RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TCL1BO95988 128 aa10.93□□□□□ -0.66
CPSF7-202ENST00000394888 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
CPSF7-202ENST00000394888 MTORP42345 2549 aa10.92□□□□□ -0.66
CPSF7-202ENST00000394888 NOTCH3Q9UM47 2321 aa10.92□□□□□ -0.66
CPSF7-202ENST00000394888 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPSF7-202ENST00000394888 IGHV3-33P01772 117 aa10.91□□□□□ -0.66
CPSF7-202ENST00000394888 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
CPSF7-202ENST00000394888 STHQ8IWL8 128 aa10.91□□□□□ -0.66
CPSF7-202ENST00000394888 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
CPSF7-202ENST00000394888 APOMO95445 188 aa10.91□□□□□ -0.66
CPSF7-202ENST00000394888 LGALS3P17931 250 aaKnown RBP10.91□□□□□ -0.66
CPSF7-202ENST00000394888 FAM110AQ9BQ89 295 aa10.9□□□□□ -0.66
CPSF7-202ENST00000394888 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
CPSF7-202ENST00000394888 DAZ2Q13117 558 aaKnown RBP10.9□□□□□ -0.66
CPSF7-202ENST00000394888 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
CPSF7-202ENST00000394888 SPINK8P0C7L1 97 aa10.9□□□□□ -0.66
CPSF7-202ENST00000394888 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.66
CPSF7-202ENST00000394888 HILS1P60008 231 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 ETDBQ3ZM63 59 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 F5H768 121 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 NSD1Q96L73 2696 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-202ENST00000394888 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 ZFAND6Q6FIF0 208 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 CARD19Q96LW7 228 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
CPSF7-202ENST00000394888 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 LOC100131303A0A0U1RQF7 123 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 TMEM238LA0A1B0GVL6 79 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 A6NJY4 79 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 GAGE13Q4V321 117 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 VPS25Q9BRG1 176 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 TRGV1A0A0A0MS02 117 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 K7EQD1 137 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 OVOL2Q9BRP0 275 aa10.88□□□□□ -0.67
CPSF7-202ENST00000394888 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
CPSF7-202ENST00000394888 TIRAPP58753 221 aa10.87□□□□□ -0.67
CPSF7-202ENST00000394888 SCGB2A2Q13296 93 aa10.87□□□□□ -0.67
CPSF7-202ENST00000394888 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
CPSF7-202ENST00000394888 CSDC2Q9Y534 153 aaKnown RBP10.87□□□□□ -0.67
CPSF7-202ENST00000394888 YAE1D1Q9NRH1 226 aa10.87□□□□□ -0.67
CPSF7-202ENST00000394888 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
CPSF7-202ENST00000394888 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
CPSF7-202ENST00000394888 COTL1Q14019 142 aa10.85□□□□□ -0.67
CPSF7-202ENST00000394888 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
CPSF7-202ENST00000394888 CDC42SE2Q9NRR3 84 aa10.85□□□□□ -0.67
CPSF7-202ENST00000394888 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
CPSF7-202ENST00000394888 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
CPSF7-202ENST00000394888 LINC01600Q96MT4 127 aa10.84□□□□□ -0.67
CPSF7-202ENST00000394888 SPATA25Q9BR10 227 aa10.84□□□□□ -0.67
CPSF7-202ENST00000394888 MIAQ16674 131 aa10.83□□□□□ -0.67
CPSF7-202ENST00000394888 NDUFA12Q9UI09 145 aa10.83□□□□□ -0.67
CPSF7-202ENST00000394888 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
CPSF7-202ENST00000394888 NDUFA1O15239 70 aa10.83□□□□□ -0.68
CPSF7-202ENST00000394888 PSMB2P49721 201 aa10.83□□□□□ -0.68
CPSF7-202ENST00000394888 LINC00612Q8N6U2 182 aa10.82□□□□□ -0.68
CPSF7-202ENST00000394888 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
CPSF7-202ENST00000394888 GTSF1LQ9H1H1 148 aa10.82□□□□□ -0.68
CPSF7-202ENST00000394888 FHL2Q14192 279 aa10.82□□□□□ -0.68
CPSF7-202ENST00000394888 SOSTDC1Q6X4U4 206 aa10.82□□□□□ -0.68
CPSF7-202ENST00000394888 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
CPSF7-202ENST00000394888 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
CPSF7-202ENST00000394888 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
CPSF7-202ENST00000394888 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
CPSF7-202ENST00000394888 RPL35AP18077 110 aaKnown RBP10.81□□□□□ -0.68
CPSF7-202ENST00000394888 DAZ4Q86SG3 579 aaKnown RBP10.81□□□□□ -0.68
CPSF7-202ENST00000394888 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
CPSF7-202ENST00000394888 C16orf74Q96GX8 76 aa10.81□□□□□ -0.68
CPSF7-202ENST00000394888 DAZ3Q9NR90 486 aaKnown RBP10.81□□□□□ -0.68
CPSF7-202ENST00000394888 TRIAP1O43715 76 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 TIMM17BO60830 172 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 FOXI1Q12951 378 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 HIVEP1P15822 2718 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 LOC107984156A0A0G2JMH3 177 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 ARL17AQ8IVW1 177 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 RNF183Q96D59 192 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 DAND5Q8N907 189 aa10.8□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE12JA6NER3 117 aa10.79□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE4Q13068 117 aa10.79□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE5Q13069 117 aa10.79□□□□□ -0.68
CPSF7-202ENST00000394888 J3QKU1 62 aa10.79□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE7O76087 117 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 TRBV30A0A0K0K1B3 111 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 X6R8D5 127 aa10.78□□□□□ -0.68
CPSF7-202ENST00000394888 M0QXV9 152 aa10.77□□□□□ -0.68
CPSF7-202ENST00000394888 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
CPSF7-202ENST00000394888 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
CPSF7-202ENST00000394888 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
CPSF7-202ENST00000394888 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
CPSF7-202ENST00000394888 DNAH1Q9P2D7 4330 aa10.76□□□□□ -0.69
CPSF7-202ENST00000394888 GAGE12HA6NDE8 117 aa10.76□□□□□ -0.69
CPSF7-202ENST00000394888 NPC2P61916 151 aa10.76□□□□□ -0.69
CPSF7-202ENST00000394888 ZNF418Q8TF45 676 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-202ENST00000394888 LY6G6DO95868 133 aa10.76□□□□□ -0.69
CPSF7-202ENST00000394888 HECTD1Q9ULT8 2610 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms