RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
CD9-202ENST00000382515 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
CD9-202ENST00000382515 NPSP0C0P6 89 aa11.8□□□□□ -0.52
CD9-202ENST00000382515 ZNF664Q8N3J9 261 aa11.8□□□□□ -0.52
CD9-202ENST00000382515 PYGO1Q9Y3Y4 419 aa11.8□□□□□ -0.52
CD9-202ENST00000382515 FRAS1Q86XX4 4008 aa11.79□□□□□ -0.52
CD9-202ENST00000382515 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
CD9-202ENST00000382515 COLCA2A8K830 154 aa11.79□□□□□ -0.52
CD9-202ENST00000382515 RAB5BP61020 215 aa11.79□□□□□ -0.52
CD9-202ENST00000382515 TNP2Q05952 138 aa11.79□□□□□ -0.52
CD9-202ENST00000382515 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
CD9-202ENST00000382515 CYSLTR1Q9Y271 337 aa11.78□□□□□ -0.52
CD9-202ENST00000382515 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.53
CD9-202ENST00000382515 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
CD9-202ENST00000382515 A0A087WTM6 91 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 LINC00614P0C842 121 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 RPL39P62891 51 aaKnown RBP11.75□□□□□ -0.53
CD9-202ENST00000382515 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 C18orf32Q8TCD1 76 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 AP5S1Q9NUS5 200 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
CD9-202ENST00000382515 C1orf196B1AJZ1 125 aa11.74□□□□□ -0.53
CD9-202ENST00000382515 SS18Q15532 418 aa11.74□□□□□ -0.53
CD9-202ENST00000382515 A0A1B0GVY2 172 aa11.73□□□□□ -0.53
CD9-202ENST00000382515 LRCOL1A6NCL2 159 aa11.73□□□□□ -0.53
CD9-202ENST00000382515 TRGC2P03986 189 aa11.73□□□□□ -0.53
CD9-202ENST00000382515 C14orf177Q52M58 125 aa11.73□□□□□ -0.53
CD9-202ENST00000382515 TOMM6Q96B49 74 aa11.73□□□□□ -0.53
CD9-202ENST00000382515 LINC00959A0A1B0GUT2 108 aa11.72□□□□□ -0.53
CD9-202ENST00000382515 CLPSL2Q6UWE3 100 aa11.72□□□□□ -0.53
CD9-202ENST00000382515 KRTAP26-1Q6PEX3 210 aa11.71□□□□□ -0.53
CD9-202ENST00000382515 Q6ZN92 141 aa11.71□□□□□ -0.53
CD9-202ENST00000382515 ERASQ7Z444 233 aa11.71□□□□□ -0.53
CD9-202ENST00000382515 TMEM141Q96I45 108 aa11.71□□□□□ -0.53
CD9-202ENST00000382515 TIMM17AQ99595 171 aa11.71□□□□□ -0.53
CD9-202ENST00000382515 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
CD9-202ENST00000382515 IGIPA6NJ69 53 aa11.7□□□□□ -0.54
CD9-202ENST00000382515 ATP6V1G1O75348 118 aa11.7□□□□□ -0.54
CD9-202ENST00000382515 CDPF1Q6NVV7 123 aa11.7□□□□□ -0.54
CD9-202ENST00000382515 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
CD9-202ENST00000382515 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
CD9-202ENST00000382515 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
CD9-202ENST00000382515 CHCHD10Q8WYQ3 142 aaPredicted RBP11.7□□□□□ -0.54
CD9-202ENST00000382515 CHCHD1Q96BP2 118 aaKnown RBP11.7□□□□□ -0.54
CD9-202ENST00000382515 IGLV10-54A0A075B6I4 117 aa11.69□□□□□ -0.54
CD9-202ENST00000382515 SCO1O75880 301 aa11.69□□□□□ -0.54
CD9-202ENST00000382515 CD164L2Q6UWJ8 174 aa11.69□□□□□ -0.54
CD9-202ENST00000382515 VCX2Q9H322 139 aa11.69□□□□□ -0.54
CD9-202ENST00000382515 IGLV4-3A0A075B6K6 122 aa11.68□□□□□ -0.54
CD9-202ENST00000382515 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
CD9-202ENST00000382515 Q6ZUT4 128 aa11.68□□□□□ -0.54
CD9-202ENST00000382515 Q8N814 137 aa11.68□□□□□ -0.54
CD9-202ENST00000382515 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
CD9-202ENST00000382515 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
CD9-202ENST00000382515 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
CD9-202ENST00000382515 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
CD9-202ENST00000382515 GAGE12HA6NDE8 117 aa11.66□□□□□ -0.54
CD9-202ENST00000382515 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
CD9-202ENST00000382515 AMELXQ99217 191 aa11.66□□□□□ -0.54
CD9-202ENST00000382515 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.54
CD9-202ENST00000382515 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
CD9-202ENST00000382515 HBDP02042 147 aa11.65□□□□□ -0.54
CD9-202ENST00000382515 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
CD9-202ENST00000382515 URB1-AS1Q96HZ7 61 aa11.65□□□□□ -0.54
CD9-202ENST00000382515 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
CD9-202ENST00000382515 XCL1P47992 114 aa11.64□□□□□ -0.55
CD9-202ENST00000382515 SEC11AP67812 179 aa11.64□□□□□ -0.55
CD9-202ENST00000382515 FOXI1Q12951 378 aa11.64□□□□□ -0.55
CD9-202ENST00000382515 DNAH11Q96DT5 4516 aa11.64□□□□□ -0.55
CD9-202ENST00000382515 PKD1P98161 4303 aa11.64□□□□□ -0.55
CD9-202ENST00000382515 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
CD9-202ENST00000382515 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.63□□□□□ -0.55
CD9-202ENST00000382515 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
CD9-202ENST00000382515 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
CD9-202ENST00000382515 ATP5LO75964 103 aa11.62□□□□□ -0.55
CD9-202ENST00000382515 HSBP1O75506 76 aa11.61□□□□□ -0.55
CD9-202ENST00000382515 FAM19A3Q7Z5A8 133 aa11.61□□□□□ -0.55
CD9-202ENST00000382515 EPPK1P58107 5090 aaKnown RBP11.61□□□□□ -0.55
CD9-202ENST00000382515 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
CD9-202ENST00000382515 COX7A2LO14548 114 aa11.6□□□□□ -0.55
CD9-202ENST00000382515 LECT2O14960 151 aa11.6□□□□□ -0.55
CD9-202ENST00000382515 UBE2D1P51668 147 aa11.6□□□□□ -0.55
CD9-202ENST00000382515 KRTAP10-2P60368 255 aa11.6□□□□□ -0.55
CD9-202ENST00000382515 PDZD11Q5EBL8 140 aa11.6□□□□□ -0.55
CD9-202ENST00000382515 A0A096LNJ9 63 aa11.59□□□□□ -0.55
CD9-202ENST00000382515 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
CD9-202ENST00000382515 APOMO95445 188 aa11.59□□□□□ -0.55
CD9-202ENST00000382515 WFDC2Q14508 124 aa11.59□□□□□ -0.55
CD9-202ENST00000382515 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
CD9-202ENST00000382515 BIRC6Q9NR09 4857 aa11.59□□□□□ -0.55
CD9-202ENST00000382515 IGLV5-52A0A0A0MRZ9 124 aa11.58□□□□□ -0.56
CD9-202ENST00000382515 C16orf90A8MZG2 172 aa11.58□□□□□ -0.56
CD9-202ENST00000382515 MALP21145 153 aa11.58□□□□□ -0.56
CD9-202ENST00000382515 PMVKQ15126 192 aa11.58□□□□□ -0.56
CD9-202ENST00000382515 LINC00242Q5T6M2 205 aa11.58□□□□□ -0.56
CD9-202ENST00000382515 LINC00173Q6ZV60 143 aa11.58□□□□□ -0.56
CD9-202ENST00000382515 HERVK_113P63121 156 aa11.57□□□□□ -0.56
CD9-202ENST00000382515 CST9LQ9H4G1 147 aa11.57□□□□□ -0.56
CD9-202ENST00000382515 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms