RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 NUP210LQ5VU65 1888 aa12.85□□□□□ -0.35
UBFD1-201ENST00000395878 NDUFV3P56181 108 aaKnown RBP12.85□□□□□ -0.35
UBFD1-201ENST00000395878 TSHBP01222 138 aa12.85□□□□□ -0.35
UBFD1-201ENST00000395878 MT-ATP8P03928 68 aa12.85□□□□□ -0.35
UBFD1-201ENST00000395878 KLLNB2CW77 178 aa12.84□□□□□ -0.35
UBFD1-201ENST00000395878 SPATA25Q9BR10 227 aa12.84□□□□□ -0.35
UBFD1-201ENST00000395878 SORL1Q92673 2214 aa12.84□□□□□ -0.35
UBFD1-201ENST00000395878 RBX1P62877 108 aa12.84□□□□□ -0.35
UBFD1-201ENST00000395878 DSCAMO60469 2012 aa12.84□□□□□ -0.35
UBFD1-201ENST00000395878 INAFM1C9JVW0 142 aa12.83□□□□□ -0.36
UBFD1-201ENST00000395878 Q8N976 141 aa12.83□□□□□ -0.36
UBFD1-201ENST00000395878 C11orf21Q9P2W6 132 aa12.83□□□□□ -0.36
UBFD1-201ENST00000395878 LINC00482Q8N8I6 264 aa12.82□□□□□ -0.36
UBFD1-201ENST00000395878 PRR9Q5T870 116 aa12.82□□□□□ -0.36
UBFD1-201ENST00000395878 SDIM1Q6ZPB5 146 aa12.82□□□□□ -0.36
UBFD1-201ENST00000395878 FAM19A1Q7Z5A9 133 aa12.82□□□□□ -0.36
UBFD1-201ENST00000395878 COL4A4P53420 1690 aaPredicted RBP12.82□□□□□ -0.36
UBFD1-201ENST00000395878 SLPIP03973 132 aa12.82□□□□□ -0.36
UBFD1-201ENST00000395878 UQCRQO14949 82 aa12.82□□□□□ -0.36
UBFD1-201ENST00000395878 IGLV1-40P01703 118 aa12.81□□□□□ -0.36
UBFD1-201ENST00000395878 RNF183Q96D59 192 aa12.81□□□□□ -0.36
UBFD1-201ENST00000395878 C9orf85Q96MD7 179 aa12.81□□□□□ -0.36
UBFD1-201ENST00000395878 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
UBFD1-201ENST00000395878 POLR2KP53803 58 aaKnown RBP12.8□□□□□ -0.36
UBFD1-201ENST00000395878 SHISA2Q6UWI4 295 aa12.8□□□□□ -0.36
UBFD1-201ENST00000395878 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
UBFD1-201ENST00000395878 SYCNQ0VAF6 134 aa12.8□□□□□ -0.36
UBFD1-201ENST00000395878 KIR2DL5BQ8NHK3 375 aa12.8□□□□□ -0.36
UBFD1-201ENST00000395878 PLXNB1O43157 2135 aa12.8□□□□□ -0.36
UBFD1-201ENST00000395878 BBC3Q96PG8 261 aaPredicted RBP12.8□□□□□ -0.36
UBFD1-201ENST00000395878 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
UBFD1-201ENST00000395878 MRPS36P82909 103 aaKnown RBP12.79□□□□□ -0.36
UBFD1-201ENST00000395878 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
UBFD1-201ENST00000395878 C20orf197Q8N268 126 aa12.79□□□□□ -0.36
UBFD1-201ENST00000395878 NAV3Q8IVL0 2385 aa12.79□□□□□ -0.36
UBFD1-201ENST00000395878 C2orf91Q6ZV80 131 aa12.78□□□□□ -0.36
UBFD1-201ENST00000395878 IGKV4-1P06312 121 aa12.78□□□□□ -0.36
UBFD1-201ENST00000395878 UBE2D4Q9Y2X8 147 aa12.78□□□□□ -0.36
UBFD1-201ENST00000395878 C10orf142B7Z368 130 aa12.78□□□□□ -0.36
UBFD1-201ENST00000395878 CNFNQ9BYD5 112 aa12.77□□□□□ -0.36
UBFD1-201ENST00000395878 A0A087WZ39 114 aa12.77□□□□□ -0.36
UBFD1-201ENST00000395878 MUC22E2RYF6 1773 aaPredicted RBP12.77□□□□□ -0.37
UBFD1-201ENST00000395878 ENHOQ6UWT2 76 aa12.77□□□□□ -0.37
UBFD1-201ENST00000395878 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
UBFD1-201ENST00000395878 LINC01006Q8NI28 216 aa12.77□□□□□ -0.37
UBFD1-201ENST00000395878 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.37
UBFD1-201ENST00000395878 DCANP1Q8TF63 244 aa12.76□□□□□ -0.37
UBFD1-201ENST00000395878 A8MZ25 164 aa12.76□□□□□ -0.37
UBFD1-201ENST00000395878 TRAV10A0A0B4J240 114 aa12.75□□□□□ -0.37
UBFD1-201ENST00000395878 SEC61GP60059 68 aa12.75□□□□□ -0.37
UBFD1-201ENST00000395878 FAM19A5Q7Z5A7 132 aaPredicted RBP12.75□□□□□ -0.37
UBFD1-201ENST00000395878 MYO18BQ8IUG5 2567 aa12.74□□□□□ -0.37
UBFD1-201ENST00000395878 A0A096LNI7 61 aa12.74□□□□□ -0.37
UBFD1-201ENST00000395878 MRPS12O15235 138 aaKnown RBP12.74□□□□□ -0.37
UBFD1-201ENST00000395878 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
UBFD1-201ENST00000395878 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
UBFD1-201ENST00000395878 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
UBFD1-201ENST00000395878 LINC00959A0A1B0GUT2 108 aa12.73□□□□□ -0.37
UBFD1-201ENST00000395878 LST1O00453 97 aa12.73□□□□□ -0.37
UBFD1-201ENST00000395878 LELP1Q5T871 98 aa12.73□□□□□ -0.37
UBFD1-201ENST00000395878 UBE2D1P51668 147 aa12.73□□□□□ -0.37
UBFD1-201ENST00000395878 CCKP06307 115 aa12.73□□□□□ -0.37
UBFD1-201ENST00000395878 Q6ZS46 218 aa12.72□□□□□ -0.37
UBFD1-201ENST00000395878 FAM236DA0A1B0GTK5 79 aa12.72□□□□□ -0.37
UBFD1-201ENST00000395878 FAM236CP0DP71 79 aa12.72□□□□□ -0.37
UBFD1-201ENST00000395878 C3orf22Q8N5N4 141 aa12.72□□□□□ -0.37
UBFD1-201ENST00000395878 LY6G6DO95868 133 aa12.72□□□□□ -0.37
UBFD1-201ENST00000395878 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
UBFD1-201ENST00000395878 M0R378 163 aa12.71□□□□□ -0.37
UBFD1-201ENST00000395878 GAS8-AS1O95177 125 aa12.71□□□□□ -0.38
UBFD1-201ENST00000395878 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.38
UBFD1-201ENST00000395878 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
UBFD1-201ENST00000395878 HCFC1P51610 2035 aa12.7□□□□□ -0.38
UBFD1-201ENST00000395878 USP17L23D6RBM5 183 aa12.7□□□□□ -0.38
UBFD1-201ENST00000395878 KPRPQ5T749 579 aaPredicted RBP12.7□□□□□ -0.38
UBFD1-201ENST00000395878 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
UBFD1-201ENST00000395878 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 UBE2D3P61077 147 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 UBE2D2P62837 147 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 Q6ZQY7 126 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.69□□□□□ -0.38
UBFD1-201ENST00000395878 IMUPQ9GZP8 106 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 C1orf158Q8N1D5 194 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 IGLV4-69A0A075B6H9 119 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 COX17Q14061 63 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 MUC7Q8TAX7 377 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 C2CD3Q4AC94 2353 aa12.69□□□□□ -0.38
UBFD1-201ENST00000395878 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.68□□□□□ -0.38
UBFD1-201ENST00000395878 BRK1Q8WUW1 75 aa12.68□□□□□ -0.38
UBFD1-201ENST00000395878 TANC2Q9HCD6 1990 aa12.68□□□□□ -0.38
UBFD1-201ENST00000395878 IGIPA6NJ69 53 aa12.67□□□□□ -0.38
UBFD1-201ENST00000395878 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
UBFD1-201ENST00000395878 SMIM11BQ8TCY0 68 aa12.67□□□□□ -0.38
UBFD1-201ENST00000395878 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
UBFD1-201ENST00000395878 CEP192Q8TEP8 1941 aa12.66□□□□□ -0.38
UBFD1-201ENST00000395878 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
UBFD1-201ENST00000395878 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
UBFD1-201ENST00000395878 Q8IZM0 81 aa12.66□□□□□ -0.38
UBFD1-201ENST00000395878 CASC2Q6XLA1 102 aa12.65□□□□□ -0.38
UBFD1-201ENST00000395878 PRM2P04554 102 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms