RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 Q6JHZ5 121 aa-0.63□□□□□ -2.51
CMC1-202ENST00000396610 MYO7BQ6PIF6 2116 aa-0.63□□□□□ -2.51
CMC1-202ENST00000396610 LSM10Q969L4 123 aaKnown RBP-0.63□□□□□ -2.51
CMC1-202ENST00000396610 AMELXQ99217 191 aa-0.63□□□□□ -2.51
CMC1-202ENST00000396610 FLNBO75369 2602 aaKnown RBP-0.63□□□□□ -2.51
CMC1-202ENST00000396610 URB1O60287 2271 aaKnown RBP-0.63□□□□□ -2.51
CMC1-202ENST00000396610 COL6A3P12111 3177 aa-0.63□□□□□ -2.51
CMC1-202ENST00000396610 LRP6O75581 1613 aa-0.64□□□□□ -2.51
CMC1-202ENST00000396610 PIGYQ3MUY2 71 aa-0.64□□□□□ -2.51
CMC1-202ENST00000396610 BAGE2Q86Y30 109 aa-0.64□□□□□ -2.51
CMC1-202ENST00000396610 RERGLQ9H628 205 aa-0.64□□□□□ -2.51
CMC1-202ENST00000396610 SERP1Q9Y6X1 66 aa-0.64□□□□□ -2.51
CMC1-202ENST00000396610 PPIP5K1Q6PFW1 1433 aa-0.64□□□□□ -2.51
CMC1-202ENST00000396610 WNK3Q9BYP7 1800 aa-0.65□□□□□ -2.51
CMC1-202ENST00000396610 F8VRH5 84 aa-0.65□□□□□ -2.51
CMC1-202ENST00000396610 SELENOWP63302 87 aa-0.65□□□□□ -2.51
CMC1-202ENST00000396610 SNRNP25Q9BV90 132 aaKnown RBP-0.65□□□□□ -2.51
CMC1-202ENST00000396610 LINC00472Q9H8W2 130 aa-0.65□□□□□ -2.51
CMC1-202ENST00000396610 GRIN2AQ12879 1464 aa-0.66□□□□□ -2.51
CMC1-202ENST00000396610 FAT1Q14517 4588 aa-0.66□□□□□ -2.51
CMC1-202ENST00000396610 UQCR11O14957 56 aa-0.66□□□□□ -2.52
CMC1-202ENST00000396610 Q6AWC8 147 aa-0.66□□□□□ -2.52
CMC1-202ENST00000396610 LRP1BQ9NZR2 4599 aa-0.66□□□□□ -2.52
CMC1-202ENST00000396610 PLXNB2O15031 1838 aa-0.66□□□□□ -2.52
CMC1-202ENST00000396610 LAMC1P11047 1609 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 EP300Q09472 2414 aaPredicted RBP-0.67□□□□□ -2.52
CMC1-202ENST00000396610 KDM3BQ7LBC6 1761 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 FAM25AB3EWG3 89 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 FAM25CB3EWG5 89 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 FAM25GB3EWG6 89 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 K7EQZ3 153 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 MEIG1Q5JSS6 88 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 ARL11Q969Q4 196 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 NDUFA4L2Q9NRX3 87 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 MYOM3Q5VTT5 1437 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 CFTRP13569 1480 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
CMC1-202ENST00000396610 TNFP01375 233 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 APOC3P02656 99 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 TPPP2P59282 170 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 PPP3R2Q96LZ3 170 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 MGST2Q99735 147 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 NAA60Q9H7X0 242 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 DYNLRB1Q9NP97 96 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 NWD2Q9ULI1 1742 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 CNOT1A5YKK6 2376 aaKnown RBP-0.68□□□□□ -2.52
CMC1-202ENST00000396610 KMT2CQ8NEZ4 4911 aaKnown RBP-0.68□□□□□ -2.52
CMC1-202ENST00000396610 TGP01266 2768 aa-0.68□□□□□ -2.52
CMC1-202ENST00000396610 TRBV7-3A0A075B6L6 115 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 IGLC7A0M8Q6 106 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 GNG7O60262 68 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 LINC00470Q9BZP3 86 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 LINC01558Q9Y6Z2 57 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 LRRC37A2A6NM11 1700 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 PRDM2Q13029 1718 aa-0.69□□□□□ -2.52
CMC1-202ENST00000396610 KRTAP19-8Q3LI54 63 aa-0.7□□□□□ -2.52
CMC1-202ENST00000396610 TSLPQ969D9 159 aa-0.7□□□□□ -2.52
CMC1-202ENST00000396610 ARAP2Q8WZ64 1704 aa-0.71□□□□□ -2.52
CMC1-202ENST00000396610 COX6B1P14854 86 aa-0.71□□□□□ -2.52
CMC1-202ENST00000396610 SPRR1BP22528 89 aa-0.71□□□□□ -2.52
CMC1-202ENST00000396610 KRTAP20-2Q3LI61 65 aa-0.71□□□□□ -2.52
CMC1-202ENST00000396610 CCDC58Q4VC31 144 aa-0.71□□□□□ -2.52
CMC1-202ENST00000396610 Q56UQ5 140 aa-0.71□□□□□ -2.52
CMC1-202ENST00000396610 HMGN4O00479 90 aa-0.72□□□□□ -2.52
CMC1-202ENST00000396610 SPANXDQ9BXN6 97 aa-0.72□□□□□ -2.52
CMC1-202ENST00000396610 MYH8P13535 1937 aa-0.72□□□□□ -2.53
CMC1-202ENST00000396610 ZNF236Q9UL36 1845 aa-0.73□□□□□ -2.53
CMC1-202ENST00000396610 HERC2O95714 4834 aa-0.73□□□□□ -2.53
CMC1-202ENST00000396610 LOC285095A0A1B0GVY8 99 aa-0.73□□□□□ -2.53
CMC1-202ENST00000396610 MIF4GDA9UHW6 222 aaKnown RBP-0.73□□□□□ -2.53
CMC1-202ENST00000396610 SPEF2Q9C093 1822 aa-0.73□□□□□ -2.53
CMC1-202ENST00000396610 MXRA5Q9NR99 2828 aa-0.74□□□□□ -2.53
CMC1-202ENST00000396610 LOC730098B7Z3J9 87 aa-0.74□□□□□ -2.53
CMC1-202ENST00000396610 NDUFA2O43678 99 aa-0.74□□□□□ -2.53
CMC1-202ENST00000396610 BTG2P78543 158 aa-0.74□□□□□ -2.53
CMC1-202ENST00000396610 LAMA5O15230 3695 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 SFT2D2O95562 160 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 APOC2P02655 101 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 CATR1Q13166 79 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 MRPL54Q6P161 138 aaKnown RBP-0.75□□□□□ -2.53
CMC1-202ENST00000396610 C8orf59Q8N0T1 100 aaPredicted RBP-0.75□□□□□ -2.53
CMC1-202ENST00000396610 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.75□□□□□ -2.53
CMC1-202ENST00000396610 SHANK2Q9UPX8 1470 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 WDR7Q9Y4E6 1490 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 DOCK1Q14185 1865 aa-0.75□□□□□ -2.53
CMC1-202ENST00000396610 IFNGP01579 166 aa-0.76□□□□□ -2.53
CMC1-202ENST00000396610 SPRR2BP35325 72 aa-0.76□□□□□ -2.53
CMC1-202ENST00000396610 DOPEY1Q5JWR5 2465 aa-0.76□□□□□ -2.53
CMC1-202ENST00000396610 EPG5Q9HCE0 2579 aa-0.76□□□□□ -2.53
CMC1-202ENST00000396610 SSSCA1O60232 199 aa-0.77□□□□□ -2.53
CMC1-202ENST00000396610 C5orf38Q86SI9 138 aa-0.77□□□□□ -2.53
CMC1-202ENST00000396610 DEFB123Q8N688 67 aa-0.77□□□□□ -2.53
CMC1-202ENST00000396610 SETD2Q9BYW2 2564 aaPredicted RBP-0.77□□□□□ -2.53
CMC1-202ENST00000396610 PCLOQ9Y6V0 5065 aa-0.77□□□□□ -2.53
CMC1-202ENST00000396610 PATJQ8NI35 1801 aa-0.78□□□□□ -2.53
CMC1-202ENST00000396610 PAPPAQ13219 1627 aa-0.78□□□□□ -2.53
CMC1-202ENST00000396610 CPSF1Q10570 1443 aaKnown RBP-0.78□□□□□ -2.53
CMC1-202ENST00000396610 DNAJC13O75165 2243 aa-0.78□□□□□ -2.53
CMC1-202ENST00000396610 COMMD6Q7Z4G1 85 aa-0.78□□□□□ -2.53
CMC1-202ENST00000396610 SVEP1Q4LDE5 3571 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms