RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 OPRPNQ99935 248 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-202ENST00000395354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-202ENST00000395354 TEX48A0A1B0GUV7 120 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-202ENST00000395354 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 NTM-AS1Q6ZSK4 140 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 FAM104AQ969W3 186 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 PRO0255Q9UI72 69 aa13.54□□□□□ -0.24
LMNB1-202ENST00000395354 C11orf86A6NJI1 115 aa13.53□□□□□ -0.24
LMNB1-202ENST00000395354 H7C423 109 aa13.53□□□□□ -0.24
LMNB1-202ENST00000395354 SPART-AS1P0CW21 52 aa13.53□□□□□ -0.24
LMNB1-202ENST00000395354 C2orf88Q9BSF0 95 aa13.53□□□□□ -0.24
LMNB1-202ENST00000395354 CSDC2Q9Y534 153 aaKnown RBP13.53□□□□□ -0.24
LMNB1-202ENST00000395354 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
LMNB1-202ENST00000395354 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.25
LMNB1-202ENST00000395354 EREGO14944 169 aa13.52□□□□□ -0.25
LMNB1-202ENST00000395354 DAD1P61803 113 aa13.52□□□□□ -0.25
LMNB1-202ENST00000395354 E9PLD3 99 aa13.5□□□□□ -0.25
LMNB1-202ENST00000395354 HERVK_113P61574 105 aa13.5□□□□□ -0.25
LMNB1-202ENST00000395354 C2orf91Q6ZV80 131 aa13.5□□□□□ -0.25
LMNB1-202ENST00000395354 PCP2Q8IVA1 136 aa13.5□□□□□ -0.25
LMNB1-202ENST00000395354 CELA1Q9UNI1 258 aa13.5□□□□□ -0.25
LMNB1-202ENST00000395354 TCTAP57738 103 aa13.49□□□□□ -0.25
LMNB1-202ENST00000395354 TMEM243Q9BU79 118 aa13.49□□□□□ -0.25
LMNB1-202ENST00000395354 TP73-AS1Q9UF72 201 aa13.49□□□□□ -0.25
LMNB1-202ENST00000395354 TRBV25-1A0A075B6N4 114 aa13.49□□□□□ -0.25
LMNB1-202ENST00000395354 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
LMNB1-202ENST00000395354 CEMP1Q6PRD7 247 aaPredicted RBP13.49□□□□□ -0.25
LMNB1-202ENST00000395354 C11orf45Q8TAV5 145 aa13.49□□□□□ -0.25
LMNB1-202ENST00000395354 ATP5G1P05496 136 aa13.48□□□□□ -0.25
LMNB1-202ENST00000395354 CHAC1Q9BUX1 264 aa13.48□□□□□ -0.25
LMNB1-202ENST00000395354 GYPEP15421 78 aa13.47□□□□□ -0.25
LMNB1-202ENST00000395354 Q6ZUT4 128 aa13.47□□□□□ -0.25
LMNB1-202ENST00000395354 PAX4O43316 350 aa13.46□□□□□ -0.25
LMNB1-202ENST00000395354 HIGD1BQ9P298 99 aa13.46□□□□□ -0.25
LMNB1-202ENST00000395354 TRBV6-8A0A0A6YYG3 113 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 UBE2L6O14933 153 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 NANOS2P60321 138 aaKnown RBP13.45□□□□□ -0.26
LMNB1-202ENST00000395354 C12orf74Q32Q52 190 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 TMEM170BQ5T4T1 132 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 ATP6V0E2Q8NHE4 81 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 A0A0J9YXV3 536 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 TINCRA0A1B0GVN0 87 aa13.45□□□□□ -0.26
LMNB1-202ENST00000395354 ZNF25P17030 456 aaPredicted RBP13.45□□□□□ -0.26
LMNB1-202ENST00000395354 TRAV8-6A0A0B4J262 113 aa13.44□□□□□ -0.26
LMNB1-202ENST00000395354 TMEM223A0PJW6 202 aa13.43□□□□□ -0.26
LMNB1-202ENST00000395354 ZNF22P17026 224 aaPredicted RBP13.43□□□□□ -0.26
LMNB1-202ENST00000395354 HINT1P49773 126 aaPredicted RBP13.43□□□□□ -0.26
LMNB1-202ENST00000395354 BATFQ16520 125 aa13.43□□□□□ -0.26
LMNB1-202ENST00000395354 AMMECR1LQ6DCA0 310 aa13.43□□□□□ -0.26
LMNB1-202ENST00000395354 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
LMNB1-202ENST00000395354 TMEM101Q96IK0 257 aa13.43□□□□□ -0.26
LMNB1-202ENST00000395354 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
LMNB1-202ENST00000395354 UBE2D1P51668 147 aa13.42□□□□□ -0.26
LMNB1-202ENST00000395354 MPV17L2Q567V2 206 aa13.42□□□□□ -0.26
LMNB1-202ENST00000395354 COL5A1-AS1Q5SY13 56 aa13.42□□□□□ -0.26
LMNB1-202ENST00000395354 FAM19A3Q7Z5A8 133 aa13.42□□□□□ -0.26
LMNB1-202ENST00000395354 TRAV26-1A0A087WT03 109 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 TIRAPP58753 221 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 HSD52Q0P140 79 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 MAPKAPK5-AS1Q8N8E1 139 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 VSIG2Q96IQ7 327 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 TTTY13Q9BZ97 58 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 CDC42SE2Q9NRR3 84 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 SEC11AP67812 179 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
LMNB1-202ENST00000395354 BVES-AS1Q5T3Y7 98 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 Q6ZTC4 211 aa13.41□□□□□ -0.26
LMNB1-202ENST00000395354 SH2D6Q7Z4S9 175 aa13.4□□□□□ -0.26
LMNB1-202ENST00000395354 F5H768 121 aa13.39□□□□□ -0.27
LMNB1-202ENST00000395354 LEPROTO15243 131 aa13.39□□□□□ -0.27
LMNB1-202ENST00000395354 IGLV5-45A0A087WSX0 123 aa13.37□□□□□ -0.27
LMNB1-202ENST00000395354 PLEKHB2Q96CS7 222 aa13.37□□□□□ -0.27
LMNB1-202ENST00000395354 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
LMNB1-202ENST00000395354 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
LMNB1-202ENST00000395354 HTN3P15516 51 aa13.37□□□□□ -0.27
LMNB1-202ENST00000395354 HERVK_113P63121 156 aa13.37□□□□□ -0.27
LMNB1-202ENST00000395354 MRPL23Q16540 153 aaKnown RBP13.37□□□□□ -0.27
LMNB1-202ENST00000395354 WWC2-AS2Q96NR7 200 aa13.37□□□□□ -0.27
LMNB1-202ENST00000395354 A0A0J9YY99 117 aa13.36□□□□□ -0.27
LMNB1-202ENST00000395354 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
LMNB1-202ENST00000395354 J3QQQ9 107 aa13.36□□□□□ -0.27
LMNB1-202ENST00000395354 GAGE6Q13070 117 aa13.36□□□□□ -0.27
LMNB1-202ENST00000395354 TAL2Q16559 108 aa13.36□□□□□ -0.27
LMNB1-202ENST00000395354 DEFB131BA0A096LNP1 70 aa13.35□□□□□ -0.27
LMNB1-202ENST00000395354 H3BRM9 83 aa13.35□□□□□ -0.27
LMNB1-202ENST00000395354 TRAV10A0A0B4J240 114 aa13.34□□□□□ -0.27
LMNB1-202ENST00000395354 H3BNG1 76 aa13.34□□□□□ -0.27
LMNB1-202ENST00000395354 LGALS3P17931 250 aaKnown RBP13.34□□□□□ -0.27
LMNB1-202ENST00000395354 ICOSQ9Y6W8 199 aa13.34□□□□□ -0.27
LMNB1-202ENST00000395354 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
LMNB1-202ENST00000395354 LINC00242Q5T6M2 205 aa13.33□□□□□ -0.28
LMNB1-202ENST00000395354 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
LMNB1-202ENST00000395354 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
LMNB1-202ENST00000395354 IGHV1-58A0A0C4DH39 117 aa13.32□□□□□ -0.28
LMNB1-202ENST00000395354 TSPEAR-AS2P59090 65 aa13.32□□□□□ -0.28
LMNB1-202ENST00000395354 A0A1B0GV90 55 aa13.32□□□□□ -0.28
LMNB1-202ENST00000395354 IGLV4-60A0A075B6I1 120 aa13.3□□□□□ -0.28
LMNB1-202ENST00000395354 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms