RNA–Protein interactions for RNA: ENST00000390490.1

TRAJ47-201, Transcript of T cell receptor alpha joining 47, humanhuman

APPRIS P1 BASIC

Gene TRAJ47, Length 57 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ47-201ENST00000390490 SSBP3-AS1Q7Z2R9 100 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 NXT2Q9NPJ8 142 aaKnown RBP0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 FAIMQ9NVQ4 179 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 PRO1854Q9UHT4 67 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 AP4S1Q9Y587 144 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 ARL2-SNX15V9GYD0 113 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 PATJQ8NI35 1801 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 DOCK1Q14185 1865 aa0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 ASH1LQ9NR48 2969 aaKnown RBP0.28□□□□□ -2.36
TRAJ47-201ENST00000390490 ABCC5O15440 1437 aa0.28□□□□□ -2.37
TRAJ47-201ENST00000390490 HMCN1Q96RW7 5635 aa0.28□□□□□ -2.37
TRAJ47-201ENST00000390490 UNC13BO14795 1591 aa0.28□□□□□ -2.37
TRAJ47-201ENST00000390490 CACNA1HO95180 2353 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 TTC28Q96AY4 2481 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 MPC2O95563 127 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 MT-ATP8P03928 68 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 MGPP08493 103 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 LINC00032P0C843 101 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 IGLC1P0CG04 106 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 PI4KAP42356 2102 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 SEC11AP67812 179 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 HAMPP81172 84 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 SFTA2Q6UW10 78 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 FAM223AQ8IWN6 122 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 PMCHL2Q9BQD1 86 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 LINC00472Q9H8W2 130 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 CCNB3Q8WWL7 1395 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 VPS8Q8N3P4 1428 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 KCPQ6ZWJ8 1503 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 POLQO75417 2590 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 CC2D2AQ9P2K1 1620 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 MYOM1P52179 1685 aa0.27□□□□□ -2.37
TRAJ47-201ENST00000390490 ZNF469Q96JG9 3925 aaPredicted RBP0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 A0A0D9SFI3 127 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 FAM223BA6NKX1 122 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 M0R3E3 92 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 NDUFC1O43677 76 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 S100A3P33764 101 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 PKIAP61925 76 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 UBA52P62987 128 aaKnown RBP0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 COL5A1-AS1Q5SY13 56 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 Q6JHZ5 121 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 DPY30Q9C005 99 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 TEX14Q8IWB6 1497 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 FYCO1Q9BQS8 1478 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 SHANK2Q9UPX8 1470 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 HMGXB3Q12766 1538 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 EHBP1L1Q8N3D4 1523 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 KDM5AP29375 1690 aaKnown RBP0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 KIF21AQ7Z4S6 1674 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 MYH8P13535 1937 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 DOCK11Q5JSL3 2073 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 FBN2P35556 2912 aa0.26□□□□□ -2.37
TRAJ47-201ENST00000390490 ABCA12Q86UK0 2595 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 FAM208BQ5VWN6 2430 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 ASXL3Q9C0F0 2248 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 DOCK2Q92608 1830 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 LRRC37A2A6NM11 1700 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 ARHGEF5Q12774 1597 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 DIP2CQ9Y2E4 1556 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 GAPVD1Q14C86 1478 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 ABCC10Q5T3U5 1492 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 ANKRD36BQ8N2N9 1353 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 A0A0G2JND7 137 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 A0A1B0GWA3 101 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 ATOX1O00244 68 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 BCE1O60756 84 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 PRH1P02810 166 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 SAA2P0DJI9 122 aaPredicted RBP0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 TMEM263Q8WUH6 116 aaKnown RBP0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 VAMP8Q9BV40 100 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 CNFNQ9BYD5 112 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 PRO0255Q9UI72 69 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 SPCS1Q9Y6A9 102 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 MEGF8Q7Z7M0 2845 aa0.25□□□□□ -2.37
TRAJ47-201ENST00000390490 TET3O43151 1660 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 TOPAZ1Q8N9V7 1692 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 TOP2BQ02880 1626 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 ERCC6L2Q5T890 1561 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 PRDM15P57071 1507 aaPredicted RBP0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 ADGRL2O95490 1459 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 MLH3Q9UHC1 1453 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 NSD3Q9BZ95 1437 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 C10orf142B7Z368 130 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 PMCHL1Q16048 86 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 C10orf113Q5VZT2 155 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 SERP2Q8N6R1 65 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 FDCSPQ8NFU4 85 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 SPRR4Q96PI1 79 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 TRGV9Q99603 122 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 SMR3AQ99954 134 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 SNHG12Q9BXW3 62 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 PRO1933Q9H354 126 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 CACFD1Q9UGQ2 172 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 APCP25054 2843 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 ZNF236Q9UL36 1845 aa0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 TPRP12270 2363 aaKnown RBP0.24□□□□□ -2.37
TRAJ47-201ENST00000390490 LRP6O75581 1613 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms