RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 INAFM2P0DMQ5 153 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 ZFYVE26Q68DK2 2539 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 RPL18AQ02543 176 aaKnown RBP10.85□□□□□ -0.67
CTNS-202ENST00000381870 C9orf129Q5T035 196 aaKnown RBP10.85□□□□□ -0.67
CTNS-202ENST00000381870 PRM2P04554 102 aa10.85□□□□□ -0.67
CTNS-202ENST00000381870 USMG5Q96IX5 58 aa10.85□□□□□ -0.67
CTNS-202ENST00000381870 A0A087WVE0 104 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 MALP21145 153 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 FAM222AQ5U5X8 452 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 LY6EQ16553 131 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 SORL1Q92673 2214 aa10.84□□□□□ -0.67
CTNS-202ENST00000381870 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 PRIMA1Q86XR5 153 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 USP24Q9UPU5 2620 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 RBMY1A1P0DJD3 496 aaKnown RBP10.83□□□□□ -0.68
CTNS-202ENST00000381870 RBMY1CP0DJD4 496 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 RBMY1FQ15415 496 aaKnown RBP10.83□□□□□ -0.68
CTNS-202ENST00000381870 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
CTNS-202ENST00000381870 VPS13CQ709C8 3753 aa10.82□□□□□ -0.68
CTNS-202ENST00000381870 WIPF1O43516 503 aa10.82□□□□□ -0.68
CTNS-202ENST00000381870 C14orf132Q9NPU4 83 aa10.82□□□□□ -0.68
CTNS-202ENST00000381870 TRAV25A0A0B4J276 109 aa10.81□□□□□ -0.68
CTNS-202ENST00000381870 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
CTNS-202ENST00000381870 TMEM258P61165 79 aa10.81□□□□□ -0.68
CTNS-202ENST00000381870 C4orf26Q17RF5 130 aa10.81□□□□□ -0.68
CTNS-202ENST00000381870 DNAL4O96015 105 aa10.81□□□□□ -0.68
CTNS-202ENST00000381870 UCNP55089 124 aa10.81□□□□□ -0.68
CTNS-202ENST00000381870 IGSF10Q6WRI0 2623 aa10.8□□□□□ -0.68
CTNS-202ENST00000381870 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
CTNS-202ENST00000381870 CCL21O00585 134 aa10.8□□□□□ -0.68
CTNS-202ENST00000381870 BLCAPP62952 87 aa10.8□□□□□ -0.68
CTNS-202ENST00000381870 SERP2Q8N6R1 65 aa10.8□□□□□ -0.68
CTNS-202ENST00000381870 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
CTNS-202ENST00000381870 SNRPD3P62318 126 aaKnown RBP10.8□□□□□ -0.68
CTNS-202ENST00000381870 LINC00242Q5T6M2 205 aa10.79□□□□□ -0.68
CTNS-202ENST00000381870 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
CTNS-202ENST00000381870 CFAP46Q8IYW2 2715 aa10.79□□□□□ -0.68
CTNS-202ENST00000381870 SPTAN1Q13813 2472 aaKnown RBP10.79□□□□□ -0.68
CTNS-202ENST00000381870 SYNJ2BPP57105 145 aa10.79□□□□□ -0.68
CTNS-202ENST00000381870 LMO4P61968 165 aa10.79□□□□□ -0.68
CTNS-202ENST00000381870 LINC01561Q8N1V8 128 aa10.79□□□□□ -0.68
CTNS-202ENST00000381870 A0A087WYN8 130 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 SMIM1B2RUZ4 78 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 K7EMT4 169 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 HIST2H2BCQ6DN03 193 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 HIST2H2BDQ6DRA6 164 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 DGAT2L7PQ6IED9 249 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 A0A1W2PPR1 153 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 H3BUA1 57 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 FBXL19-AS1Q494R0 122 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
CTNS-202ENST00000381870 AKAP6Q13023 2319 aa10.77□□□□□ -0.69
CTNS-202ENST00000381870 K7EQG2 157 aa10.77□□□□□ -0.69
CTNS-202ENST00000381870 Q6JHZ5 121 aa10.77□□□□□ -0.69
CTNS-202ENST00000381870 HRCT1Q6UXD1 115 aa10.77□□□□□ -0.69
CTNS-202ENST00000381870 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
CTNS-202ENST00000381870 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
CTNS-202ENST00000381870 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
CTNS-202ENST00000381870 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
CTNS-202ENST00000381870 Q5XG85 94 aa10.76□□□□□ -0.69
CTNS-202ENST00000381870 PRORYQ9H606 182 aa10.76□□□□□ -0.69
CTNS-202ENST00000381870 LINC00337Q8N6G1 96 aa10.75□□□□□ -0.69
CTNS-202ENST00000381870 H3BUX3 64 aa10.74□□□□□ -0.69
CTNS-202ENST00000381870 ZNF415Q09FC8 603 aa10.74□□□□□ -0.69
CTNS-202ENST00000381870 CRPP02741 224 aa10.73□□□□□ -0.69
CTNS-202ENST00000381870 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
CTNS-202ENST00000381870 NCR3O14931 201 aa10.73□□□□□ -0.69
CTNS-202ENST00000381870 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
CTNS-202ENST00000381870 TRAV13-2A0A0B4J235 113 aa10.72□□□□□ -0.69
CTNS-202ENST00000381870 FHL2Q14192 279 aa10.72□□□□□ -0.69
CTNS-202ENST00000381870 SMIM11BQ8TCY0 68 aa10.72□□□□□ -0.69
CTNS-202ENST00000381870 F5H768 121 aa10.71□□□□□ -0.69
CTNS-202ENST00000381870 IGHV4-38-2P0DP08 117 aa10.71□□□□□ -0.69
CTNS-202ENST00000381870 C10orf99Q6UWK7 81 aa10.71□□□□□ -0.69
CTNS-202ENST00000381870 OBSCN-AS1Q96MR7 158 aa10.71□□□□□ -0.69
CTNS-202ENST00000381870 IGHV3-53P01767 116 aa10.7□□□□□ -0.7
CTNS-202ENST00000381870 HILS1P60008 231 aa10.7□□□□□ -0.7
CTNS-202ENST00000381870 ADORA2A-AS1P86434 159 aa10.7□□□□□ -0.7
CTNS-202ENST00000381870 ABCA2Q9BZC7 2435 aa10.7□□□□□ -0.7
CTNS-202ENST00000381870 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.77e-6■□□□□ 9.3
CTNS-202ENST00000381870 PRB1P04280 392 aa10.7□□□□□ -0.7
CTNS-202ENST00000381870 C10orf105Q8TEF2 133 aa10.7□□□□□ -0.7
CTNS-202ENST00000381870 A6NDX4 124 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 SLPIP03973 132 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 CFHR3Q02985 330 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 MIR7-3HGQ8N6C7 128 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 Q96MF0 132 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 PF4P02776 101 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 SND1-IT1Q9HBX3 110 aa10.69□□□□□ -0.7
CTNS-202ENST00000381870 LECT2O14960 151 aa10.68□□□□□ -0.7
CTNS-202ENST00000381870 WFDC9Q8NEX5 89 aa10.68□□□□□ -0.7
CTNS-202ENST00000381870 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
CTNS-202ENST00000381870 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
CTNS-202ENST00000381870 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
CTNS-202ENST00000381870 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms