695 138 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 ESRGQ1W209 222 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
UBE3A-202ENST00000397954 NIT1Q86X76 327 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 SLC25A29Q8N8R3 303 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 MRPL16Q9NX20 251 aaKnown RBP2.53□□□□□ -2
UBE3A-202ENST00000397954 MDFICQ9P1T7 246 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 LOC105371267A0A1B0GV96 52 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 MRPS36P82909 103 aaKnown RBP2.53□□□□□ -2
UBE3A-202ENST00000397954 FAM19A3Q7Z5A8 133 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 CHCHD5Q9BSY4 110 aa2.53□□□□□ -2
UBE3A-202ENST00000397954 TRBV24-1A0A075B6N3 115 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 TRBV27A0A0K0K1C4 114 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 H3BVH4 76 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 SNAPINO95295 136 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 PFN2P35080 140 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 CNBPP62633 177 aaKnown RBP2.52□□□□□ -2.01
UBE3A-202ENST00000397954 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 LINC01551Q86U37 167 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 OR2D3Q8NGH3 330 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 SMIM7Q9BQ49 75 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 LINC00474Q9P2X8 69 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 NOTCH3Q9UM47 2321 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 RYR2Q92736 4967 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 LINC01546A6NGU7 62 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 I3L3M4 83 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 M0QY20 66 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 RTL8CO15255 209 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 MT-ND4LP03901 98 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 SEC11AP67812 179 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 RHEBQ15382 184 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 TMEM243Q9BU79 118 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 SPANXA1Q9NS26 97 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
UBE3A-202ENST00000397954 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 ZNF727A8MUV8 499 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 M0R036 132 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 GNRH2O43555 120 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 CRPP02741 224 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 AKR1D1P51857 326 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 AMN1Q8IY45 258 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 SEC11CQ9BY50 192 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 MAP1LC3AQ9H492 121 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 MUC4Q99102 2169 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 FRAS1Q86XX4 4008 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 APCSP02743 223 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 LINC00315P59091 139 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 ZNF56Q15929 161 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 C10orf91Q5T1B1 145 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 NKAPP1Q8N9T2 125 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 TMEM101Q96IK0 257 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 EIF5A2Q9GZV4 153 aaKnown RBP2.51□□□□□ -2.01
UBE3A-202ENST00000397954 DNAH2Q9P225 4427 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 A6NDN8 102 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 SLPIP03973 132 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 HTN3P15516 51 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 HBBP68871 147 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 PRR3P79522 188 aaKnown RBP2.51□□□□□ -2.01
UBE3A-202ENST00000397954 GTSF1Q8WW33 167 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 ST20Q9HBF5 79 aa2.51□□□□□ -2.01
UBE3A-202ENST00000397954 A0A087WTM6 91 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 A0A087WX48 190 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 A0A1B0GXF2 115 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 UBE2L6O14933 153 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms