RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 UBE2D1P51668 147 aa14.21□□□□□ -0.14
FOXC1-201ENST00000380874 ODF3L2Q3SX64 289 aa14.2□□□□□ -0.14
FOXC1-201ENST00000380874 BAHCC1Q9P281 2608 aa14.2□□□□□ -0.14
FOXC1-201ENST00000380874 DEFB130BP0DP73 79 aa14.2□□□□□ -0.14
FOXC1-201ENST00000380874 DEFB130AP0DP74 79 aa14.2□□□□□ -0.14
FOXC1-201ENST00000380874 CDKN2A-AS1Q9UH64 79 aa14.2□□□□□ -0.14
FOXC1-201ENST00000380874 PRIMA1Q86XR5 153 aa14.19□□□□□ -0.14
FOXC1-201ENST00000380874 CHCHD5Q9BSY4 110 aa14.19□□□□□ -0.14
FOXC1-201ENST00000380874 IGHV1-58A0A0C4DH39 117 aa14.19□□□□□ -0.14
FOXC1-201ENST00000380874 SLC25A20O43772 301 aa14.18□□□□□ -0.14
FOXC1-201ENST00000380874 TMEM262E9PQX1 116 aa14.17□□□□□ -0.14
FOXC1-201ENST00000380874 Q9H8V8 135 aa14.17□□□□□ -0.14
FOXC1-201ENST00000380874 C1QTNF4Q9BXJ3 329 aa14.17□□□□□ -0.14
FOXC1-201ENST00000380874 PLA2G2AP14555 144 aa14.17□□□□□ -0.14
FOXC1-201ENST00000380874 FOXI1Q12951 378 aa14.16□□□□□ -0.14
FOXC1-201ENST00000380874 GAGE6Q13070 117 aa14.16□□□□□ -0.14
FOXC1-201ENST00000380874 NDUFA7O95182 113 aa14.16□□□□□ -0.14
FOXC1-201ENST00000380874 LRRC75A-AS1Q8N1F1 130 aa14.16□□□□□ -0.14
FOXC1-201ENST00000380874 RNF152Q8N8N0 203 aa14.16□□□□□ -0.14
FOXC1-201ENST00000380874 PPDPFLQ8WWR9 84 aa14.15□□□□□ -0.14
FOXC1-201ENST00000380874 DNAJC30Q96LL9 226 aa14.15□□□□□ -0.14
FOXC1-201ENST00000380874 UBE2D4Q9Y2X8 147 aa14.15□□□□□ -0.14
FOXC1-201ENST00000380874 ATXN8Q156A1 80 aa14.15□□□□□ -0.14
FOXC1-201ENST00000380874 FSHBP01225 129 aa14.14□□□□□ -0.15
FOXC1-201ENST00000380874 PYGO1Q9Y3Y4 419 aa14.14□□□□□ -0.15
FOXC1-201ENST00000380874 K7EQD1 137 aa14.14□□□□□ -0.15
FOXC1-201ENST00000380874 C11orf68Q9H3H3 251 aaKnown RBP14.14□□□□□ -0.15
FOXC1-201ENST00000380874 MXRA5Q9NR99 2828 aa14.14□□□□□ -0.15
FOXC1-201ENST00000380874 IGHV3-33P01772 117 aa14.13□□□□□ -0.15
FOXC1-201ENST00000380874 RPL13AP40429 203 aaKnown RBP14.13□□□□□ -0.15
FOXC1-201ENST00000380874 CHCHD7Q9BUK0 85 aa14.13□□□□□ -0.15
FOXC1-201ENST00000380874 ANKRD29Q8N6D5 301 aa14.13□□□□□ -0.15
FOXC1-201ENST00000380874 VSIG2Q96IQ7 327 aa14.13□□□□□ -0.15
FOXC1-201ENST00000380874 NTN5Q8WTR8 489 aaPredicted RBP14.12□□□□□ -0.15
FOXC1-201ENST00000380874 C2orf82Q6UX34 121 aa14.12□□□□□ -0.15
FOXC1-201ENST00000380874 C1orf158Q8N1D5 194 aa14.12□□□□□ -0.15
FOXC1-201ENST00000380874 TINCRA0A1B0GVN0 87 aa14.12□□□□□ -0.15
FOXC1-201ENST00000380874 TMEM243Q9BU79 118 aa14.12□□□□□ -0.15
FOXC1-201ENST00000380874 CSMD2Q7Z408 3487 aa14.12□□□□□ -0.15
FOXC1-201ENST00000380874 RS1O15537 224 aa14.11□□□□□ -0.15
FOXC1-201ENST00000380874 MRPS36P82909 103 aaKnown RBP14.11□□□□□ -0.15
FOXC1-201ENST00000380874 TEN1Q86WV5 123 aa14.11□□□□□ -0.15
FOXC1-201ENST00000380874 FBN2P35556 2912 aa14.11□□□□□ -0.15
FOXC1-201ENST00000380874 ESM1Q9NQ30 184 aa14.11□□□□□ -0.15
FOXC1-201ENST00000380874 HERVK_113P63121 156 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 TTC32Q5I0X7 151 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 ANAPC13Q9BS18 74 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 NF1P21359 2839 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 UNC79Q9P2D8 2635 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 VPS13CQ709C8 3753 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 TRAV25A0A0B4J276 109 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 LINC01006Q8NI28 216 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 ITPR2Q14571 2701 aa14.1□□□□□ -0.15
FOXC1-201ENST00000380874 A0A096LPF7 62 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 C11orf72Q8NBR9 251 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 ADAMTSL4-AS1Q5T5F5 129 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 TMEM263Q8WUH6 116 aaKnown RBP14.09□□□□□ -0.15
FOXC1-201ENST00000380874 AMELXQ99217 191 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 TMEM86BQ8N661 226 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 LOC100131303A0A0U1RQF7 123 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 LINC00694P0DN24 101 aa14.09□□□□□ -0.15
FOXC1-201ENST00000380874 SCGB1A1P11684 91 aa14.08□□□□□ -0.16
FOXC1-201ENST00000380874 CLEC2BQ92478 149 aa14.08□□□□□ -0.16
FOXC1-201ENST00000380874 ZFHX3Q15911 3703 aa14.08□□□□□ -0.16
FOXC1-201ENST00000380874 CUBNO60494 3623 aa14.08□□□□□ -0.16
FOXC1-201ENST00000380874 UBE2D3P61077 147 aa14.08□□□□□ -0.16
FOXC1-201ENST00000380874 UBE2D2P62837 147 aa14.08□□□□□ -0.16
FOXC1-201ENST00000380874 Q8N2B8 174 aa14.07□□□□□ -0.16
FOXC1-201ENST00000380874 LINC00158P58513 81 aa14.07□□□□□ -0.16
FOXC1-201ENST00000380874 LINC01620Q4KN68 170 aa14.07□□□□□ -0.16
FOXC1-201ENST00000380874 PRO0461Q9UI25 63 aa14.07□□□□□ -0.16
FOXC1-201ENST00000380874 ICOSQ9Y6W8 199 aa14.07□□□□□ -0.16
FOXC1-201ENST00000380874 A0A0B4J2C4 111 aa14.06□□□□□ -0.16
FOXC1-201ENST00000380874 SMCPP49901 116 aaPredicted RBP14.06□□□□□ -0.16
FOXC1-201ENST00000380874 CMC4P56277 68 aaPredicted RBP14.06□□□□□ -0.16
FOXC1-201ENST00000380874 MIAQ16674 131 aa14.06□□□□□ -0.16
FOXC1-201ENST00000380874 TRIAP1O43715 76 aa14.06□□□□□ -0.16
FOXC1-201ENST00000380874 SNCGO76070 127 aa14.06□□□□□ -0.16
FOXC1-201ENST00000380874 COX6A2Q02221 97 aa14.06□□□□□ -0.16
FOXC1-201ENST00000380874 SMR3AQ99954 134 aa14.05□□□□□ -0.16
FOXC1-201ENST00000380874 DAZ2Q13117 558 aaKnown RBP14.05□□□□□ -0.16
FOXC1-201ENST00000380874 DAZ4Q86SG3 579 aaKnown RBP14.05□□□□□ -0.16
FOXC1-201ENST00000380874 DAZ3Q9NR90 486 aaKnown RBP14.05□□□□□ -0.16
FOXC1-201ENST00000380874 CLPSL2Q6UWE3 100 aa14.04□□□□□ -0.16
FOXC1-201ENST00000380874 OR13C6PQ8NH95 151 aa14.04□□□□□ -0.16
FOXC1-201ENST00000380874 STAB1Q9NY15 2570 aa14.04□□□□□ -0.16
FOXC1-201ENST00000380874 HTN3P15516 51 aa14.04□□□□□ -0.16
FOXC1-201ENST00000380874 CR1P17927 2039 aa14.03□□□□□ -0.16
FOXC1-201ENST00000380874 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
FOXC1-201ENST00000380874 CRYBA4P53673 196 aa14.03□□□□□ -0.16
FOXC1-201ENST00000380874 PFN2P35080 140 aa14.03□□□□□ -0.16
FOXC1-201ENST00000380874 C5orf38Q86SI9 138 aa14.03□□□□□ -0.16
FOXC1-201ENST00000380874 C16orf74Q96GX8 76 aa14.02□□□□□ -0.16
FOXC1-201ENST00000380874 BEAN1Q3B7T3 259 aa14.02□□□□□ -0.17
FOXC1-201ENST00000380874 TRAV8-4A0A0B4J246 113 aa14.01□□□□□ -0.17
FOXC1-201ENST00000380874 TRBV10-1A0A0K0K1A3 114 aa14.01□□□□□ -0.17
FOXC1-201ENST00000380874 ZFAND6Q6FIF0 208 aa14.01□□□□□ -0.17
FOXC1-201ENST00000380874 COPS9Q8WXC6 57 aa14.01□□□□□ -0.17
FOXC1-201ENST00000380874 CARD19Q96LW7 228 aa14.01□□□□□ -0.17
FOXC1-201ENST00000380874 LINC00242Q5T6M2 205 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms