RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 C9orf153Q5TBE3 101 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 ABCA2Q9BZC7 2435 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 MRPS36P82909 103 aaKnown RBP7.18□□□□□ -1.26
TRIM39-203ENST00000396547 C19orf54Q5BKX5 351 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 IGHG2P01859 326 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 CIRBPQ14011 172 aaKnown RBP7.18□□□□□ -1.26
TRIM39-203ENST00000396547 MRPL23Q16540 153 aaKnown RBP7.18□□□□□ -1.26
TRIM39-203ENST00000396547 KLK9Q2XQG4 91 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 Q8N2B8 174 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 Q9HAA7 133 aa7.18□□□□□ -1.26
TRIM39-203ENST00000396547 SETD2Q9BYW2 2564 aaPredicted RBP7.18□□□□□ -1.26
TRIM39-203ENST00000396547 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 KRTAP1-3Q8IUG1 177 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 IGKV3OR2-268A0A0C4DH90 116 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 MYO9AB2RTY4 2548 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
TRIM39-203ENST00000396547 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 COX6A2Q02221 97 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
TRIM39-203ENST00000396547 CITED2Q99967 270 aaPredicted RBP7.17□□□□□ -1.26
TRIM39-203ENST00000396547 UNC79Q9P2D8 2635 aa7.17□□□□□ -1.26
TRIM39-203ENST00000396547 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 DAZ2Q13117 558 aaKnown RBP7.16□□□□□ -1.26
TRIM39-203ENST00000396547 HIST2H2BCQ6DN03 193 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 DAZ4Q86SG3 579 aaKnown RBP7.16□□□□□ -1.26
TRIM39-203ENST00000396547 SPANXDQ9BXN6 97 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 DAZ3Q9NR90 486 aaKnown RBP7.16□□□□□ -1.26
TRIM39-203ENST00000396547 SPANXCQ9NY87 97 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 DEFB131AP59861 70 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 KRTAP10-9P60411 292 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.16□□□□□ -1.26
TRIM39-203ENST00000396547 LINC00694P0DN24 101 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 DEFB113Q30KQ7 82 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 SMCR5Q8TEV8 140 aa7.16□□□□□ -1.26
TRIM39-203ENST00000396547 IGHV3-53P01767 116 aa7.15□□□□□ -1.26
TRIM39-203ENST00000396547 PRIMA1Q86XR5 153 aa7.15□□□□□ -1.26
TRIM39-203ENST00000396547 EDA2RQ9HAV5 297 aa7.15□□□□□ -1.26
TRIM39-203ENST00000396547 PIK3CD-AS1Q5SR53 167 aa7.15□□□□□ -1.27
TRIM39-203ENST00000396547 LINC00308Q8TCZ7 52 aa7.15□□□□□ -1.27
TRIM39-203ENST00000396547 LINC01587Q99440 93 aa7.15□□□□□ -1.27
TRIM39-203ENST00000396547 UBE2D4Q9Y2X8 147 aa7.15□□□□□ -1.27
TRIM39-203ENST00000396547 TINCRA0A1B0GVN0 87 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 WIPF1O43516 503 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 CFHR3Q02985 330 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 DEFB136Q30KP8 78 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 NRGNQ92686 78 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 CHCHD7Q9BUK0 85 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 HECTD1Q9ULT8 2610 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 SMIM9A6NGZ8 99 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 K7EQG2 157 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 TOMM7Q9P0U1 55 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 PYGO1Q9Y3Y4 419 aa7.14□□□□□ -1.27
TRIM39-203ENST00000396547 A6NDX4 124 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 IGHV4-59P01825 116 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 DSCR9P59020 149 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 APCP25054 2843 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 KHDC1LQ5JSQ8 128 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 SOSTDC1Q6X4U4 206 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 TLN2Q9Y4G6 2542 aa7.13□□□□□ -1.27
TRIM39-203ENST00000396547 MAPK1IP1LQ8NDC0 245 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 ZANQ9Y493 2812 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 IGKV3D-7A0A0C4DH55 119 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 COX7A2LO14548 114 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 AVPP01185 164 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 K7EMT4 169 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 TIRAPP58753 221 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 UBE2E2Q96LR5 201 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 FAM218AQ96MZ4 157 aa7.12□□□□□ -1.27
TRIM39-203ENST00000396547 SDIM1Q6ZPB5 146 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 JMJD1CQ15652 2540 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 ZNF469Q96JG9 3925 aaPredicted RBP7.11□□□□□ -1.27
TRIM39-203ENST00000396547 TRBV7-7A0A0K0K1E9 115 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 FAM240AA0A1B0GVK7 77 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 HERVK_113P63121 156 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 PIMREGQ9BSJ6 248 aa7.11□□□□□ -1.27
TRIM39-203ENST00000396547 H3BUA1 57 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 NDUFA1O15239 70 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 ITPR2Q14571 2701 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 ATP5G1P05496 136 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 C3orf22Q8N5N4 141 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 XCL2Q9UBD3 114 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 IGHV4-30-2A0A087WSY4 118 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 A0A096LNT2 108 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 SLURP1P55000 103 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 C18orf65Q6ZTR6 163 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 CCL19Q99731 98 aa7.1□□□□□ -1.27
TRIM39-203ENST00000396547 hADV29S1A0JD25 119 aa7.09□□□□□ -1.27
TRIM39-203ENST00000396547 KRTAP21-3Q3LHN1 58 aa7.09□□□□□ -1.27
TRIM39-203ENST00000396547 LINC00242Q5T6M2 205 aa7.09□□□□□ -1.27
TRIM39-203ENST00000396547 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
TRIM39-203ENST00000396547 TRGV1A0A0A0MS02 117 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 DEFB112Q30KQ8 113 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms