RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 CDC42SE2Q9NRR3 84 aa16.97■□□□□ 0.31
HOMER3-202ENST00000392351 SPANXA1Q9NS26 97 aa16.97■□□□□ 0.31
HOMER3-202ENST00000392351 IGKV3OR2-268A0A0C4DH90 116 aa16.96■□□□□ 0.31
HOMER3-202ENST00000392351 ZNF664Q8N3J9 261 aa16.96■□□□□ 0.31
HOMER3-202ENST00000392351 URB1-AS1Q96HZ7 61 aa16.96■□□□□ 0.31
HOMER3-202ENST00000392351 AP5S1Q9NUS5 200 aa16.96■□□□□ 0.31
HOMER3-202ENST00000392351 PSCAO43653 123 aa16.95■□□□□ 0.3
HOMER3-202ENST00000392351 LINC00336Q6ZUF6 198 aa16.95■□□□□ 0.3
HOMER3-202ENST00000392351 C1orf43Q9BWL3 253 aa16.95■□□□□ 0.3
HOMER3-202ENST00000392351 TM2D2Q9BX73 214 aa16.95■□□□□ 0.3
HOMER3-202ENST00000392351 LINC00614P0C842 121 aa16.94■□□□□ 0.3
HOMER3-202ENST00000392351 Q6ZUT4 128 aa16.94■□□□□ 0.3
HOMER3-202ENST00000392351 PRSS29PA6NIE9 313 aa16.94■□□□□ 0.3
HOMER3-202ENST00000392351 G0S2P27469 103 aa16.94■□□□□ 0.3
HOMER3-202ENST00000392351 RAB5BP61020 215 aa16.94■□□□□ 0.3
HOMER3-202ENST00000392351 RNASE13Q5GAN3 156 aaKnown RBP16.94■□□□□ 0.3
HOMER3-202ENST00000392351 DNAH17Q9UFH2 4485 aa16.93■□□□□ 0.3
HOMER3-202ENST00000392351 IGLV10-54A0A075B6I4 117 aa16.93■□□□□ 0.3
HOMER3-202ENST00000392351 COX11Q9Y6N1 276 aa16.93■□□□□ 0.3
HOMER3-202ENST00000392351 TNP2Q05952 138 aa16.92■□□□□ 0.3
HOMER3-202ENST00000392351 OPRPNQ99935 248 aaPredicted RBP16.92■□□□□ 0.3
HOMER3-202ENST00000392351 PYGO1Q9Y3Y4 419 aa16.92■□□□□ 0.3
HOMER3-202ENST00000392351 TOMM6Q96B49 74 aa16.91■□□□□ 0.3
HOMER3-202ENST00000392351 FAT2Q9NYQ8 4349 aa16.91■□□□□ 0.3
HOMER3-202ENST00000392351 TRAV8-4A0A0B4J246 113 aa16.9■□□□□ 0.3
HOMER3-202ENST00000392351 FAM104AQ969W3 186 aa16.9■□□□□ 0.3
HOMER3-202ENST00000392351 MRPS36P82909 103 aaKnown RBP16.89■□□□□ 0.3
HOMER3-202ENST00000392351 BAGE3Q86Y29 109 aa16.89■□□□□ 0.3
HOMER3-202ENST00000392351 IGLV4-3A0A075B6K6 122 aa16.87■□□□□ 0.29
HOMER3-202ENST00000392351 PMCHL1Q16048 86 aa16.87■□□□□ 0.29
HOMER3-202ENST00000392351 CHCHD1Q96BP2 118 aaKnown RBP16.87■□□□□ 0.29
HOMER3-202ENST00000392351 LINC00959A0A1B0GUT2 108 aa16.86■□□□□ 0.29
HOMER3-202ENST00000392351 IGIPA6NJ69 53 aa16.86■□□□□ 0.29
HOMER3-202ENST00000392351 MAPKAPK5-AS1Q8N8E1 139 aa16.86■□□□□ 0.29
HOMER3-202ENST00000392351 TMEM141Q96I45 108 aa16.86■□□□□ 0.29
HOMER3-202ENST00000392351 LINC01549A6NIU2 74 aa16.85■□□□□ 0.29
HOMER3-202ENST00000392351 SCGB3A1Q96QR1 104 aa16.85■□□□□ 0.29
HOMER3-202ENST00000392351 A0A096LNJ9 63 aa16.85■□□□□ 0.29
HOMER3-202ENST00000392351 KRTAP26-1Q6PEX3 210 aa16.85■□□□□ 0.29
HOMER3-202ENST00000392351 CHCHD10Q8WYQ3 142 aaPredicted RBP16.85■□□□□ 0.29
HOMER3-202ENST00000392351 TIMM17AQ99595 171 aa16.85■□□□□ 0.29
HOMER3-202ENST00000392351 TRAV13-1A0A0B4J241 112 aa16.84■□□□□ 0.29
HOMER3-202ENST00000392351 HBDP02042 147 aa16.84■□□□□ 0.29
HOMER3-202ENST00000392351 ERASQ7Z444 233 aa16.84■□□□□ 0.29
HOMER3-202ENST00000392351 HIST1H2BKO60814 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BJP06899 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 NPSP0C0P6 89 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BOP23527 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BBP33778 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BDP58876 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BCP62807 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 SS18Q15532 418 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST2H2BEQ16778 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.83■□□□□ 0.28
HOMER3-202ENST00000392351 Q6ZN92 141 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BHQ93079 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BNQ99877 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 HIST1H2BMQ99879 126 aa16.83■□□□□ 0.28
HOMER3-202ENST00000392351 A0A087WTM6 91 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 LRCOL1A6NCL2 159 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 IFITM10A6NMD0 228 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 CCL25O15444 150 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 SERF1AO75920 110 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 XCL1P47992 114 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 TEX43Q6ZNM6 134 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 BAALCQ8WXS3 180 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 C1orf196B1AJZ1 125 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 HSBP1O75506 76 aa16.81■□□□□ 0.28
HOMER3-202ENST00000392351 GAGE12HA6NDE8 117 aa16.8■□□□□ 0.28
HOMER3-202ENST00000392351 LECT2O14960 151 aa16.8■□□□□ 0.28
HOMER3-202ENST00000392351 LINC00310P59036 64 aa16.8■□□□□ 0.28
HOMER3-202ENST00000392351 PAPPA-AS1Q5QFB9 102 aa16.8■□□□□ 0.28
HOMER3-202ENST00000392351 VCX2Q9H322 139 aa16.8■□□□□ 0.28
HOMER3-202ENST00000392351 WFDC2Q14508 124 aa16.79■□□□□ 0.28
HOMER3-202ENST00000392351 ZC2HC1BQ5TFG8 222 aa16.79■□□□□ 0.28
HOMER3-202ENST00000392351 PKD1P98161 4303 aa16.78■□□□□ 0.28
HOMER3-202ENST00000392351 EREGO14944 169 aa16.78■□□□□ 0.28
HOMER3-202ENST00000392351 LINC00173Q6ZV60 143 aa16.78■□□□□ 0.28
HOMER3-202ENST00000392351 AMELXQ99217 191 aa16.78■□□□□ 0.28
HOMER3-202ENST00000392351 C2orf88Q9BSF0 95 aa16.78■□□□□ 0.28
HOMER3-202ENST00000392351 EPPK1P58107 5090 aaKnown RBP16.78■□□□□ 0.28
HOMER3-202ENST00000392351 A0A1B0GVY2 172 aa16.77■□□□□ 0.27
HOMER3-202ENST00000392351 PDZD11Q5EBL8 140 aa16.77■□□□□ 0.27
HOMER3-202ENST00000392351 FAM19A2Q8N3H0 131 aa16.77■□□□□ 0.27
HOMER3-202ENST00000392351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.76■□□□□ 0.27
HOMER3-202ENST00000392351 FOXI1Q12951 378 aa16.76■□□□□ 0.27
HOMER3-202ENST00000392351 HECTD4Q9Y4D8 3996 aa16.75■□□□□ 0.27
HOMER3-202ENST00000392351 CD164L2Q6UWJ8 174 aa16.75■□□□□ 0.27
HOMER3-202ENST00000392351 NUPR1O60356 82 aa16.74■□□□□ 0.27
HOMER3-202ENST00000392351 USP17L23D6RBM5 183 aa16.73■□□□□ 0.27
HOMER3-202ENST00000392351 UBE2D1P51668 147 aa16.72■□□□□ 0.27
HOMER3-202ENST00000392351 Q8N814 137 aa16.72■□□□□ 0.27
HOMER3-202ENST00000392351 DNAH11Q96DT5 4516 aa16.72■□□□□ 0.27
HOMER3-202ENST00000392351 ATP5LO75964 103 aa16.71■□□□□ 0.27
HOMER3-202ENST00000392351 LINC00242Q5T6M2 205 aa16.7■□□□□ 0.26
HOMER3-202ENST00000392351 SPATA12Q7Z6I5 190 aa16.7■□□□□ 0.26
HOMER3-202ENST00000392351 KRTAP10-2P60368 255 aa16.68■□□□□ 0.26
HOMER3-202ENST00000392351 PMVKQ15126 192 aa16.68■□□□□ 0.26
HOMER3-202ENST00000392351 CST9LQ9H4G1 147 aa16.68■□□□□ 0.26
HOMER3-202ENST00000392351 COX7A2LO14548 114 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms