RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 BOD1L2Q8IYS8 172 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 AMELXQ99217 191 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 DEFB4AO15263 64 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 NMUP48645 174 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 NTM-AS1Q6ZSK4 140 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 TIMM21Q9BVV7 248 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 VCX2Q9H322 139 aa8.07□□□□□ -1.12
SMARCAL1-203ENST00000392128 NBEAL2Q6ZNJ1 2754 aa8.06□□□□□ -1.12
SMARCAL1-203ENST00000392128 IGKV2D-26A0A0A0MRZ7 120 aa8.06□□□□□ -1.12
SMARCAL1-203ENST00000392128 TCTAP57738 103 aa8.06□□□□□ -1.12
SMARCAL1-203ENST00000392128 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
SMARCAL1-203ENST00000392128 DNAH3Q8TD57 4116 aa8.06□□□□□ -1.12
SMARCAL1-203ENST00000392128 C11orf86A6NJI1 115 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 SBSPONQ8IVN8 264 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 ANK2Q01484 3957 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 SPART-AS1P0CW21 52 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 DAD1P61803 113 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 VAMP3Q15836 100 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 CEMP1Q6PRD7 247 aaPredicted RBP8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 PCP2Q8IVA1 136 aa8.05□□□□□ -1.12
SMARCAL1-203ENST00000392128 CELA1Q9UNI1 258 aa8.04□□□□□ -1.12
SMARCAL1-203ENST00000392128 C2orf91Q6ZV80 131 aa8.04□□□□□ -1.12
SMARCAL1-203ENST00000392128 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-203ENST00000392128 TEX48A0A1B0GUV7 120 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 SIVA1O15304 175 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 TMEM97Q5BJF2 176 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 E9PLD3 99 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 H7C423 109 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 GYPEP15421 78 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 Q6ZUT4 128 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 TMEM243Q9BU79 118 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
SMARCAL1-203ENST00000392128 TRBV25-1A0A075B6N4 114 aa8.02□□□□□ -1.13
SMARCAL1-203ENST00000392128 ATP5G1P05496 136 aa8.02□□□□□ -1.13
SMARCAL1-203ENST00000392128 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
SMARCAL1-203ENST00000392128 HERVK_113P61574 105 aa8.02□□□□□ -1.13
SMARCAL1-203ENST00000392128 DGAT2L7PQ6IED9 249 aa8.02□□□□□ -1.13
SMARCAL1-203ENST00000392128 TRBV6-8A0A0A6YYG3 113 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 A0A0J9YXV3 536 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 PAX4O43316 350 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 RETNQ9HD89 108 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 UBE2L6O14933 153 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 RNASE13Q5GAN3 156 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 TMEM170BQ5T4T1 132 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 ATP6V0E2Q8NHE4 81 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 TTTY13Q9BZ97 58 aa8.01□□□□□ -1.13
SMARCAL1-203ENST00000392128 TRAV8-6A0A0B4J262 113 aa8□□□□□ -1.13
SMARCAL1-203ENST00000392128 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
SMARCAL1-203ENST00000392128 VSIG2Q96IQ7 327 aa8□□□□□ -1.13
SMARCAL1-203ENST00000392128 C11orf68Q9H3H3 251 aaKnown RBP8□□□□□ -1.13
SMARCAL1-203ENST00000392128 TINCRA0A1B0GVN0 87 aa8□□□□□ -1.13
SMARCAL1-203ENST00000392128 MDFIQ99750 246 aa8□□□□□ -1.13
SMARCAL1-203ENST00000392128 HIGD1BQ9P298 99 aa8□□□□□ -1.13
SMARCAL1-203ENST00000392128 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 UBE2D1P51668 147 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 MPV17L2Q567V2 206 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 MAPKAPK5-AS1Q8N8E1 139 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 GEMIN7Q9H840 131 aaKnown RBP7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 KPRPQ5T749 579 aaPredicted RBP7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 AMMECR1LQ6DCA0 310 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 Q6ZVH6 145 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 CDC42SE2Q9NRR3 84 aa7.99□□□□□ -1.13
SMARCAL1-203ENST00000392128 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
SMARCAL1-203ENST00000392128 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
SMARCAL1-203ENST00000392128 F5H768 121 aa7.98□□□□□ -1.13
SMARCAL1-203ENST00000392128 C12orf74Q32Q52 190 aa7.98□□□□□ -1.13
SMARCAL1-203ENST00000392128 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
SMARCAL1-203ENST00000392128 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
SMARCAL1-203ENST00000392128 A0A0J9YY99 117 aa7.97□□□□□ -1.13
SMARCAL1-203ENST00000392128 TIRAPP58753 221 aa7.97□□□□□ -1.13
SMARCAL1-203ENST00000392128 HSD52Q0P140 79 aa7.97□□□□□ -1.13
SMARCAL1-203ENST00000392128 CHCHD5Q9BSY4 110 aa7.97□□□□□ -1.13
SMARCAL1-203ENST00000392128 GAGE6Q13070 117 aa7.96□□□□□ -1.14
SMARCAL1-203ENST00000392128 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 K7EIL1 84 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 LEPROTO15243 131 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 SEC11AP67812 179 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 SS18L2Q9UHA2 77 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 HTN3P15516 51 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
SMARCAL1-203ENST00000392128 J3QQQ9 107 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 TAX1BP3O14907 124 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 PRB2P02812 416 aaPredicted RBP7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 TSPEAR-AS2P59090 65 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 HERVK_113P63121 156 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 MRPL23Q16540 153 aaKnown RBP7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 LINC00242Q5T6M2 205 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 A0A096LPF7 62 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 C5orf47Q569G3 176 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 SPATA25Q9BR10 227 aa7.94□□□□□ -1.14
SMARCAL1-203ENST00000392128 ICOSQ9Y6W8 199 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms