RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
GABRA1-202ENST00000393943 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 XCL1P47992 114 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.28□□□□□ -1.4
GABRA1-202ENST00000393943 ARHGAP32A7KAX9 2087 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 DEFB130BP0DP73 79 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 DEFB130AP0DP74 79 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
GABRA1-202ENST00000393943 BCE1O60756 84 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 CCKP06307 115 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 MRAPQ8TCY5 172 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 A8MZ25 164 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 CFHR3Q02985 330 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 COX17Q14061 63 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 SHISA2Q6UWI4 295 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 SMIM11BQ8TCY0 68 aa6.27□□□□□ -1.41
GABRA1-202ENST00000393943 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
GABRA1-202ENST00000393943 RNF223E7ERA6 249 aa6.26□□□□□ -1.41
GABRA1-202ENST00000393943 SPTBN2O15020 2390 aa6.26□□□□□ -1.41
GABRA1-202ENST00000393943 CCL24O00175 119 aa6.26□□□□□ -1.41
GABRA1-202ENST00000393943 PRRC2AP48634 2157 aaKnown RBP6.26□□□□□ -1.41
GABRA1-202ENST00000393943 FHL3Q13643 280 aa6.26□□□□□ -1.41
GABRA1-202ENST00000393943 PROK1P58294 105 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 DEFB114Q30KQ6 69 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 ANGP03950 147 aaKnown RBP6.25□□□□□ -1.41
GABRA1-202ENST00000393943 WDR87Q6ZQQ6 2873 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 NHLRC4P0CG21 123 aaPredicted RBP6.25□□□□□ -1.41
GABRA1-202ENST00000393943 DIRC1Q969H9 104 aa6.25□□□□□ -1.41
GABRA1-202ENST00000393943 OTOGLQ3ZCN5 2332 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 DEFB136Q30KP8 78 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 NCR3O14931 201 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 Q6YL49 198 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 LITAFQ99732 161 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 GYPEP15421 78 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 Q6ZTI0 123 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 FAM19A5Q7Z5A7 132 aaPredicted RBP6.24□□□□□ -1.41
GABRA1-202ENST00000393943 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
GABRA1-202ENST00000393943 DAD1P61803 113 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 Q8IZM0 81 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 CUL9Q8IWT3 2517 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 APOC4P55056 127 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 CCL18P55774 89 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 COL27A1Q8IZC6 1860 aaPredicted RBP6.23□□□□□ -1.41
GABRA1-202ENST00000393943 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 NBASA2RRP1 2371 aa6.23□□□□□ -1.41
GABRA1-202ENST00000393943 F8WEM9 126 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
GABRA1-202ENST00000393943 PRO0255Q9UI72 69 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 CEP350Q5VT06 3117 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 DOPEY2Q9Y3R5 2298 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 A0A087WZ39 114 aa6.22□□□□□ -1.41
GABRA1-202ENST00000393943 Q6ZSV7 163 aa6.21□□□□□ -1.41
GABRA1-202ENST00000393943 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.42
GABRA1-202ENST00000393943 NREPQ16612 68 aa6.21□□□□□ -1.42
GABRA1-202ENST00000393943 HTN3P15516 51 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 COX6A2Q02221 97 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 FAM19A3Q7Z5A8 133 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 COX7BP24311 80 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 SPAG11BQ08648 103 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 ZNF702PQ9H963 129 aa6.2□□□□□ -1.42
GABRA1-202ENST00000393943 ZNF575Q86XF7 245 aa6.19□□□□□ -1.42
GABRA1-202ENST00000393943 Q8N814 137 aa6.19□□□□□ -1.42
GABRA1-202ENST00000393943 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
GABRA1-202ENST00000393943 HIGD2BQ4VC39 106 aa6.19□□□□□ -1.42
GABRA1-202ENST00000393943 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
GABRA1-202ENST00000393943 SLPIP03973 132 aa6.18□□□□□ -1.42
GABRA1-202ENST00000393943 A0A087WYN8 130 aa6.18□□□□□ -1.42
GABRA1-202ENST00000393943 F5H768 121 aa6.18□□□□□ -1.42
GABRA1-202ENST00000393943 LYRM9A8MSI8 78 aa6.18□□□□□ -1.42
GABRA1-202ENST00000393943 C6orf99Q4VX62 202 aa6.18□□□□□ -1.42
GABRA1-202ENST00000393943 CLPSL2Q6UWE3 100 aa6.18□□□□□ -1.42
GABRA1-202ENST00000393943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.17□□□□□ -1.42
GABRA1-202ENST00000393943 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
GABRA1-202ENST00000393943 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
GABRA1-202ENST00000393943 C11orf72Q8NBR9 251 aa6.16□□□□□ -1.42
GABRA1-202ENST00000393943 NTM-AS1Q6ZSK4 140 aa6.16□□□□□ -1.42
GABRA1-202ENST00000393943 CHCHD10Q8WYQ3 142 aaPredicted RBP6.16□□□□□ -1.42
GABRA1-202ENST00000393943 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
GABRA1-202ENST00000393943 REG3AQ06141 175 aa6.16□□□□□ -1.42
GABRA1-202ENST00000393943 Q96MF0 132 aa6.16□□□□□ -1.42
GABRA1-202ENST00000393943 CAMK2N2Q96S95 79 aa6.15□□□□□ -1.42
GABRA1-202ENST00000393943 A8MTW9 85 aa6.15□□□□□ -1.42
GABRA1-202ENST00000393943 DEFB113Q30KQ7 82 aa6.15□□□□□ -1.42
GABRA1-202ENST00000393943 Q6ZSN1 163 aa6.15□□□□□ -1.42
GABRA1-202ENST00000393943 CENPFP49454 3210 aa6.15□□□□□ -1.43
GABRA1-202ENST00000393943 BPY2O14599 106 aa6.15□□□□□ -1.43
GABRA1-202ENST00000393943 CXCL6P80162 114 aa6.15□□□□□ -1.43
GABRA1-202ENST00000393943 PTPRQQ9UMZ3 2332 aa6.15□□□□□ -1.43
GABRA1-202ENST00000393943 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms