RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 DEFB136Q30KP8 78 aa17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 AKAP9Q99996 3911 aa17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 TINCRA0A1B0GVN0 87 aa17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 IGKV2-29A2NJV5 120 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 PSMB8P28062 276 aa17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 IMUPQ9GZP8 106 aa17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 PPDPFQ9H3Y8 114 aa17.49■□□□□ 0.39
CSNK1E-203ENST00000396832 ACYP1P07311 99 aa17.48■□□□□ 0.39
CSNK1E-203ENST00000396832 CITED2Q99967 270 aaPredicted RBP17.48■□□□□ 0.39
CSNK1E-203ENST00000396832 PRORYQ9H606 182 aa17.48■□□□□ 0.39
CSNK1E-203ENST00000396832 K7EQG2 157 aa17.47■□□□□ 0.39
CSNK1E-203ENST00000396832 K7EMT4 169 aa17.47■□□□□ 0.39
CSNK1E-203ENST00000396832 DEFB112Q30KQ8 113 aa17.47■□□□□ 0.39
CSNK1E-203ENST00000396832 SMCR5Q8TEV8 140 aa17.46■□□□□ 0.39
CSNK1E-203ENST00000396832 A0A0U1RRA0 63 aa17.45■□□□□ 0.38
CSNK1E-203ENST00000396832 Q6ZSN1 163 aa17.45■□□□□ 0.38
CSNK1E-203ENST00000396832 TIMM17BO60830 172 aa17.45■□□□□ 0.38
CSNK1E-203ENST00000396832 CHD6Q8TD26 2715 aa17.45■□□□□ 0.38
CSNK1E-203ENST00000396832 C9orf153Q5TBE3 101 aa17.43■□□□□ 0.38
CSNK1E-203ENST00000396832 C18orf65Q6ZTR6 163 aa17.43■□□□□ 0.38
CSNK1E-203ENST00000396832 ABCA12Q86UK0 2595 aa17.43■□□□□ 0.38
CSNK1E-203ENST00000396832 SONP18583 2426 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-203ENST00000396832 PTPN13Q12923 2485 aa17.42■□□□□ 0.38
CSNK1E-203ENST00000396832 C3orf22Q8N5N4 141 aa17.42■□□□□ 0.38
CSNK1E-203ENST00000396832 JMJD1CQ15652 2540 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 PRB1P04280 392 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 LINC00694P0DN24 101 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 HOXD3P31249 432 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 DEFB131AP59861 70 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 LINC00643Q86TS7 51 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 UBE2D4Q9Y2X8 147 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 DOPEY1Q5JWR5 2465 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 NIPBLQ6KC79 2804 aaeCLIP17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 TEX15Q9BXT5 2789 aa17.41■□□□□ 0.38
CSNK1E-203ENST00000396832 ZNF625Q96I27 306 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-203ENST00000396832 CDKN2A-AS1Q9UH64 79 aa17.4■□□□□ 0.38
CSNK1E-203ENST00000396832 COX7A2LO14548 114 aa17.4■□□□□ 0.38
CSNK1E-203ENST00000396832 CHCHD7Q9BUK0 85 aa17.4■□□□□ 0.38
CSNK1E-203ENST00000396832 CIRBPQ14011 172 aaKnown RBP17.39■□□□□ 0.37
CSNK1E-203ENST00000396832 LINC00308Q8TCZ7 52 aa17.39■□□□□ 0.37
CSNK1E-203ENST00000396832 NDUFA7O95182 113 aa17.39■□□□□ 0.37
CSNK1E-203ENST00000396832 SLURP1P55000 103 aa17.39■□□□□ 0.37
CSNK1E-203ENST00000396832 NDUFA1O15239 70 aa17.38■□□□□ 0.37
CSNK1E-203ENST00000396832 DAZ2Q13117 558 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-203ENST00000396832 DAZ4Q86SG3 579 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-203ENST00000396832 DAZ3Q9NR90 486 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-203ENST00000396832 LINC00467Q9BRT7 94 aa17.37■□□□□ 0.37
CSNK1E-203ENST00000396832 NF1P21359 2839 aa17.37■□□□□ 0.37
CSNK1E-203ENST00000396832 EDA2RQ9HAV5 297 aa17.37■□□□□ 0.37
CSNK1E-203ENST00000396832 UQCRQO14949 82 aa17.36■□□□□ 0.37
CSNK1E-203ENST00000396832 Q8N2B8 174 aa17.36■□□□□ 0.37
CSNK1E-203ENST00000396832 RBMY1BA6NDE4 496 aaKnown RBP17.35■□□□□ 0.37
CSNK1E-203ENST00000396832 RBMY1EA6NEQ0 496 aaKnown RBP17.35■□□□□ 0.37
CSNK1E-203ENST00000396832 RBMY1DP0C7P1 496 aaKnown RBP17.35■□□□□ 0.37
CSNK1E-203ENST00000396832 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.35■□□□□ 0.37
CSNK1E-203ENST00000396832 BAALC-AS2P0C853 105 aa17.34■□□□□ 0.37
CSNK1E-203ENST00000396832 KHDC1LQ5JSQ8 128 aa17.34■□□□□ 0.37
CSNK1E-203ENST00000396832 Q9H8V8 135 aa17.34■□□□□ 0.37
CSNK1E-203ENST00000396832 DNAJC30Q96LL9 226 aa17.34■□□□□ 0.37
CSNK1E-203ENST00000396832 LINC00526Q96FQ7 95 aa17.33■□□□□ 0.36
CSNK1E-203ENST00000396832 IGHV3OR16-12A0A075B7B8 117 aa17.33■□□□□ 0.36
CSNK1E-203ENST00000396832 HERVK_113P63121 156 aa17.33■□□□□ 0.36
CSNK1E-203ENST00000396832 B4DSR2 109 aa17.32■□□□□ 0.36
CSNK1E-203ENST00000396832 SDIM1Q6ZPB5 146 aa17.32■□□□□ 0.36
CSNK1E-203ENST00000396832 LOC107984640A0A0U1RRK4 108 aa17.31■□□□□ 0.36
CSNK1E-203ENST00000396832 COX6A2Q02221 97 aa17.31■□□□□ 0.36
CSNK1E-203ENST00000396832 BEAN1Q3B7T3 259 aa17.31■□□□□ 0.36
CSNK1E-203ENST00000396832 KLK5Q9Y337 293 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-203ENST00000396832 ZNF469Q96JG9 3925 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-203ENST00000396832 SOSTDC1Q6X4U4 206 aa17.3■□□□□ 0.36
CSNK1E-203ENST00000396832 TIRAPP58753 221 aa17.3■□□□□ 0.36
CSNK1E-203ENST00000396832 PEMTQ9UBM1 199 aa17.3■□□□□ 0.36
CSNK1E-203ENST00000396832 NAV2Q8IVL1 2488 aa17.3■□□□□ 0.36
CSNK1E-203ENST00000396832 ATP5G1P05496 136 aa17.29■□□□□ 0.36
CSNK1E-203ENST00000396832 C5orf38Q86SI9 138 aa17.29■□□□□ 0.36
CSNK1E-203ENST00000396832 TRACP01848 142 aa17.29■□□□□ 0.36
CSNK1E-203ENST00000396832 C22orf24Q9Y442 160 aa17.29■□□□□ 0.36
CSNK1E-203ENST00000396832 IGLV5-45A0A087WSX0 123 aa17.28■□□□□ 0.36
CSNK1E-203ENST00000396832 CXCL5P42830 114 aa17.27■□□□□ 0.36
CSNK1E-203ENST00000396832 FAM218AQ96MZ4 157 aa17.27■□□□□ 0.36
CSNK1E-203ENST00000396832 GAGE2AQ6NT46 116 aa17.27■□□□□ 0.35
CSNK1E-203ENST00000396832 DGAT2L7PQ6IED9 249 aa17.26■□□□□ 0.35
CSNK1E-203ENST00000396832 COX7CP15954 63 aa17.25■□□□□ 0.35
CSNK1E-203ENST00000396832 IGHV3-53P01767 116 aa17.25■□□□□ 0.35
CSNK1E-203ENST00000396832 CSDC2Q9Y534 153 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-203ENST00000396832 IGLV5-39A0A0G2JS06 123 aa17.24■□□□□ 0.35
CSNK1E-203ENST00000396832 COPS9Q8WXC6 57 aa17.23■□□□□ 0.35
CSNK1E-203ENST00000396832 CCDC168Q8NDH2 2452 aa17.23■□□□□ 0.35
CSNK1E-203ENST00000396832 RNF152Q8N8N0 203 aa17.23■□□□□ 0.35
CSNK1E-203ENST00000396832 XCL2Q9UBD3 114 aa17.23■□□□□ 0.35
CSNK1E-203ENST00000396832 NBPF19A0A087WUL8 3843 aa17.23■□□□□ 0.35
CSNK1E-203ENST00000396832 TRAV13-1A0A0B4J241 112 aa17.22■□□□□ 0.35
CSNK1E-203ENST00000396832 ZNF415Q09FC8 603 aa17.22■□□□□ 0.35
CSNK1E-203ENST00000396832 C2orf48Q96LS8 159 aa17.22■□□□□ 0.35
CSNK1E-203ENST00000396832 Q9HAA7 133 aa17.22■□□□□ 0.35
CSNK1E-203ENST00000396832 INAFM2P0DMQ5 153 aa17.22■□□□□ 0.35
CSNK1E-203ENST00000396832 LINC00242Q5T6M2 205 aa17.22■□□□□ 0.35
CSNK1E-203ENST00000396832 UBE2E2Q96LR5 201 aa17.21■□□□□ 0.35
CSNK1E-203ENST00000396832 PRIMA1Q86XR5 153 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms