RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 COTL1Q14019 142 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 TMEM97Q5BJF2 176 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 NEGR1Q7Z3B1 354 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 ATP6V0E2Q8NHE4 81 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 NUPR1O60356 82 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 TSHBP01222 138 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 DNAH10OSP0CZ25 163 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 LINC00694P0DN24 101 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 LINC00310P59036 64 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 TMEM18Q96B42 140 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 GTSF1LQ9H1H1 148 aa7□□□□□ -1.29
NEDD8-202ENST00000396828 IGHV1-24A0A0C4DH33 117 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 HBDP02042 147 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 AMTP48728 403 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 KRTAP10-1P60331 282 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 PDZD11Q5EBL8 140 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 LYPD5Q6UWN5 251 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 HIST3H2BBQ8N257 126 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 FAM19A2Q8N3H0 131 aa6.99□□□□□ -1.29
NEDD8-202ENST00000396828 PMCHL1Q16048 86 aa6.98□□□□□ -1.29
NEDD8-202ENST00000396828 DEFB104AQ8WTQ1 72 aa6.98□□□□□ -1.29
NEDD8-202ENST00000396828 PACRGQ96M98 296 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-202ENST00000396828 DMBT1Q9UGM3 2413 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-202ENST00000396828 TRBV25-1A0A075B6N4 114 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 A0A087WTM6 91 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 EPM2AB3EWF7 344 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 SMAGPQ0VAQ4 97 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 WFDC10BQ8IUB3 73 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 CYSLTR1Q9Y271 337 aa6.97□□□□□ -1.29
NEDD8-202ENST00000396828 TRBV6-8A0A0A6YYG3 113 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 UBE2L6O14933 153 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 LEPROTL1O95214 131 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 FABP4P15090 132 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 C20orf203Q8NBC4 194 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 TOMM6Q96B49 74 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 TMEM243Q9BU79 118 aa6.96□□□□□ -1.3
NEDD8-202ENST00000396828 H7C423 109 aa6.95□□□□□ -1.3
NEDD8-202ENST00000396828 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-202ENST00000396828 HAMPP81172 84 aa6.95□□□□□ -1.3
NEDD8-202ENST00000396828 NTM-AS1Q6ZSK4 140 aa6.95□□□□□ -1.3
NEDD8-202ENST00000396828 HIST1H2BLQ99880 126 aa6.95□□□□□ -1.3
NEDD8-202ENST00000396828 CHCHD7Q9BUK0 85 aa6.95□□□□□ -1.3
NEDD8-202ENST00000396828 FLG2Q5D862 2391 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-202ENST00000396828 A0A096LNJ9 63 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-202ENST00000396828 ATP5LO75964 103 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 TIRAPP58753 221 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 LELP1Q5T871 98 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 Q5VSD8 79 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 SCGB3A1Q96QR1 104 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 CHCHD5Q9BSY4 110 aa6.94□□□□□ -1.3
NEDD8-202ENST00000396828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-202ENST00000396828 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-202ENST00000396828 PKIAP61925 76 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
NEDD8-202ENST00000396828 AMMECR1LQ6DCA0 310 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 DGAT2L7PQ6IED9 249 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 ERASQ7Z444 233 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 TMEM101Q96IK0 257 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 MAP1LC3CQ9BXW4 147 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
NEDD8-202ENST00000396828 IFITM10A6NMD0 228 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 NPSP0C0P6 89 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 ZNF25P17030 456 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-202ENST00000396828 PAPPA-AS1Q5QFB9 102 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 Q6ZN92 141 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 TIMM17AQ99595 171 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
NEDD8-202ENST00000396828 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 TMEM262E9PQX1 116 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 EREGO14944 169 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 PRSS1P07477 247 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 FGF6P10767 208 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 KRTDAPP60985 99 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 GAGE6Q13070 117 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 MRPL52Q86TS9 123 aaKnown RBP6.91□□□□□ -1.3
NEDD8-202ENST00000396828 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 OR10D4PQ8NGN7 298 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
NEDD8-202ENST00000396828 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
NEDD8-202ENST00000396828 GCSHP23434 173 aa6.9□□□□□ -1.3
NEDD8-202ENST00000396828 AKR1D1P51857 326 aa6.9□□□□□ -1.3
NEDD8-202ENST00000396828 OR5A1Q8NGJ0 315 aa6.9□□□□□ -1.3
NEDD8-202ENST00000396828 TRAV9-2A0A087WT02 112 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 A0A087WX48 190 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 LOC105371267A0A1B0GV96 52 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 H0Y8G0 127 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
NEDD8-202ENST00000396828 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms