RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 A0A087WTM6 91 aa11.03□□□□□ -0.64
CXCL1-201ENST00000395761 BAGE3Q86Y29 109 aa11.03□□□□□ -0.64
CXCL1-201ENST00000395761 AP5S1Q9NUS5 200 aa11.03□□□□□ -0.64
CXCL1-201ENST00000395761 IGLV4-60A0A075B6I1 120 aa11.02□□□□□ -0.65
CXCL1-201ENST00000395761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.02□□□□□ -0.65
CXCL1-201ENST00000395761 IGKV2-29A2NJV5 120 aaPredicted RBP11.02□□□□□ -0.65
CXCL1-201ENST00000395761 UBE2L6O14933 153 aa11.02□□□□□ -0.65
CXCL1-201ENST00000395761 PSCAO43653 123 aa11.02□□□□□ -0.65
CXCL1-201ENST00000395761 G0S2P27469 103 aa11.02□□□□□ -0.65
CXCL1-201ENST00000395761 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.65
CXCL1-201ENST00000395761 C20orf203Q8NBC4 194 aa11.02□□□□□ -0.65
CXCL1-201ENST00000395761 TM2D2Q9BX73 214 aa11.02□□□□□ -0.65
CXCL1-201ENST00000395761 A0A1B0GUV1 79 aa11.01□□□□□ -0.65
CXCL1-201ENST00000395761 KRTAP10-2P60368 255 aa11.01□□□□□ -0.65
CXCL1-201ENST00000395761 SPATA12Q7Z6I5 190 aa11.01□□□□□ -0.65
CXCL1-201ENST00000395761 LINC00269Q8N2A0 174 aa11.01□□□□□ -0.65
CXCL1-201ENST00000395761 MAPKAPK5-AS1Q8N8E1 139 aa11.01□□□□□ -0.65
CXCL1-201ENST00000395761 TMEM18Q96B42 140 aa11.01□□□□□ -0.65
CXCL1-201ENST00000395761 IGKV2D-24A0A075B6R9 120 aa11□□□□□ -0.65
CXCL1-201ENST00000395761 LRCOL1A6NCL2 159 aa11□□□□□ -0.65
CXCL1-201ENST00000395761 LINC00310P59036 64 aa11□□□□□ -0.65
CXCL1-201ENST00000395761 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
CXCL1-201ENST00000395761 PKHD1P08F94 4074 aa11□□□□□ -0.65
CXCL1-201ENST00000395761 DYNC1H1Q14204 4646 aaKnown RBP10.99□□□□□ -0.65
CXCL1-201ENST00000395761 LINC01549A6NIU2 74 aa10.99□□□□□ -0.65
CXCL1-201ENST00000395761 CRPP02741 224 aa10.99□□□□□ -0.65
CXCL1-201ENST00000395761 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
CXCL1-201ENST00000395761 RNASEKQ6P5S7 137 aaKnown RBP10.99□□□□□ -0.65
CXCL1-201ENST00000395761 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
CXCL1-201ENST00000395761 PRR34Q9NV39 138 aa10.99□□□□□ -0.65
CXCL1-201ENST00000395761 SERF1AO75920 110 aa10.98□□□□□ -0.65
CXCL1-201ENST00000395761 FGF6P10767 208 aa10.98□□□□□ -0.65
CXCL1-201ENST00000395761 RMI2Q96E14 147 aa10.98□□□□□ -0.65
CXCL1-201ENST00000395761 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
CXCL1-201ENST00000395761 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
CXCL1-201ENST00000395761 EREGO14944 169 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 NUPR1O60356 82 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 NDUFA6P56556 154 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 REG3AQ06141 175 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 WFDC2Q14508 124 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 AMMECR1LQ6DCA0 310 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 C2orf66Q6UXQ4 117 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 TOMM6Q96B49 74 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 CYSLTR1Q9Y271 337 aa10.97□□□□□ -0.65
CXCL1-201ENST00000395761 A0A096LNJ9 63 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 HSBP1O75506 76 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 ZNF25P17030 456 aaPredicted RBP10.96□□□□□ -0.65
CXCL1-201ENST00000395761 RPL39P62891 51 aaKnown RBP10.96□□□□□ -0.65
CXCL1-201ENST00000395761 MIAQ16674 131 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 BAALCQ8WXS3 180 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 COX11Q9Y6N1 276 aa10.96□□□□□ -0.65
CXCL1-201ENST00000395761 C16orf90A8MZG2 172 aa10.95□□□□□ -0.66
CXCL1-201ENST00000395761 LECT2O14960 151 aa10.95□□□□□ -0.66
CXCL1-201ENST00000395761 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
CXCL1-201ENST00000395761 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
CXCL1-201ENST00000395761 HBDP02042 147 aa10.94□□□□□ -0.66
CXCL1-201ENST00000395761 NPSP0C0P6 89 aa10.94□□□□□ -0.66
CXCL1-201ENST00000395761 IGIPA6NJ69 53 aa10.93□□□□□ -0.66
CXCL1-201ENST00000395761 PDZD11Q5EBL8 140 aa10.93□□□□□ -0.66
CXCL1-201ENST00000395761 KRTAP26-1Q6PEX3 210 aa10.93□□□□□ -0.66
CXCL1-201ENST00000395761 ERASQ7Z444 233 aa10.93□□□□□ -0.66
CXCL1-201ENST00000395761 DNAH5Q8TE73 4624 aa10.93□□□□□ -0.66
CXCL1-201ENST00000395761 IGKV3OR2-268A0A0C4DH90 116 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 MRPS36P82909 103 aaKnown RBP10.92□□□□□ -0.66
CXCL1-201ENST00000395761 PMCHL1Q16048 86 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 FAM19A2Q8N3H0 131 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 Q8N814 137 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 TMEM101Q96IK0 257 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 TIMM17AQ99595 171 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 CDC42SE2Q9NRR3 84 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
CXCL1-201ENST00000395761 S100A6P06703 90 aa10.91□□□□□ -0.66
CXCL1-201ENST00000395761 DGAT2L7PQ6IED9 249 aa10.91□□□□□ -0.66
CXCL1-201ENST00000395761 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
CXCL1-201ENST00000395761 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
CXCL1-201ENST00000395761 TMEM141Q96I45 108 aa10.91□□□□□ -0.66
CXCL1-201ENST00000395761 SCGB3A1Q96QR1 104 aa10.91□□□□□ -0.66
CXCL1-201ENST00000395761 ZNF664Q8N3J9 261 aa10.9□□□□□ -0.66
CXCL1-201ENST00000395761 PACRGQ96M98 296 aaPredicted RBP10.9□□□□□ -0.66
CXCL1-201ENST00000395761 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
CXCL1-201ENST00000395761 TRAV8-4A0A0B4J246 113 aa10.89□□□□□ -0.67
CXCL1-201ENST00000395761 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
CXCL1-201ENST00000395761 C5orf52A6NGY3 159 aa10.88□□□□□ -0.67
CXCL1-201ENST00000395761 ATP5LO75964 103 aa10.88□□□□□ -0.67
CXCL1-201ENST00000395761 PAPPA-AS1Q5QFB9 102 aa10.88□□□□□ -0.67
CXCL1-201ENST00000395761 KIAA1109Q2LD37 5005 aa10.87□□□□□ -0.67
CXCL1-201ENST00000395761 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.87□□□□□ -0.67
CXCL1-201ENST00000395761 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
CXCL1-201ENST00000395761 OPRPNQ99935 248 aaPredicted RBP10.87□□□□□ -0.67
CXCL1-201ENST00000395761 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.86□□□□□ -0.67
CXCL1-201ENST00000395761 IGLV5-52A0A0A0MRZ9 124 aa10.86□□□□□ -0.67
CXCL1-201ENST00000395761 USP17L23D6RBM5 183 aa10.86□□□□□ -0.67
CXCL1-201ENST00000395761 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
CXCL1-201ENST00000395761 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
CXCL1-201ENST00000395761 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
CXCL1-201ENST00000395761 Q6ZUT4 128 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms