RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 A0A1B0GX51 115 aa10.78□□□□□ -0.68
PRNP-201ENST00000379440 TAL2Q16559 108 aa10.78□□□□□ -0.68
PRNP-201ENST00000379440 C1orf158Q8N1D5 194 aa10.78□□□□□ -0.68
PRNP-201ENST00000379440 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
PRNP-201ENST00000379440 TRBV25-1A0A075B6N4 114 aa10.78□□□□□ -0.68
PRNP-201ENST00000379440 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
PRNP-201ENST00000379440 KIR2DL5BQ8NHK3 375 aa10.77□□□□□ -0.69
PRNP-201ENST00000379440 NACAE9PAV3 2078 aa10.77□□□□□ -0.69
PRNP-201ENST00000379440 A8MWV9 139 aa10.77□□□□□ -0.69
PRNP-201ENST00000379440 CRLF1O75462 422 aa10.77□□□□□ -0.69
PRNP-201ENST00000379440 OPRPNQ99935 248 aaPredicted RBP10.77□□□□□ -0.69
PRNP-201ENST00000379440 I3L3M4 83 aa10.76□□□□□ -0.69
PRNP-201ENST00000379440 KRTAP10-3P60369 221 aa10.76□□□□□ -0.69
PRNP-201ENST00000379440 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
PRNP-201ENST00000379440 NDUFA7O95182 113 aa10.76□□□□□ -0.69
PRNP-201ENST00000379440 JMJD1CQ15652 2540 aa10.76□□□□□ -0.69
PRNP-201ENST00000379440 OTOGQ6ZRI0 2925 aa10.75□□□□□ -0.69
PRNP-201ENST00000379440 TIMM17AQ99595 171 aa10.75□□□□□ -0.69
PRNP-201ENST00000379440 PSMB2P49721 201 aa10.75□□□□□ -0.69
PRNP-201ENST00000379440 RPS28P62857 69 aaKnown RBP10.75□□□□□ -0.69
PRNP-201ENST00000379440 PMVKQ15126 192 aa10.75□□□□□ -0.69
PRNP-201ENST00000379440 TMEM141Q96I45 108 aa10.75□□□□□ -0.69
PRNP-201ENST00000379440 IGLV4-69A0A075B6H9 119 aa10.74□□□□□ -0.69
PRNP-201ENST00000379440 IGLV1-51P01701 117 aa10.74□□□□□ -0.69
PRNP-201ENST00000379440 RHOHQ15669 191 aa10.74□□□□□ -0.69
PRNP-201ENST00000379440 EDA2RQ9HAV5 297 aa10.74□□□□□ -0.69
PRNP-201ENST00000379440 LINC01549A6NIU2 74 aa10.73□□□□□ -0.69
PRNP-201ENST00000379440 C11orf86A6NJI1 115 aa10.73□□□□□ -0.69
PRNP-201ENST00000379440 C20orf203Q8NBC4 194 aa10.73□□□□□ -0.69
PRNP-201ENST00000379440 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
PRNP-201ENST00000379440 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
PRNP-201ENST00000379440 INAFM1C9JVW0 142 aa10.72□□□□□ -0.69
PRNP-201ENST00000379440 BEAN1Q3B7T3 259 aa10.72□□□□□ -0.69
PRNP-201ENST00000379440 SPANXCQ9NY87 97 aa10.72□□□□□ -0.69
PRNP-201ENST00000379440 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
PRNP-201ENST00000379440 CHCHD5Q9BSY4 110 aa10.72□□□□□ -0.69
PRNP-201ENST00000379440 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
PRNP-201ENST00000379440 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
PRNP-201ENST00000379440 HERVK_113P63121 156 aa10.71□□□□□ -0.69
PRNP-201ENST00000379440 C9orf153Q5TBE3 101 aa10.71□□□□□ -0.69
PRNP-201ENST00000379440 C10orf126Q8N4M7 172 aa10.71□□□□□ -0.69
PRNP-201ENST00000379440 ZNRF2Q8NHG8 242 aa10.71□□□□□ -0.69
PRNP-201ENST00000379440 RS1O15537 224 aa10.71□□□□□ -0.7
PRNP-201ENST00000379440 TRGV1A0A0A0MS02 117 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 SCGB1C2P0DMR2 95 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 HIST1H4GQ99525 98 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
PRNP-201ENST00000379440 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
PRNP-201ENST00000379440 MYMXA0A1B0GTQ4 84 aa10.69□□□□□ -0.7
PRNP-201ENST00000379440 IGHV3-53P01767 116 aa10.69□□□□□ -0.7
PRNP-201ENST00000379440 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
PRNP-201ENST00000379440 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
PRNP-201ENST00000379440 IL17DQ8TAD2 202 aa10.69□□□□□ -0.7
PRNP-201ENST00000379440 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
PRNP-201ENST00000379440 CMC4P56277 68 aaPredicted RBP10.68□□□□□ -0.7
PRNP-201ENST00000379440 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
PRNP-201ENST00000379440 Q6ZTI0 123 aa10.68□□□□□ -0.7
PRNP-201ENST00000379440 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
PRNP-201ENST00000379440 PF4P02776 101 aa10.67□□□□□ -0.7
PRNP-201ENST00000379440 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
PRNP-201ENST00000379440 NDUFA11Q86Y39 141 aa10.67□□□□□ -0.7
PRNP-201ENST00000379440 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
PRNP-201ENST00000379440 FN1P02751 2386 aaKnown RBP10.66□□□□□ -0.7
PRNP-201ENST00000379440 TMEM263Q8WUH6 116 aaKnown RBP10.66□□□□□ -0.7
PRNP-201ENST00000379440 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
PRNP-201ENST00000379440 ZNF815PA8K554 130 aa10.66□□□□□ -0.7
PRNP-201ENST00000379440 C3orf22Q8N5N4 141 aa10.66□□□□□ -0.7
PRNP-201ENST00000379440 CHCHD7Q9BUK0 85 aa10.66□□□□□ -0.7
PRNP-201ENST00000379440 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.7
PRNP-201ENST00000379440 TRBV7-3A0A075B6L6 115 aa10.65□□□□□ -0.7
PRNP-201ENST00000379440 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
PRNP-201ENST00000379440 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
PRNP-201ENST00000379440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.7
PRNP-201ENST00000379440 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.7
PRNP-201ENST00000379440 LINC00482Q8N8I6 264 aa10.65□□□□□ -0.7
PRNP-201ENST00000379440 SPATA3Q8NHX4 192 aa10.65□□□□□ -0.7
PRNP-201ENST00000379440 A0A0J9YXV3 536 aa10.64□□□□□ -0.71
PRNP-201ENST00000379440 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
PRNP-201ENST00000379440 NSD1Q96L73 2696 aaPredicted RBP10.64□□□□□ -0.71
PRNP-201ENST00000379440 HERVK_113P61574 105 aa10.64□□□□□ -0.71
PRNP-201ENST00000379440 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
PRNP-201ENST00000379440 UBE2D3P61077 147 aa10.63□□□□□ -0.71
PRNP-201ENST00000379440 UBE2D2P62837 147 aa10.63□□□□□ -0.71
PRNP-201ENST00000379440 PYGO1Q9Y3Y4 419 aa10.63□□□□□ -0.71
PRNP-201ENST00000379440 PLAC8L1A1L4L8 177 aa10.63□□□□□ -0.71
PRNP-201ENST00000379440 UQCRQO14949 82 aa10.63□□□□□ -0.71
PRNP-201ENST00000379440 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
PRNP-201ENST00000379440 HIVEP1P15822 2718 aa10.62□□□□□ -0.71
PRNP-201ENST00000379440 TRAV8-4A0A0B4J246 113 aa10.62□□□□□ -0.71
PRNP-201ENST00000379440 HRCT1Q6UXD1 115 aa10.62□□□□□ -0.71
PRNP-201ENST00000379440 UBE2D4Q9Y2X8 147 aa10.62□□□□□ -0.71
PRNP-201ENST00000379440 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 ZNF22P17026 224 aaPredicted RBP10.61□□□□□ -0.71
PRNP-201ENST00000379440 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 AMELXQ99217 191 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms