RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MYH13Q9UKX3 1938 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 PDE4DIPQ5VU43 2346 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 PLECQ15149 4684 aaKnown RBP-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 LINC00959A0A1B0GUT2 108 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 A0A1W2PRE2 83 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 F8VRH5 84 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 DPM2O94777 84 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 MT-ND4LP03901 98 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 S100A7L2Q5SY68 101 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 TMEM78Q5T7P6 136 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 Q6AWC8 147 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 BAGE2Q86Y30 109 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 CFAP53Q96M91 514 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 AMELXQ99217 191 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 RNF213Q63HN8 5207 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 DSPP15924 2871 aaKnown RBP-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 SYNMO15061 1565 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 SETBP1Q9Y6X0 1596 aa-0.97□□□□□ -2.56
SNORD28-201ENST00000384706 OVOS2A0A0G2JMS6 1433 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 DAPK1P53355 1430 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 A0A0C4DFX4 3053 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 RELNP78509 3460 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 UQCR11O14957 56 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 SSSCA1O60232 199 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 APOC3P02656 99 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 ALX1Q15699 326 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 MIC13Q5XKP0 118 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 PPP1R2P3Q6NXS1 205 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 CTAGE3PQ8IX95 158 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 OR8I2Q8N0Y5 310 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 NDUFA4L2Q9NRX3 87 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 DNAH2Q9P225 4427 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 ARHGEF10O15013 1369 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 CEP290O15078 2479 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 ANKRD50Q9ULJ7 1429 aa-0.98□□□□□ -2.57
SNORD28-201ENST00000384706 MAGI1Q96QZ7 1491 aaPredicted RBP-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 SHANK2Q9UPX8 1470 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 DNAH9Q9NYC9 4486 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 REV3LO60673 3130 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 WDR87Q6ZQQ6 2873 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 M0R129 80 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 IL5P05113 134 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 CBLN1P23435 193 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 S100A5P33763 92 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 TPPP2P59282 170 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 UBE2D3P61077 147 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 UBE2D2P62837 147 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 CCL8P80075 99 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 MT1HP80294 61 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 MRPS25P82663 173 aaKnown RBP-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 C10orf128Q5T292 105 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 TMEM244Q5VVB8 128 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 SCIMPQ6UWF3 145 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 Q8N8P6 123 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 AQP10Q96PS8 301 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 HOPXQ9BPY8 73 aaPredicted RBP-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 SEC11CQ9BY50 192 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 MRPL40Q9NQ50 206 aaKnown RBP-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 LENEPQ9Y5L5 61 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 PATJQ8NI35 1801 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 KALRNO60229 2985 aa-0.99□□□□□ -2.57
SNORD28-201ENST00000384706 BTAF1O14981 1849 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 DOCK2Q92608 1830 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 TRBV20-1A0A075B6N2 111 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 TMEM35BQ8NCS4 154 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 FDCSPQ8NFU4 85 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 OR9Q1Q8NGQ5 310 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 MAGOHBQ96A72 148 aaKnown RBP-1□□□□□ -2.57
SNORD28-201ENST00000384706 DISP2A7MBM2 1401 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 SYNJ1O43426 1573 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 RAPGEF6Q8TEU7 1601 aa-1□□□□□ -2.57
SNORD28-201ENST00000384706 RIMS1Q86UR5 1692 aaKnown RBP-1□□□□□ -2.57
SNORD28-201ENST00000384706 COL14A1Q05707 1796 aaKnown RBP-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 GCN1Q92616 2671 aaKnown RBP-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 UTP20O75691 2785 aaKnown RBP-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 CELSR3Q9NYQ7 3312 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 TRBV7-3A0A075B6L6 115 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 IGLC7A0M8Q6 106 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 C9orf92A6NGG3 77 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 SNCGO76070 127 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 SIX6O95475 246 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 NCS1P62166 190 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 SAMD13Q5VXD3 122 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 C10orf113Q5VZT2 155 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 TTC9CQ8N5M4 171 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 MNS1Q8NEH6 495 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 SPTSSAQ969W0 71 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 PSMG3Q9BT73 122 aaPredicted RBP-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 CRIPTQ9P021 101 aa-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 EIF3AQ14152 1382 aaKnown RBP-1.01□□□□□ -2.57
SNORD28-201ENST00000384706 TRANK1O15050 2925 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 TRAV13-2A0A0B4J235 113 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 SPAARA0A1B0GVQ0 90 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 HCG22E2RYF7 251 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 E2F6O75461 281 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 MGPP08493 103 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 MYH6P13533 1939 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 NKTRP30414 1462 aaKnown RBP-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 UBA52P62987 128 aaKnown RBP-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 TRIQKQ629K1 86 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms