RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GNB1LQ9BYB4 327 aa12.55□□□□□ -0.4
PDLIM7-204ENST00000393546 MAP1LC3AQ9H492 121 aa12.55□□□□□ -0.4
PDLIM7-204ENST00000393546 IGKV3OR2-268A0A0C4DH90 116 aa12.54□□□□□ -0.4
PDLIM7-204ENST00000393546 LOC389332A0A1B0GUA5 103 aa12.54□□□□□ -0.4
PDLIM7-204ENST00000393546 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
PDLIM7-204ENST00000393546 RAB5AP20339 215 aa12.54□□□□□ -0.4
PDLIM7-204ENST00000393546 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
PDLIM7-204ENST00000393546 IGLV5-52A0A0A0MRZ9 124 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 KIAA1644Q3SXP7 199 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 C14orf177Q52M58 125 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 SLC7A5P1Q8MH63 180 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 ZNF664Q8N3J9 261 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 CSDC2Q9Y534 153 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 DNAH5Q8TE73 4624 aa12.52□□□□□ -0.41
PDLIM7-204ENST00000393546 UBE2D4Q9Y2X8 147 aa12.51□□□□□ -0.41
PDLIM7-204ENST00000393546 MT-ND6P03923 174 aa12.5□□□□□ -0.41
PDLIM7-204ENST00000393546 GCSHP23434 173 aa12.5□□□□□ -0.41
PDLIM7-204ENST00000393546 Q8N8P6 123 aa12.5□□□□□ -0.41
PDLIM7-204ENST00000393546 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
PDLIM7-204ENST00000393546 LRP1BQ9NZR2 4599 aa12.49□□□□□ -0.41
PDLIM7-204ENST00000393546 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-204ENST00000393546 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
PDLIM7-204ENST00000393546 TGIF2-C20orf24A0A0A6YYL0 155 aa12.48□□□□□ -0.41
PDLIM7-204ENST00000393546 RPL39P62891 51 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-204ENST00000393546 FABP9Q0Z7S8 132 aa12.48□□□□□ -0.41
PDLIM7-204ENST00000393546 MRPL18Q9H0U6 180 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-204ENST00000393546 LINC00959A0A1B0GUT2 108 aa12.47□□□□□ -0.41
PDLIM7-204ENST00000393546 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
PDLIM7-204ENST00000393546 SS18Q15532 418 aa12.47□□□□□ -0.41
PDLIM7-204ENST00000393546 CHCHD10Q8WYQ3 142 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-204ENST00000393546 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-204ENST00000393546 K7EMI3 77 aa12.46□□□□□ -0.41
PDLIM7-204ENST00000393546 SPANXA1Q9NS26 97 aa12.46□□□□□ -0.41
PDLIM7-204ENST00000393546 IFI27P40305 119 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-204ENST00000393546 ORMDL2Q53FV1 153 aa12.45□□□□□ -0.42
PDLIM7-204ENST00000393546 ALKBH7Q9BT30 221 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-204ENST00000393546 KIAA1109Q2LD37 5005 aa12.44□□□□□ -0.42
PDLIM7-204ENST00000393546 CDK2AP2O75956 126 aa12.44□□□□□ -0.42
PDLIM7-204ENST00000393546 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
PDLIM7-204ENST00000393546 TRAPPC1Q9Y5R8 145 aa12.44□□□□□ -0.42
PDLIM7-204ENST00000393546 CCL25O15444 150 aa12.43□□□□□ -0.42
PDLIM7-204ENST00000393546 XCL1P47992 114 aa12.43□□□□□ -0.42
PDLIM7-204ENST00000393546 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-204ENST00000393546 CFAP161Q6P656 301 aa12.43□□□□□ -0.42
PDLIM7-204ENST00000393546 Q6ZUT4 128 aa12.43□□□□□ -0.42
PDLIM7-204ENST00000393546 PRSS3P2Q8NHM4 247 aa12.43□□□□□ -0.42
PDLIM7-204ENST00000393546 C1orf196B1AJZ1 125 aa12.42□□□□□ -0.42
PDLIM7-204ENST00000393546 PRSS1P07477 247 aa12.42□□□□□ -0.42
PDLIM7-204ENST00000393546 G0S2P27469 103 aa12.42□□□□□ -0.42
PDLIM7-204ENST00000393546 MRPS36P82909 103 aaKnown RBP12.42□□□□□ -0.42
PDLIM7-204ENST00000393546 CYSLTR1Q9Y271 337 aa12.42□□□□□ -0.42
PDLIM7-204ENST00000393546 PYGO1Q9Y3Y4 419 aa12.42□□□□□ -0.42
PDLIM7-204ENST00000393546 FOXI1Q12951 378 aa12.41□□□□□ -0.42
PDLIM7-204ENST00000393546 SMCO4Q9NRQ5 59 aa12.41□□□□□ -0.42
PDLIM7-204ENST00000393546 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
PDLIM7-204ENST00000393546 CD164L2Q6UWJ8 174 aa12.4□□□□□ -0.42
PDLIM7-204ENST00000393546 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
PDLIM7-204ENST00000393546 OPRPNQ99935 248 aaPredicted RBP12.4□□□□□ -0.42
PDLIM7-204ENST00000393546 hDV102S1A0JD36 115 aa12.39□□□□□ -0.43
PDLIM7-204ENST00000393546 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
PDLIM7-204ENST00000393546 FAM104AQ969W3 186 aa12.38□□□□□ -0.43
PDLIM7-204ENST00000393546 AP5S1Q9NUS5 200 aa12.38□□□□□ -0.43
PDLIM7-204ENST00000393546 RYR1P21817 5038 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 IGLV4-3A0A075B6K6 122 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 CBLN2Q8IUK8 224 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 C15orf56Q8N910 161 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
PDLIM7-204ENST00000393546 APOBP04114 4563 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-204ENST00000393546 LINC01546A6NGU7 62 aa12.35□□□□□ -0.43
PDLIM7-204ENST00000393546 LINC01620Q4KN68 170 aa12.35□□□□□ -0.43
PDLIM7-204ENST00000393546 HERC2O95714 4834 aa12.34□□□□□ -0.43
PDLIM7-204ENST00000393546 IGHV1-58A0A0C4DH39 117 aa12.34□□□□□ -0.43
PDLIM7-204ENST00000393546 NPSP0C0P6 89 aa12.34□□□□□ -0.43
PDLIM7-204ENST00000393546 Q6ZN92 141 aa12.34□□□□□ -0.43
PDLIM7-204ENST00000393546 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
PDLIM7-204ENST00000393546 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 IGIPA6NJ69 53 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 COX7A2LO14548 114 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 MALP21145 153 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 XGP55808 180 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 CNBPP62633 177 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 C9orf163Q8N9P6 203 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 VCX2Q9H322 139 aa12.33□□□□□ -0.44
PDLIM7-204ENST00000393546 GVQW2A0A096LPI5 108 aaPredicted RBP12.32□□□□□ -0.44
PDLIM7-204ENST00000393546 PAPPA-AS1Q5QFB9 102 aa12.32□□□□□ -0.44
PDLIM7-204ENST00000393546 C18orf32Q8TCD1 76 aa12.32□□□□□ -0.44
PDLIM7-204ENST00000393546 C2orf88Q9BSF0 95 aa12.32□□□□□ -0.44
PDLIM7-204ENST00000393546 DNAH8Q96JB1 4490 aa12.32□□□□□ -0.44
PDLIM7-204ENST00000393546 C5orf38Q86SI9 138 aa12.31□□□□□ -0.44
PDLIM7-204ENST00000393546 SCGB3A1Q96QR1 104 aa12.31□□□□□ -0.44
PDLIM7-204ENST00000393546 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
PDLIM7-204ENST00000393546 FAM30AQ9NZY2 134 aa12.31□□□□□ -0.44
PDLIM7-204ENST00000393546 HSPG2P98160 4391 aa12.31□□□□□ -0.44
PDLIM7-204ENST00000393546 SLPIP03973 132 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms