RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 C3orf79P0CE67 100 aa9.16□□□□□ -0.94
SEC13-209ENST00000397117 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
SEC13-209ENST00000397117 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
SEC13-209ENST00000397117 IGLL5B9A064 214 aa9.16□□□□□ -0.94
SEC13-209ENST00000397117 LINC00173Q6ZV60 143 aa9.16□□□□□ -0.94
SEC13-209ENST00000397117 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
SEC13-209ENST00000397117 SCGB3A1Q96QR1 104 aa9.16□□□□□ -0.94
SEC13-209ENST00000397117 CHCHD7Q9BUK0 85 aa9.16□□□□□ -0.94
SEC13-209ENST00000397117 TRBV6-8A0A0A6YYG3 113 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 UBE2L6O14933 153 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 ATP5LO75964 103 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 KRTDAPP60985 99 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
SEC13-209ENST00000397117 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 TMEM243Q9BU79 118 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
SEC13-209ENST00000397117 DNAH11Q96DT5 4516 aa9.14□□□□□ -0.95
SEC13-209ENST00000397117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.14□□□□□ -0.95
SEC13-209ENST00000397117 IGKV2-29A2NJV5 120 aaPredicted RBP9.14□□□□□ -0.95
SEC13-209ENST00000397117 PKD1P98161 4303 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
SEC13-209ENST00000397117 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 ERASQ7Z444 233 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 C15orf53Q8NAA6 179 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 IFI27L1Q96BM0 104 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 CHCHD5Q9BSY4 110 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 VAMP8Q9BV40 100 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 Q6ZN92 141 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 MIEN1Q9BRT3 115 aa9.13□□□□□ -0.95
SEC13-209ENST00000397117 H0Y8G0 127 aa9.12□□□□□ -0.95
SEC13-209ENST00000397117 SYS1-DBNDD2H3BUS1 97 aa9.12□□□□□ -0.95
SEC13-209ENST00000397117 H7C423 109 aa9.12□□□□□ -0.95
SEC13-209ENST00000397117 ABCA13Q86UQ4 5058 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 PRSS1P07477 247 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 AMMECR1LQ6DCA0 310 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 SPATA12Q7Z6I5 190 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 TIMM17AQ99595 171 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 SPANXA1Q9NS26 97 aa9.11□□□□□ -0.95
SEC13-209ENST00000397117 IGIPA6NJ69 53 aa9.1□□□□□ -0.95
SEC13-209ENST00000397117 GAGE6Q13070 117 aa9.1□□□□□ -0.95
SEC13-209ENST00000397117 LELP1Q5T871 98 aa9.1□□□□□ -0.95
SEC13-209ENST00000397117 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
SEC13-209ENST00000397117 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
SEC13-209ENST00000397117 PYGO1Q9Y3Y4 419 aa9.1□□□□□ -0.95
SEC13-209ENST00000397117 C20orf202A1L168 122 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 TMEM262E9PQX1 116 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 EREGO14944 169 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 RTL8CO15255 209 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 FGF6P10767 208 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 TIRAPP58753 221 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 PRSS29PA6NIE9 313 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 LINC00469Q8N7U9 141 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 PAM16Q9Y3D7 125 aa9.09□□□□□ -0.95
SEC13-209ENST00000397117 TRAV8-6A0A0B4J262 113 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 M0R143 59 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 NPSP0C0P6 89 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 LINC01545Q5VT33 79 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 BAALCQ8WXS3 180 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 KRTAP4-5Q9BYR2 181 aa9.08□□□□□ -0.96
SEC13-209ENST00000397117 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
SEC13-209ENST00000397117 A0A1B0GV90 55 aa9.07□□□□□ -0.96
SEC13-209ENST00000397117 ZNF25P17030 456 aaPredicted RBP9.07□□□□□ -0.96
SEC13-209ENST00000397117 ESRGQ1W209 222 aa9.07□□□□□ -0.96
SEC13-209ENST00000397117 OPRPNQ99935 248 aaPredicted RBP9.07□□□□□ -0.96
SEC13-209ENST00000397117 VCX2Q9H322 139 aa9.07□□□□□ -0.96
SEC13-209ENST00000397117 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
SEC13-209ENST00000397117 A0A087WX48 190 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 TRAV12-1A0A0B4J245 112 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 CCL18P55774 89 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
SEC13-209ENST00000397117 PMVKQ15126 192 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 Q6ZUT4 128 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 UQCR10Q9UDW1 63 aa9.05□□□□□ -0.96
SEC13-209ENST00000397117 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
SEC13-209ENST00000397117 M0R2N4 97 aa9.04□□□□□ -0.96
SEC13-209ENST00000397117 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
SEC13-209ENST00000397117 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
SEC13-209ENST00000397117 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
SEC13-209ENST00000397117 RBX1P62877 108 aa9.03□□□□□ -0.96
SEC13-209ENST00000397117 ODF1Q14990 250 aa9.03□□□□□ -0.96
SEC13-209ENST00000397117 MPV17L2Q567V2 206 aa9.03□□□□□ -0.96
SEC13-209ENST00000397117 ZC2HC1BQ5TFG8 222 aa9.03□□□□□ -0.96
SEC13-209ENST00000397117 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
SEC13-209ENST00000397117 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
SEC13-209ENST00000397117 FAM104AQ969W3 186 aa9.02□□□□□ -0.96
SEC13-209ENST00000397117 AMELXQ99217 191 aa9.02□□□□□ -0.96
SEC13-209ENST00000397117 HSPG2P98160 4391 aa9.02□□□□□ -0.97
SEC13-209ENST00000397117 IGLV4-60A0A075B6I1 120 aa9.02□□□□□ -0.97
SEC13-209ENST00000397117 ATOH7Q8N100 152 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms