RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 COPS9Q8WXC6 57 aa14.08□□□□□ -0.16
CSPG5-202ENST00000383738 PRR9Q5T870 116 aa14.08□□□□□ -0.16
CSPG5-202ENST00000383738 BAALC-AS2P0C853 105 aa14.07□□□□□ -0.16
CSPG5-202ENST00000383738 MALP21145 153 aa14.07□□□□□ -0.16
CSPG5-202ENST00000383738 K7EMT4 169 aa14.06□□□□□ -0.16
CSPG5-202ENST00000383738 MRPS12O15235 138 aaKnown RBP14.06□□□□□ -0.16
CSPG5-202ENST00000383738 ITPR2Q14571 2701 aa14.06□□□□□ -0.16
CSPG5-202ENST00000383738 NXPH4O95158 308 aa14.06□□□□□ -0.16
CSPG5-202ENST00000383738 PSMB8P28062 276 aa14.06□□□□□ -0.16
CSPG5-202ENST00000383738 ATP6V0E2Q8NHE4 81 aa14.06□□□□□ -0.16
CSPG5-202ENST00000383738 A0A0J9YX75 114 aa14.05□□□□□ -0.16
CSPG5-202ENST00000383738 NOTCH1P46531 2555 aa14.05□□□□□ -0.16
CSPG5-202ENST00000383738 LEPROTO15243 131 aa14.05□□□□□ -0.16
CSPG5-202ENST00000383738 Q9HAA7 133 aa14.05□□□□□ -0.16
CSPG5-202ENST00000383738 PRB2P02812 416 aaPredicted RBP14.05□□□□□ -0.16
CSPG5-202ENST00000383738 IGHV3-30-3P0DP02 117 aa14.05□□□□□ -0.16
CSPG5-202ENST00000383738 C4orf3Q8WVX3 66 aa14.05□□□□□ -0.16
CSPG5-202ENST00000383738 TRBV10-2A0A0K0K1G8 114 aa14.04□□□□□ -0.16
CSPG5-202ENST00000383738 C9orf47Q6ZRZ4 202 aa14.03□□□□□ -0.16
CSPG5-202ENST00000383738 SLC25A29Q8N8R3 303 aa14.03□□□□□ -0.16
CSPG5-202ENST00000383738 TRIAP1O43715 76 aa14.03□□□□□ -0.16
CSPG5-202ENST00000383738 CRLF1O75462 422 aa14.03□□□□□ -0.16
CSPG5-202ENST00000383738 MAP6D1Q9H9H5 199 aa14.02□□□□□ -0.16
CSPG5-202ENST00000383738 RHODO00212 210 aa14.02□□□□□ -0.17
CSPG5-202ENST00000383738 IGHV3-33P01772 117 aa14.02□□□□□ -0.17
CSPG5-202ENST00000383738 LGALS9O00182 355 aa14.01□□□□□ -0.17
CSPG5-202ENST00000383738 DEFB114Q30KQ6 69 aa14.01□□□□□ -0.17
CSPG5-202ENST00000383738 ZNF580Q9UK33 172 aa14.01□□□□□ -0.17
CSPG5-202ENST00000383738 RELNP78509 3460 aa14□□□□□ -0.17
CSPG5-202ENST00000383738 RPL32P62910 135 aaKnown RBP14□□□□□ -0.17
CSPG5-202ENST00000383738 RBMY1BA6NDE4 496 aaKnown RBP14□□□□□ -0.17
CSPG5-202ENST00000383738 RBMY1EA6NEQ0 496 aaKnown RBP14□□□□□ -0.17
CSPG5-202ENST00000383738 RBMY1DP0C7P1 496 aaKnown RBP14□□□□□ -0.17
CSPG5-202ENST00000383738 RBMY1A1P0DJD3 496 aaKnown RBP14□□□□□ -0.17
CSPG5-202ENST00000383738 RBMY1CP0DJD4 496 aa14□□□□□ -0.17
CSPG5-202ENST00000383738 MRGPRG-AS1Q2M3A8 158 aa14□□□□□ -0.17
CSPG5-202ENST00000383738 C6orf226Q5I0X4 101 aa14□□□□□ -0.17
CSPG5-202ENST00000383738 CDIP1Q9H305 208 aa14□□□□□ -0.17
CSPG5-202ENST00000383738 LENEPQ9Y5L5 61 aa14□□□□□ -0.17
CSPG5-202ENST00000383738 A0A0J9YXY3 114 aa13.99□□□□□ -0.17
CSPG5-202ENST00000383738 K7EQG2 157 aa13.99□□□□□ -0.17
CSPG5-202ENST00000383738 F8W735 103 aaPredicted RBP13.98□□□□□ -0.17
CSPG5-202ENST00000383738 C9orf66Q5T8R8 295 aa13.98□□□□□ -0.17
CSPG5-202ENST00000383738 CFAP161Q6P656 301 aa13.98□□□□□ -0.17
CSPG5-202ENST00000383738 IGHV3-30P01768 117 aa13.98□□□□□ -0.17
CSPG5-202ENST00000383738 IGHV3-30-5P0DP03 117 aa13.98□□□□□ -0.17
CSPG5-202ENST00000383738 APOC4P55056 127 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 PROK1P58294 105 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 A0A1B0GX51 115 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 TSPEAR-AS2P59090 65 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 RHOHQ15669 191 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.97□□□□□ -0.17
CSPG5-202ENST00000383738 PSMG3-AS1Q96PY0 264 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 LAMTOR3Q9UHA4 124 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 CRYBG3Q68DQ2 2970 aa13.97□□□□□ -0.17
CSPG5-202ENST00000383738 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
CSPG5-202ENST00000383738 TMEM126AQ9H061 195 aa13.96□□□□□ -0.17
CSPG5-202ENST00000383738 SMCPP49901 116 aaPredicted RBP13.96□□□□□ -0.18
CSPG5-202ENST00000383738 TRACP01848 142 aa13.95□□□□□ -0.18
CSPG5-202ENST00000383738 IGLV10-54A0A075B6I4 117 aa13.95□□□□□ -0.18
CSPG5-202ENST00000383738 ZFAND2AQ8N6M9 145 aa13.95□□□□□ -0.18
CSPG5-202ENST00000383738 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
CSPG5-202ENST00000383738 C20orf203Q8NBC4 194 aa13.95□□□□□ -0.18
CSPG5-202ENST00000383738 IGLV1-40P01703 118 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 ZNF22P17026 224 aaPredicted RBP13.94□□□□□ -0.18
CSPG5-202ENST00000383738 HAMPP81172 84 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 Q6ZTI0 123 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 TMEM86BQ8N661 226 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 FAM110AQ9BQ89 295 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 INAFM2P0DMQ5 153 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 ZANQ9Y493 2812 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 ATP5G1P05496 136 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 SHISA2Q6UWI4 295 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 BAHCC1Q9P281 2608 aa13.94□□□□□ -0.18
CSPG5-202ENST00000383738 OXLD1Q5BKU9 147 aa13.93□□□□□ -0.18
CSPG5-202ENST00000383738 ZMAT4Q9H898 229 aa13.93□□□□□ -0.18
CSPG5-202ENST00000383738 TMEM89A2RUT3 159 aa13.93□□□□□ -0.18
CSPG5-202ENST00000383738 ANGP03950 147 aaKnown RBP13.93□□□□□ -0.18
CSPG5-202ENST00000383738 SDIM1Q6ZPB5 146 aa13.92□□□□□ -0.18
CSPG5-202ENST00000383738 HILS1P60008 231 aa13.92□□□□□ -0.18
CSPG5-202ENST00000383738 C5orf38Q86SI9 138 aa13.92□□□□□ -0.18
CSPG5-202ENST00000383738 GYPEP15421 78 aa13.91□□□□□ -0.18
CSPG5-202ENST00000383738 CDKN2A-AS1Q9UH64 79 aa13.91□□□□□ -0.18
CSPG5-202ENST00000383738 UTP20O75691 2785 aaKnown RBP13.91□□□□□ -0.18
CSPG5-202ENST00000383738 SOCS3O14543 225 aa13.91□□□□□ -0.18
CSPG5-202ENST00000383738 UBE2D1P51668 147 aa13.91□□□□□ -0.18
CSPG5-202ENST00000383738 S100A7L2Q5SY68 101 aa13.9□□□□□ -0.18
CSPG5-202ENST00000383738 TMEM243Q9BU79 118 aa13.9□□□□□ -0.18
CSPG5-202ENST00000383738 RNASE3P12724 160 aaKnown RBP13.9□□□□□ -0.18
CSPG5-202ENST00000383738 C14orf132Q9NPU4 83 aa13.9□□□□□ -0.19
CSPG5-202ENST00000383738 XCL1P47992 114 aa13.89□□□□□ -0.19
CSPG5-202ENST00000383738 DAZ2Q13117 558 aaKnown RBP13.89□□□□□ -0.19
CSPG5-202ENST00000383738 DAZ4Q86SG3 579 aaKnown RBP13.89□□□□□ -0.19
CSPG5-202ENST00000383738 DAZ3Q9NR90 486 aaKnown RBP13.89□□□□□ -0.19
CSPG5-202ENST00000383738 hADV29S1A0JD25 119 aa13.88□□□□□ -0.19
CSPG5-202ENST00000383738 KLK5Q9Y337 293 aaPredicted RBP13.88□□□□□ -0.19
CSPG5-202ENST00000383738 PIK3CD-AS1Q5SR53 167 aa13.87□□□□□ -0.19
CSPG5-202ENST00000383738 H3BT86 120 aa13.87□□□□□ -0.19
CSPG5-202ENST00000383738 IGLV2-18A0A075B6J9 118 aa13.87□□□□□ -0.19
CSPG5-202ENST00000383738 IGHV1-58A0A0C4DH39 117 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms