RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 NDUFA4L2Q9NRX3 87 aa-2.84□□□□□ -2.86
RNU6-1009P-201ENST00000390996 PCF11O94913 1555 aaKnown RBP-2.84□□□□□ -2.86
RNU6-1009P-201ENST00000390996 SETBP1Q9Y6X0 1596 aa-2.84□□□□□ -2.86
RNU6-1009P-201ENST00000390996 ITPR2Q14571 2701 aa-2.84□□□□□ -2.86
RNU6-1009P-201ENST00000390996 MT1HL1P0DM35 61 aa-2.85□□□□□ -2.87
RNU6-1009P-201ENST00000390996 CCL7P80098 99 aa-2.85□□□□□ -2.87
RNU6-1009P-201ENST00000390996 FAM24BQ8N5W8 94 aa-2.85□□□□□ -2.87
RNU6-1009P-201ENST00000390996 GINS3Q9BRX5 216 aa-2.85□□□□□ -2.87
RNU6-1009P-201ENST00000390996 ARL2BPQ9Y2Y0 163 aa-2.85□□□□□ -2.87
RNU6-1009P-201ENST00000390996 DNAJC15Q9Y5T4 150 aa-2.85□□□□□ -2.87
RNU6-1009P-201ENST00000390996 UBE2G1P62253 170 aa-2.86□□□□□ -2.87
RNU6-1009P-201ENST00000390996 Q6AWC8 147 aa-2.86□□□□□ -2.87
RNU6-1009P-201ENST00000390996 Q8N8P6 123 aa-2.86□□□□□ -2.87
RNU6-1009P-201ENST00000390996 SMG1Q96Q15 3661 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 RPL7P18124 248 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 S100A5P33763 92 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 TPM4P67936 248 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 SPANXN1Q5VSR9 72 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 SPTSSBQ8NFR3 76 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 TRAPPC2LQ9UL33 140 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 V9GYH0 126 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 TLN2Q9Y4G6 2542 aa-2.87□□□□□ -2.87
RNU6-1009P-201ENST00000390996 SHANK2Q9UPX8 1470 aa-2.88□□□□□ -2.87
RNU6-1009P-201ENST00000390996 YPEL1O60688 119 aa-2.88□□□□□ -2.87
RNU6-1009P-201ENST00000390996 BAGE2Q86Y30 109 aa-2.88□□□□□ -2.87
RNU6-1009P-201ENST00000390996 LLPHQ9BRT6 129 aaKnown RBP-2.88□□□□□ -2.87
RNU6-1009P-201ENST00000390996 MED31Q9Y3C7 131 aa-2.88□□□□□ -2.87
RNU6-1009P-201ENST00000390996 MYH3P11055 1940 aa-2.88□□□□□ -2.87
RNU6-1009P-201ENST00000390996 IFNA1P01562 189 aa-2.89□□□□□ -2.87
RNU6-1009P-201ENST00000390996 CLLU1Q5K131 121 aa-2.89□□□□□ -2.87
RNU6-1009P-201ENST00000390996 DCUN1D2Q6PH85 259 aa-2.89□□□□□ -2.87
RNU6-1009P-201ENST00000390996 SCIMPQ6UWF3 145 aa-2.89□□□□□ -2.87
RNU6-1009P-201ENST00000390996 TMED4Q7Z7H5 227 aa-2.89□□□□□ -2.87
RNU6-1009P-201ENST00000390996 ZFHX3Q15911 3703 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 E7EQ34 232 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 UQCR11O14957 56 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 E2F6O75461 281 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 APOC3P02656 99 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 CRIPTQ9P021 101 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 PXDNQ92626 1479 aa-2.9□□□□□ -2.87
RNU6-1009P-201ENST00000390996 KDM5CP41229 1560 aa-2.91□□□□□ -2.87
RNU6-1009P-201ENST00000390996 KRTAP19-5Q3LI72 72 aa-2.91□□□□□ -2.88
RNU6-1009P-201ENST00000390996 KIF21AQ7Z4S6 1674 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 SMIM24O75264 130 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 HLA-DRB4P13762 266 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 TPPP2P59282 170 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 GNG3P63215 75 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CCDC32Q9BV29 185 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 MRPL40Q9NQ50 206 aaKnown RBP-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 HLA-DRB4X5D2U9 266 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 PATJQ8NI35 1801 aa-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.92□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CICQ96RK0 1608 aaPredicted RBP-2.93□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CCL8P80075 99 aa-2.93□□□□□ -2.88
RNU6-1009P-201ENST00000390996 SMIM20Q8N5G0 67 aa-2.93□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CALML5Q9NZT1 146 aa-2.93□□□□□ -2.88
RNU6-1009P-201ENST00000390996 ERCC6Q03468 1493 aa-2.93□□□□□ -2.88
RNU6-1009P-201ENST00000390996 TRRAPQ9Y4A5 3859 aa-2.93□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DMXL2Q8TDJ6 3036 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 NIPSNAP2O75323 286 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 FAM107AO95990 144 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 POLR2HP52434 150 aaKnown RBP-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 HEPN1Q6WQI6 88 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 AKAP14Q86UN6 197 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 PPP1R14BQ96C90 147 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 LSM2Q9Y333 95 aaKnown RBP-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 LENEPQ9Y5L5 61 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DNAH17Q9UFH2 4485 aa-2.94□□□□□ -2.88
RNU6-1009P-201ENST00000390996 I3L3M4 83 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CBLN1P23435 193 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DEFB110Q30KQ9 67 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 C10orf113Q5VZT2 155 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DHRS4L2Q6PKH6 230 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 WFDC13Q8IUB5 93 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 FDCSPQ8NFU4 85 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 TMEM263Q8WUH6 116 aaKnown RBP-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CEP19Q96LK0 163 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CDC42SE2Q9NRR3 84 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 S4R3F8 94 aa-2.95□□□□□ -2.88
RNU6-1009P-201ENST00000390996 NKTRP30414 1462 aaKnown RBP-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 ADCY9O60503 1353 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 TRBV7-3A0A075B6L6 115 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 TCTAP57738 103 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 C10orf128Q5T292 105 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 THEM6Q8WUY1 208 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 BANF2Q9H503 90 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 YTHDC2Q9H6S0 1430 aaKnown RBP-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DNAH5Q8TE73 4624 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 KNDC1Q76NI1 1749 aa-2.96□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CAMSAP1Q5T5Y3 1602 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 ARHGEF10O15013 1369 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 TRAV30A0A087WSZ9 112 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 LELP1Q5T871 98 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 CCDC115Q96NT0 180 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DISP2A7MBM2 1401 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 DAPK1P53355 1430 aa-2.97□□□□□ -2.88
RNU6-1009P-201ENST00000390996 COL14A1Q05707 1796 aaKnown RBP-2.97□□□□□ -2.89
RNU6-1009P-201ENST00000390996 SIX6O95475 246 aa-2.98□□□□□ -2.89
RNU6-1009P-201ENST00000390996 PAEPP09466 180 aa-2.98□□□□□ -2.89
RNU6-1009P-201ENST00000390996 CDKN2CP42773 168 aa-2.98□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms