RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CMYA5Q8N3K9 4069 aa15.62■□□□□ 0.09
HMGA2-203ENST00000393578 PKD1L1Q8TDX9 2849 aa15.62■□□□□ 0.09
HMGA2-203ENST00000393578 SMAGPQ0VAQ4 97 aa15.62■□□□□ 0.09
HMGA2-203ENST00000393578 RNASE13Q5GAN3 156 aaKnown RBP15.61■□□□□ 0.09
HMGA2-203ENST00000393578 PRO0255Q9UI72 69 aa15.61■□□□□ 0.09
HMGA2-203ENST00000393578 COL6A5A8TX70 2615 aa15.61■□□□□ 0.09
HMGA2-203ENST00000393578 HSD52Q0P140 79 aa15.6■□□□□ 0.09
HMGA2-203ENST00000393578 TMEM243Q9BU79 118 aa15.6■□□□□ 0.09
HMGA2-203ENST00000393578 MYMXA0A1B0GTQ4 84 aa15.6■□□□□ 0.09
HMGA2-203ENST00000393578 ZNF22P17026 224 aaPredicted RBP15.59■□□□□ 0.09
HMGA2-203ENST00000393578 DAD1P61803 113 aa15.59■□□□□ 0.09
HMGA2-203ENST00000393578 H7C423 109 aa15.58■□□□□ 0.09
HMGA2-203ENST00000393578 TMEM223A0PJW6 202 aa15.58■□□□□ 0.08
HMGA2-203ENST00000393578 SPART-AS1P0CW21 52 aa15.58■□□□□ 0.08
HMGA2-203ENST00000393578 TINCRA0A1B0GVN0 87 aa15.57■□□□□ 0.08
HMGA2-203ENST00000393578 UBE2L6O14933 153 aa15.57■□□□□ 0.08
HMGA2-203ENST00000393578 GYPEP15421 78 aa15.57■□□□□ 0.08
HMGA2-203ENST00000393578 TRBV6-8A0A0A6YYG3 113 aa15.56■□□□□ 0.08
HMGA2-203ENST00000393578 G3V4G9 280 aa15.56■□□□□ 0.08
HMGA2-203ENST00000393578 CELA1Q9UNI1 258 aa15.56■□□□□ 0.08
HMGA2-203ENST00000393578 UBE2D1P51668 147 aa15.55■□□□□ 0.08
HMGA2-203ENST00000393578 ZNF815PA8K554 130 aa15.55■□□□□ 0.08
HMGA2-203ENST00000393578 SEC11AP67812 179 aa15.55■□□□□ 0.08
HMGA2-203ENST00000393578 AMMECR1LQ6DCA0 310 aa15.55■□□□□ 0.08
HMGA2-203ENST00000393578 OR5A1Q8NGJ0 315 aa15.55■□□□□ 0.08
HMGA2-203ENST00000393578 PAX4O43316 350 aa15.54■□□□□ 0.08
HMGA2-203ENST00000393578 ATP5G1P05496 136 aa15.54■□□□□ 0.08
HMGA2-203ENST00000393578 ATP6V0E2Q8NHE4 81 aa15.54■□□□□ 0.08
HMGA2-203ENST00000393578 CDC42SE2Q9NRR3 84 aa15.54■□□□□ 0.08
HMGA2-203ENST00000393578 TMEM101Q96IK0 257 aa15.53■□□□□ 0.08
HMGA2-203ENST00000393578 ORAOV1Q8WV07 137 aa15.53■□□□□ 0.08
HMGA2-203ENST00000393578 J3QQQ9 107 aa15.52■□□□□ 0.07
HMGA2-203ENST00000393578 LEPROTO15243 131 aa15.52■□□□□ 0.07
HMGA2-203ENST00000393578 ZNF25P17030 456 aaPredicted RBP15.52■□□□□ 0.07
HMGA2-203ENST00000393578 SAMD5Q5TGI4 173 aa15.52■□□□□ 0.07
HMGA2-203ENST00000393578 TEX48A0A1B0GUV7 120 aa15.51■□□□□ 0.07
HMGA2-203ENST00000393578 TSPEAR-AS2P59090 65 aa15.51■□□□□ 0.07
HMGA2-203ENST00000393578 GEMIN7Q9H840 131 aaKnown RBP15.51■□□□□ 0.07
HMGA2-203ENST00000393578 TIRAPP58753 221 aa15.51■□□□□ 0.07
HMGA2-203ENST00000393578 LURAP1LQ8IV03 231 aa15.51■□□□□ 0.07
HMGA2-203ENST00000393578 TAL2Q16559 108 aa15.5■□□□□ 0.07
HMGA2-203ENST00000393578 VSIG2Q96IQ7 327 aa15.5■□□□□ 0.07
HMGA2-203ENST00000393578 LGALS3P17931 250 aaKnown RBP15.49■□□□□ 0.07
HMGA2-203ENST00000393578 FAM19A3Q7Z5A8 133 aa15.49■□□□□ 0.07
HMGA2-203ENST00000393578 PLEKHB2Q96CS7 222 aa15.49■□□□□ 0.07
HMGA2-203ENST00000393578 LINC00469Q8N7U9 141 aa15.49■□□□□ 0.07
HMGA2-203ENST00000393578 CHCHD5Q9BSY4 110 aa15.49■□□□□ 0.07
HMGA2-203ENST00000393578 IGLV5-45A0A087WSX0 123 aa15.48■□□□□ 0.07
HMGA2-203ENST00000393578 A6NDN8 102 aa15.48■□□□□ 0.07
HMGA2-203ENST00000393578 GAGE6Q13070 117 aa15.48■□□□□ 0.07
HMGA2-203ENST00000393578 SCGB1D4Q6XE38 83 aa15.48■□□□□ 0.07
HMGA2-203ENST00000393578 RETNQ9HD89 108 aa15.47■□□□□ 0.07
HMGA2-203ENST00000393578 A0A0J9YY99 117 aa15.47■□□□□ 0.07
HMGA2-203ENST00000393578 GCSHP23434 173 aa15.47■□□□□ 0.07
HMGA2-203ENST00000393578 HERVK_113P63121 156 aa15.47■□□□□ 0.07
HMGA2-203ENST00000393578 TM2D2Q9BX73 214 aa15.47■□□□□ 0.07
HMGA2-203ENST00000393578 IGHV3-64A0A075B6Q5 118 aa15.46■□□□□ 0.07
HMGA2-203ENST00000393578 F5H768 121 aa15.46■□□□□ 0.07
HMGA2-203ENST00000393578 LINC00242Q5T6M2 205 aa15.46■□□□□ 0.07
HMGA2-203ENST00000393578 CEND1Q8N111 149 aa15.46■□□□□ 0.07
HMGA2-203ENST00000393578 HIST1H4GQ99525 98 aa15.46■□□□□ 0.07
HMGA2-203ENST00000393578 DNAH3Q8TD57 4116 aa15.46■□□□□ 0.07
HMGA2-203ENST00000393578 TRAV26-1A0A087WT03 109 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 IGHV1-58A0A0C4DH39 117 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 IGHV3-30-3P0DP02 117 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 COX11Q9Y6N1 276 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 H3BRM9 83 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 TAX1BP3O14907 124 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 CDKN2A-AS1Q9UH64 79 aa15.45■□□□□ 0.06
HMGA2-203ENST00000393578 TRAV13-1A0A0B4J241 112 aa15.44■□□□□ 0.06
HMGA2-203ENST00000393578 ANK2Q01484 3957 aa15.44■□□□□ 0.06
HMGA2-203ENST00000393578 TRAV8-3A0A0A6YYJ7 113 aa15.43■□□□□ 0.06
HMGA2-203ENST00000393578 FXYD2P54710 66 aa15.43■□□□□ 0.06
HMGA2-203ENST00000393578 COX6A2Q02221 97 aa15.43■□□□□ 0.06
HMGA2-203ENST00000393578 C11orf68Q9H3H3 251 aaKnown RBP15.43■□□□□ 0.06
HMGA2-203ENST00000393578 A0A096LPF7 62 aa15.42■□□□□ 0.06
HMGA2-203ENST00000393578 HTN3P15516 51 aa15.42■□□□□ 0.06
HMGA2-203ENST00000393578 SPINK8P0C7L1 97 aa15.42■□□□□ 0.06
HMGA2-203ENST00000393578 C12orf74Q32Q52 190 aa15.42■□□□□ 0.06
HMGA2-203ENST00000393578 Q6ZVH6 145 aa15.42■□□□□ 0.06
HMGA2-203ENST00000393578 IGLV4-60A0A075B6I1 120 aa15.41■□□□□ 0.06
HMGA2-203ENST00000393578 PTTG1IPP53801 180 aa15.41■□□□□ 0.06
HMGA2-203ENST00000393578 MRPL23Q16540 153 aaKnown RBP15.4■□□□□ 0.06
HMGA2-203ENST00000393578 A0A1B0GUV1 79 aa15.39■□□□□ 0.05
HMGA2-203ENST00000393578 K7EP13 123 aa15.39■□□□□ 0.05
HMGA2-203ENST00000393578 SH2D6Q7Z4S9 175 aa15.39■□□□□ 0.05
HMGA2-203ENST00000393578 SPANXB1Q9NS25 103 aaPredicted RBP15.38■□□□□ 0.05
HMGA2-203ENST00000393578 SRSF9Q13242 221 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGA2-203ENST00000393578 ICOSQ9Y6W8 199 aa15.38■□□□□ 0.05
HMGA2-203ENST00000393578 NOTCH1P46531 2555 aa15.38■□□□□ 0.05
HMGA2-203ENST00000393578 TMEM262E9PQX1 116 aa15.37■□□□□ 0.05
HMGA2-203ENST00000393578 IGLV5-39A0A0G2JS06 123 aa15.36■□□□□ 0.05
HMGA2-203ENST00000393578 SMIM13P0DJ93 91 aa15.36■□□□□ 0.05
HMGA2-203ENST00000393578 RBX1P62877 108 aa15.35■□□□□ 0.05
HMGA2-203ENST00000393578 C10orf126Q8N4M7 172 aa15.35■□□□□ 0.05
HMGA2-203ENST00000393578 NDUFA12Q9UI09 145 aa15.35■□□□□ 0.05
HMGA2-203ENST00000393578 ZFAND6Q6FIF0 208 aa15.35■□□□□ 0.05
HMGA2-203ENST00000393578 MDFIQ99750 246 aa15.35■□□□□ 0.05
HMGA2-203ENST00000393578 NHP2Q9NX24 153 aaKnown RBP15.34■□□□□ 0.05
HMGA2-203ENST00000393578 SMIM1B2RUZ4 78 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms