RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CYSLTR1Q9Y271 337 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 MIAQ16674 131 aa8.9□□□□□ -0.98
USP44-202ENST00000393091 ENHOQ6UWT2 76 aa8.9□□□□□ -0.98
USP44-202ENST00000393091 FA2HQ7L5A8 372 aa8.9□□□□□ -0.98
USP44-202ENST00000393091 ZNF664Q8N3J9 261 aa8.9□□□□□ -0.98
USP44-202ENST00000393091 FAT2Q9NYQ8 4349 aa8.9□□□□□ -0.98
USP44-202ENST00000393091 COX11Q9Y6N1 276 aa8.9□□□□□ -0.98
USP44-202ENST00000393091 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
USP44-202ENST00000393091 C2orf66Q6UXQ4 117 aa8.89□□□□□ -0.99
USP44-202ENST00000393091 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
USP44-202ENST00000393091 ERASQ7Z444 233 aa8.89□□□□□ -0.99
USP44-202ENST00000393091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
USP44-202ENST00000393091 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
USP44-202ENST00000393091 GAGE6Q13070 117 aa8.89□□□□□ -0.99
USP44-202ENST00000393091 TMEM101Q96IK0 257 aa8.89□□□□□ -0.99
USP44-202ENST00000393091 A0A087WX48 190 aa8.88□□□□□ -0.99
USP44-202ENST00000393091 C6orf223Q8N319 242 aa8.88□□□□□ -0.99
USP44-202ENST00000393091 HBDP02042 147 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 RMI2Q96E14 147 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 C1orf196B1AJZ1 125 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 PAPPA-AS1Q5QFB9 102 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 LINC00173Q6ZV60 143 aa8.87□□□□□ -0.99
USP44-202ENST00000393091 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
USP44-202ENST00000393091 Q8N3U1 123 aa8.86□□□□□ -0.99
USP44-202ENST00000393091 LINC00336Q6ZUF6 198 aa8.86□□□□□ -0.99
USP44-202ENST00000393091 REG3AQ06141 175 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 TM2D2Q9BX73 214 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 IGHV3-30P01768 117 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 IGHV3-33P01772 117 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 IGHV3-30-3P0DP02 117 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 IGHV3-30-5P0DP03 117 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 AMMECR1LQ6DCA0 310 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 PKD1P98161 4303 aa8.85□□□□□ -0.99
USP44-202ENST00000393091 TMEM262E9PQX1 116 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 SERF1AO75920 110 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 C1orf134Q5TEV5 83 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 Q8N976 141 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 TRAV12-1A0A0B4J245 112 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 ATP5LO75964 103 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 RYR3Q15413 4870 aa8.84□□□□□ -0.99
USP44-202ENST00000393091 LINC00959A0A1B0GUT2 108 aa8.83□□□□□ -1
USP44-202ENST00000393091 RTL8CO15255 209 aa8.83□□□□□ -1
USP44-202ENST00000393091 BAGE3Q86Y29 109 aa8.83□□□□□ -1
USP44-202ENST00000393091 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
USP44-202ENST00000393091 ANGP03950 147 aaKnown RBP8.83□□□□□ -1
USP44-202ENST00000393091 Q6ZUT4 128 aa8.83□□□□□ -1
USP44-202ENST00000393091 KLK12Q9UKR0 248 aa8.83□□□□□ -1
USP44-202ENST00000393091 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
USP44-202ENST00000393091 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
USP44-202ENST00000393091 UBE2D1P51668 147 aa8.82□□□□□ -1
USP44-202ENST00000393091 RNASEKQ6P5S7 137 aaKnown RBP8.82□□□□□ -1
USP44-202ENST00000393091 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
USP44-202ENST00000393091 SCGB3A1Q96QR1 104 aa8.81□□□□□ -1
USP44-202ENST00000393091 NUPR1O60356 82 aa8.81□□□□□ -1
USP44-202ENST00000393091 FOXI1Q12951 378 aa8.81□□□□□ -1
USP44-202ENST00000393091 SPATA12Q7Z6I5 190 aa8.81□□□□□ -1
USP44-202ENST00000393091 BAALCQ8WXS3 180 aa8.81□□□□□ -1
USP44-202ENST00000393091 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.8□□□□□ -1
USP44-202ENST00000393091 CRPP02741 224 aa8.8□□□□□ -1
USP44-202ENST00000393091 CD164L2Q6UWJ8 174 aa8.8□□□□□ -1
USP44-202ENST00000393091 TEX43Q6ZNM6 134 aa8.8□□□□□ -1
USP44-202ENST00000393091 CST9LQ9H4G1 147 aa8.8□□□□□ -1
USP44-202ENST00000393091 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
USP44-202ENST00000393091 F8WDY8 70 aa8.79□□□□□ -1
USP44-202ENST00000393091 SEC11AP67812 179 aa8.79□□□□□ -1
USP44-202ENST00000393091 A0A1B0GVY2 172 aa8.79□□□□□ -1
USP44-202ENST00000393091 HSBP1O75506 76 aa8.79□□□□□ -1
USP44-202ENST00000393091 IGLC3P0DOY3 106 aa8.79□□□□□ -1
USP44-202ENST00000393091 PMVKQ15126 192 aa8.79□□□□□ -1
USP44-202ENST00000393091 SS18Q15532 418 aa8.79□□□□□ -1
USP44-202ENST00000393091 DGAT2L7PQ6IED9 249 aa8.79□□□□□ -1
USP44-202ENST00000393091 C2orf88Q9BSF0 95 aa8.79□□□□□ -1
USP44-202ENST00000393091 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
USP44-202ENST00000393091 Q6ZN92 141 aa8.79□□□□□ -1
USP44-202ENST00000393091 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
USP44-202ENST00000393091 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
USP44-202ENST00000393091 UBE2WQ96B02 151 aa8.78□□□□□ -1
USP44-202ENST00000393091 IGHV3OR16-9A0A0B4J2B5 98 aa8.77□□□□□ -1
USP44-202ENST00000393091 C1orf43Q9BWL3 253 aa8.77□□□□□ -1
USP44-202ENST00000393091 VCX2Q9H322 139 aa8.77□□□□□ -1
USP44-202ENST00000393091 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
USP44-202ENST00000393091 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
USP44-202ENST00000393091 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1.01
USP44-202ENST00000393091 C5orf52A6NGY3 159 aa8.76□□□□□ -1.01
USP44-202ENST00000393091 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
USP44-202ENST00000393091 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
USP44-202ENST00000393091 IGLV4-69A0A075B6H9 119 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 A0A087WZ39 114 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 LEPROTL1O95214 131 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 HERVK_113P63121 156 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 NTN5Q8WTR8 489 aaPredicted RBP8.75□□□□□ -1.01
USP44-202ENST00000393091 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
USP44-202ENST00000393091 IFITM10A6NMD0 228 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 M0R2N4 97 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 PMCHL1Q16048 86 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
USP44-202ENST00000393091 A0A087WTM6 91 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms