RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
SRGAP3-202ENST00000383836 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
SRGAP3-202ENST00000383836 PMAIP1Q13794 54 aa9.41□□□□□ -0.9
SRGAP3-202ENST00000383836 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
SRGAP3-202ENST00000383836 SPART-AS1P0CW21 52 aa9.41□□□□□ -0.9
SRGAP3-202ENST00000383836 UFSP1Q6NVU6 142 aa9.41□□□□□ -0.9
SRGAP3-202ENST00000383836 Q8N9W7 124 aa9.41□□□□□ -0.9
SRGAP3-202ENST00000383836 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
SRGAP3-202ENST00000383836 COL4A4P53420 1690 aaPredicted RBP9.4□□□□□ -0.9
SRGAP3-202ENST00000383836 WFDC10BQ8IUB3 73 aa9.4□□□□□ -0.9
SRGAP3-202ENST00000383836 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.91
SRGAP3-202ENST00000383836 LINC00467Q9BRT7 94 aa9.4□□□□□ -0.91
SRGAP3-202ENST00000383836 IGHV4-59P01825 116 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 WT1P19544 449 aaPredicted RBP9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 GPHB5Q86YW7 130 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 FAM215AQ9Y5M1 114 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 TRBV27A0A0K0K1C4 114 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 LINC00526Q96FQ7 95 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 Q6JHZ5 121 aa9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
SRGAP3-202ENST00000383836 MIFP14174 115 aa9.38□□□□□ -0.91
SRGAP3-202ENST00000383836 KIR2DL5BQ8NHK3 375 aa9.38□□□□□ -0.91
SRGAP3-202ENST00000383836 LY6G6EA0A0G2JKS1 128 aa9.38□□□□□ -0.91
SRGAP3-202ENST00000383836 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
SRGAP3-202ENST00000383836 U3KQA8 63 aa9.38□□□□□ -0.91
SRGAP3-202ENST00000383836 A0A0J9YX75 114 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 ODF3Q96PU9 254 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 CCKP06307 115 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 DEFB112Q30KQ8 113 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 B9D2Q9BPU9 175 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 FAM222AQ5U5X8 452 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 TRAV7A0A075B6U4 112 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 SIRPDQ9H106 197 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 KLK12Q9UKR0 248 aa9.37□□□□□ -0.91
SRGAP3-202ENST00000383836 F8W735 103 aaPredicted RBP9.36□□□□□ -0.91
SRGAP3-202ENST00000383836 DEFB1P60022 68 aa9.36□□□□□ -0.91
SRGAP3-202ENST00000383836 BPTFQ12830 3046 aa9.36□□□□□ -0.91
SRGAP3-202ENST00000383836 COL4A3Q01955 1670 aa9.35□□□□□ -0.91
SRGAP3-202ENST00000383836 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
SRGAP3-202ENST00000383836 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
SRGAP3-202ENST00000383836 PLA2G5P39877 138 aa9.35□□□□□ -0.91
SRGAP3-202ENST00000383836 RNF138Q8WVD3 245 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 TRBV6-5A0A0K0K1A5 114 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 CRIP1P50238 77 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 RETNQ9HD89 108 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 FASNP49327 2511 aaKnown RBP9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 IGLV1-47P01700 117 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 NRACQ8N912 160 aa9.34□□□□□ -0.91
SRGAP3-202ENST00000383836 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
SRGAP3-202ENST00000383836 K7ENP7 123 aa9.33□□□□□ -0.92
SRGAP3-202ENST00000383836 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
SRGAP3-202ENST00000383836 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
SRGAP3-202ENST00000383836 M0QY20 66 aa9.32□□□□□ -0.92
SRGAP3-202ENST00000383836 IGHV4-38-2P0DP08 117 aa9.32□□□□□ -0.92
SRGAP3-202ENST00000383836 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
SRGAP3-202ENST00000383836 PYGO1Q9Y3Y4 419 aa9.32□□□□□ -0.92
SRGAP3-202ENST00000383836 C4orf3Q8WVX3 66 aa9.32□□□□□ -0.92
SRGAP3-202ENST00000383836 REG3AQ06141 175 aa9.31□□□□□ -0.92
SRGAP3-202ENST00000383836 UBE2D1P51668 147 aa9.31□□□□□ -0.92
SRGAP3-202ENST00000383836 PRO0255Q9UI72 69 aa9.31□□□□□ -0.92
SRGAP3-202ENST00000383836 NRGNQ92686 78 aa9.31□□□□□ -0.92
SRGAP3-202ENST00000383836 TMEM89A2RUT3 159 aa9.31□□□□□ -0.92
SRGAP3-202ENST00000383836 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 C6orf99Q4VX62 202 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 Q8N976 141 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 EIF4EBP1Q13541 118 aaPredicted RBP9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 Q6ZS46 218 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 IGLV2-11P01706 119 aa9.3□□□□□ -0.92
SRGAP3-202ENST00000383836 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 MYCNOSP40205 109 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 BRWD1-AS2P59051 145 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 PRR4Q16378 134 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 UBE2D4Q9Y2X8 147 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 Q6ZPA2 131 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 CCDC140Q96MF4 163 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 CHCHD10Q8WYQ3 142 aaPredicted RBP9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 MUC7Q8TAX7 377 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 LINC00574Q9H8X3 128 aa9.29□□□□□ -0.92
SRGAP3-202ENST00000383836 C22orf34Q6ZV56 151 aa9.28□□□□□ -0.92
SRGAP3-202ENST00000383836 EBI3Q14213 229 aa9.28□□□□□ -0.92
SRGAP3-202ENST00000383836 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
SRGAP3-202ENST00000383836 Q8N9L7 120 aa9.27□□□□□ -0.92
SRGAP3-202ENST00000383836 UBE2D3P61077 147 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 UBE2D2P62837 147 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 AKAP13Q12802 2813 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 FSTL3O95633 263 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 Q8N7P7 452 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 PRO0628Q9UI54 55 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 PRYO14603 147 aa9.27□□□□□ -0.93
SRGAP3-202ENST00000383836 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
SRGAP3-202ENST00000383836 C9orf85Q96MD7 179 aa9.26□□□□□ -0.93
SRGAP3-202ENST00000383836 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms