RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 LINC01556Q5JQF7 62 aa11.57□□□□□ -0.56
ERCC2-202ENST00000391942 DGAT2L7PQ6IED9 249 aa11.57□□□□□ -0.56
ERCC2-202ENST00000391942 OPRPNQ99935 248 aaPredicted RBP11.57□□□□□ -0.56
ERCC2-202ENST00000391942 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
ERCC2-202ENST00000391942 G0S2P27469 103 aa11.56□□□□□ -0.56
ERCC2-202ENST00000391942 PDZD11Q5EBL8 140 aa11.56□□□□□ -0.56
ERCC2-202ENST00000391942 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
ERCC2-202ENST00000391942 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
ERCC2-202ENST00000391942 TMEM101Q96IK0 257 aa11.56□□□□□ -0.56
ERCC2-202ENST00000391942 RNASE13Q5GAN3 156 aaKnown RBP11.55□□□□□ -0.56
ERCC2-202ENST00000391942 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
ERCC2-202ENST00000391942 KLK12Q9UKR0 248 aa11.55□□□□□ -0.56
ERCC2-202ENST00000391942 A0A1B0GUV1 79 aa11.54□□□□□ -0.56
ERCC2-202ENST00000391942 ZNF25P17030 456 aaPredicted RBP11.54□□□□□ -0.56
ERCC2-202ENST00000391942 SMAGPQ0VAQ4 97 aa11.54□□□□□ -0.56
ERCC2-202ENST00000391942 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
ERCC2-202ENST00000391942 Q6ZUT4 128 aa11.54□□□□□ -0.56
ERCC2-202ENST00000391942 SPANXA1Q9NS26 97 aa11.54□□□□□ -0.56
ERCC2-202ENST00000391942 TIMM21Q9BVV7 248 aa11.53□□□□□ -0.56
ERCC2-202ENST00000391942 ALMS1Q8TCU4 4167 aa11.53□□□□□ -0.56
ERCC2-202ENST00000391942 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 IGIPA6NJ69 53 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 M0R2N4 97 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 FABP4P15090 132 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 ZNF664Q8N3J9 261 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 FAM104AQ969W3 186 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.56
ERCC2-202ENST00000391942 VPS13DQ5THJ4 4388 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 IGLV4-3A0A075B6K6 122 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 A0A1B0GV90 55 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 ZC2HC1BQ5TFG8 222 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 LINC00173Q6ZV60 143 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 ERASQ7Z444 233 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 CDC42SE2Q9NRR3 84 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
ERCC2-202ENST00000391942 DNAH1Q9P2D7 4330 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 NBDYA0A0U1RRE5 68 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 OR10D4PQ8NGN7 298 aa11.51□□□□□ -0.57
ERCC2-202ENST00000391942 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
ERCC2-202ENST00000391942 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
ERCC2-202ENST00000391942 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
ERCC2-202ENST00000391942 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
ERCC2-202ENST00000391942 LCE6AA0A183 80 aa11.49□□□□□ -0.57
ERCC2-202ENST00000391942 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
ERCC2-202ENST00000391942 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
ERCC2-202ENST00000391942 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
ERCC2-202ENST00000391942 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
ERCC2-202ENST00000391942 REG3AQ06141 175 aa11.49□□□□□ -0.57
ERCC2-202ENST00000391942 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
ERCC2-202ENST00000391942 CRPP02741 224 aa11.48□□□□□ -0.57
ERCC2-202ENST00000391942 ENHOQ6UWT2 76 aa11.48□□□□□ -0.57
ERCC2-202ENST00000391942 Q6ZN92 141 aa11.48□□□□□ -0.57
ERCC2-202ENST00000391942 C10orf126Q8N4M7 172 aa11.48□□□□□ -0.57
ERCC2-202ENST00000391942 Q9HAA7 133 aa11.48□□□□□ -0.57
ERCC2-202ENST00000391942 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
ERCC2-202ENST00000391942 ATP5LO75964 103 aa11.47□□□□□ -0.57
ERCC2-202ENST00000391942 TTC32Q5I0X7 151 aa11.47□□□□□ -0.57
ERCC2-202ENST00000391942 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
ERCC2-202ENST00000391942 VCX2Q9H322 139 aa11.47□□□□□ -0.57
ERCC2-202ENST00000391942 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
ERCC2-202ENST00000391942 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
ERCC2-202ENST00000391942 IGLV10-54A0A075B6I4 117 aa11.45□□□□□ -0.58
ERCC2-202ENST00000391942 TRAV13-1A0A0B4J241 112 aa11.45□□□□□ -0.58
ERCC2-202ENST00000391942 IFITM10A6NMD0 228 aa11.45□□□□□ -0.58
ERCC2-202ENST00000391942 H0Y8G0 127 aa11.45□□□□□ -0.58
ERCC2-202ENST00000391942 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
ERCC2-202ENST00000391942 HSPB8Q9UJY1 196 aa11.45□□□□□ -0.58
ERCC2-202ENST00000391942 K7EP13 123 aa11.44□□□□□ -0.58
ERCC2-202ENST00000391942 PRSS1P07477 247 aa11.44□□□□□ -0.58
ERCC2-202ENST00000391942 NPSP0C0P6 89 aa11.44□□□□□ -0.58
ERCC2-202ENST00000391942 PAPPA-AS1Q5QFB9 102 aa11.44□□□□□ -0.58
ERCC2-202ENST00000391942 PACRGQ96M98 296 aaPredicted RBP11.44□□□□□ -0.58
ERCC2-202ENST00000391942 AMELXQ99217 191 aa11.44□□□□□ -0.58
ERCC2-202ENST00000391942 Q6ZR54 194 aa11.44□□□□□ -0.58
ERCC2-202ENST00000391942 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
ERCC2-202ENST00000391942 PRSS29PA6NIE9 313 aa11.43□□□□□ -0.58
ERCC2-202ENST00000391942 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
ERCC2-202ENST00000391942 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
ERCC2-202ENST00000391942 TRAV8-3A0A0A6YYJ7 113 aa11.42□□□□□ -0.58
ERCC2-202ENST00000391942 M0R143 59 aa11.42□□□□□ -0.58
ERCC2-202ENST00000391942 PMVKQ15126 192 aa11.42□□□□□ -0.58
ERCC2-202ENST00000391942 MIAQ16674 131 aa11.42□□□□□ -0.58
ERCC2-202ENST00000391942 IGKV2D-24A0A075B6R9 120 aa11.41□□□□□ -0.58
ERCC2-202ENST00000391942 SS18Q15532 418 aa11.41□□□□□ -0.58
ERCC2-202ENST00000391942 ANKRD39Q53RE8 183 aa11.41□□□□□ -0.58
ERCC2-202ENST00000391942 KMT2AQ03164 3969 aa11.4□□□□□ -0.58
ERCC2-202ENST00000391942 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
ERCC2-202ENST00000391942 CCL25O15444 150 aa11.39□□□□□ -0.59
ERCC2-202ENST00000391942 XCL1P47992 114 aa11.39□□□□□ -0.59
ERCC2-202ENST00000391942 UBE2D1P51668 147 aa11.39□□□□□ -0.59
ERCC2-202ENST00000391942 KRTDAPP60985 99 aa11.39□□□□□ -0.59
ERCC2-202ENST00000391942 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
ERCC2-202ENST00000391942 C1orf43Q9BWL3 253 aa11.39□□□□□ -0.59
ERCC2-202ENST00000391942 TRAV8-4A0A0B4J246 113 aa11.38□□□□□ -0.59
ERCC2-202ENST00000391942 A0A0J9YXV3 536 aa11.38□□□□□ -0.59
ERCC2-202ENST00000391942 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
ERCC2-202ENST00000391942 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms