RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 WIPF1O43516 503 aa5.93□□□□□ -1.46
PTPRR-203ENST00000378778 CRPP02741 224 aa5.93□□□□□ -1.46
PTPRR-203ENST00000378778 IGHV3OR16-12A0A075B7B8 117 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 DNAL4O96015 105 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 Q6ZSV7 163 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 SERP2Q8N6R1 65 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.92□□□□□ -1.46
PTPRR-203ENST00000378778 IGHV3OR16-10A0A075B7F0 116 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 IGKV2-29A2NJV5 120 aaPredicted RBP5.92□□□□□ -1.46
PTPRR-203ENST00000378778 CYSRT1A8MQ03 144 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 NPC2P61916 151 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 CEMP1Q6PRD7 247 aaPredicted RBP5.92□□□□□ -1.46
PTPRR-203ENST00000378778 C22orf24Q9Y442 160 aa5.92□□□□□ -1.46
PTPRR-203ENST00000378778 BCE1O60756 84 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 LY6EQ16553 131 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 IGF2RP11717 2491 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 BLCAPP62952 87 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 CDSNQ15517 529 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 SOSTDC1Q6X4U4 206 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 UBE2E2Q96LR5 201 aa5.91□□□□□ -1.46
PTPRR-203ENST00000378778 LAMA5O15230 3695 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 HELZ2Q9BYK8 2649 aaKnown RBP5.9□□□□□ -1.46
PTPRR-203ENST00000378778 A0A1W2PPR1 153 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 F5H768 121 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 INSP01308 110 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 IGKV3-20P01619 116 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 BRD3OSQ6XYD6 125 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
PTPRR-203ENST00000378778 KLK5Q9Y337 293 aaPredicted RBP5.9□□□□□ -1.46
PTPRR-203ENST00000378778 SMIM9A6NGZ8 99 aa5.9□□□□□ -1.47
PTPRR-203ENST00000378778 A8MZ25 164 aa5.9□□□□□ -1.47
PTPRR-203ENST00000378778 RPL36AP83881 106 aaKnown RBP5.9□□□□□ -1.47
PTPRR-203ENST00000378778 C10orf105Q8TEF2 133 aa5.9□□□□□ -1.47
PTPRR-203ENST00000378778 RPL36ALQ969Q0 106 aaKnown RBP5.9□□□□□ -1.47
PTPRR-203ENST00000378778 DMXL2Q8TDJ6 3036 aa5.9□□□□□ -1.47
PTPRR-203ENST00000378778 RBMY1A1P0DJD3 496 aaKnown RBP5.89□□□□□ -1.47
PTPRR-203ENST00000378778 RBMY1CP0DJD4 496 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 IGHV4-38-2P0DP08 117 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
PTPRR-203ENST00000378778 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
PTPRR-203ENST00000378778 NACAE9PAV3 2078 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 TRBV10-3A0A0K0K1G6 114 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 MSMBP08118 114 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 COX6A2Q02221 97 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 Q8N2B8 174 aa5.89□□□□□ -1.47
PTPRR-203ENST00000378778 A0A1W2PRX2 142 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 PROK1P58294 105 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 DSCR9P59020 149 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 Q6ZSN1 163 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.88□□□□□ -1.47
PTPRR-203ENST00000378778 CDC42SE2Q9NRR3 84 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 CELSR3Q9NYQ7 3312 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 IGHV3-73A0A0B4J1V6 119 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 RBMY1BA6NDE4 496 aaKnown RBP5.88□□□□□ -1.47
PTPRR-203ENST00000378778 RBMY1EA6NEQ0 496 aaKnown RBP5.88□□□□□ -1.47
PTPRR-203ENST00000378778 IBA57-AS1B1ANH7 110 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 RBMY1DP0C7P1 496 aaKnown RBP5.88□□□□□ -1.47
PTPRR-203ENST00000378778 EDN2P20800 178 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 IL17DQ8TAD2 202 aa5.88□□□□□ -1.47
PTPRR-203ENST00000378778 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 J3QLI3 93 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 NDUFC2O95298 119 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 FAM218AQ96MZ4 157 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 B4DSR2 109 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 K7EQD1 137 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 HOXD3P31249 432 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-203ENST00000378778 SYNJ2BPP57105 145 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-203ENST00000378778 COX7B2Q8TF08 81 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 LINC00167Q96N53 147 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 UPK3BQ9BT76 320 aa5.87□□□□□ -1.47
PTPRR-203ENST00000378778 IGHV4-61A0A0C4DH41 118 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 hADV29S1A0JD25 119 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 DEFB131AP59861 70 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 SND1-IT1Q9HBX3 110 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 KALRNO60229 2985 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 TRAV25A0A0B4J276 109 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 LY6G6DO95868 133 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 C11orf44Q8N8P7 122 aa5.86□□□□□ -1.47
PTPRR-203ENST00000378778 ACACAQ13085 2346 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 KNCNA6PVL3 124 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 CCKP06307 115 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 DPH3Q96FX2 82 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 TMEM243Q9BU79 118 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 H3BQ85 93 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 LYPD5Q6UWN5 251 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 ORMDL1Q9P0S3 153 aa5.85□□□□□ -1.47
PTPRR-203ENST00000378778 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 UBE2L6O14933 153 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 CMC4P56277 68 aaPredicted RBP5.84□□□□□ -1.47
PTPRR-203ENST00000378778 LINC00337Q8N6G1 96 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 SMIM11BQ8TCY0 68 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 IGKV2-28A0A075B6P5 120 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 IGHV3-38A0A0C4DH36 116 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 IGKV2D-28P01615 120 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 AKAP13Q12802 2813 aa5.84□□□□□ -1.47
PTPRR-203ENST00000378778 ITPR1Q14643 2758 aa5.84□□□□□ -1.48
PTPRR-203ENST00000378778 DOPEY2Q9Y3R5 2298 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms