RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
SSU72-203ENST00000378725 OR5A1Q8NGJ0 315 aa12.44□□□□□ -0.42
SSU72-203ENST00000378725 C1orf43Q9BWL3 253 aa12.44□□□□□ -0.42
SSU72-203ENST00000378725 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
SSU72-203ENST00000378725 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
SSU72-203ENST00000378725 LINC01546A6NGU7 62 aa12.42□□□□□ -0.42
SSU72-203ENST00000378725 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
SSU72-203ENST00000378725 DGAT2L7PQ6IED9 249 aa12.42□□□□□ -0.42
SSU72-203ENST00000378725 PRSS3P2Q8NHM4 247 aa12.41□□□□□ -0.42
SSU72-203ENST00000378725 COLCA2A8K830 154 aa12.4□□□□□ -0.42
SSU72-203ENST00000378725 EREGO14944 169 aa12.4□□□□□ -0.42
SSU72-203ENST00000378725 FAM104AQ969W3 186 aa12.4□□□□□ -0.42
SSU72-203ENST00000378725 SPANXA1Q9NS26 97 aa12.4□□□□□ -0.42
SSU72-203ENST00000378725 BAALCQ8WXS3 180 aa12.39□□□□□ -0.43
SSU72-203ENST00000378725 PYGO1Q9Y3Y4 419 aa12.39□□□□□ -0.43
SSU72-203ENST00000378725 EPPK1P58107 5090 aaKnown RBP12.38□□□□□ -0.43
SSU72-203ENST00000378725 IGLV10-54A0A075B6I4 117 aa12.38□□□□□ -0.43
SSU72-203ENST00000378725 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
SSU72-203ENST00000378725 WFDC2Q14508 124 aa12.38□□□□□ -0.43
SSU72-203ENST00000378725 C18orf32Q8TCD1 76 aa12.38□□□□□ -0.43
SSU72-203ENST00000378725 PKD1P98161 4303 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 IGKV3OR2-268A0A0C4DH90 116 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 LINC00959A0A1B0GUT2 108 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 G0S2P27469 103 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 C2orf66Q6UXQ4 117 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 CYSLTR1Q9Y271 337 aa12.37□□□□□ -0.43
SSU72-203ENST00000378725 SCO1O75880 301 aa12.36□□□□□ -0.43
SSU72-203ENST00000378725 Q6ZUT4 128 aa12.36□□□□□ -0.43
SSU72-203ENST00000378725 Q8N814 137 aa12.36□□□□□ -0.43
SSU72-203ENST00000378725 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
SSU72-203ENST00000378725 CHCHD10Q8WYQ3 142 aaPredicted RBP12.35□□□□□ -0.43
SSU72-203ENST00000378725 OPRPNQ99935 248 aaPredicted RBP12.35□□□□□ -0.43
SSU72-203ENST00000378725 HECTD4Q9Y4D8 3996 aa12.35□□□□□ -0.43
SSU72-203ENST00000378725 CCL25O15444 150 aa12.34□□□□□ -0.43
SSU72-203ENST00000378725 TRGC2P03986 189 aa12.34□□□□□ -0.43
SSU72-203ENST00000378725 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
SSU72-203ENST00000378725 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
SSU72-203ENST00000378725 URB1-AS1Q96HZ7 61 aa12.34□□□□□ -0.43
SSU72-203ENST00000378725 GAGE12HA6NDE8 117 aa12.33□□□□□ -0.44
SSU72-203ENST00000378725 IGIPA6NJ69 53 aa12.33□□□□□ -0.44
SSU72-203ENST00000378725 LECT2O14960 151 aa12.33□□□□□ -0.44
SSU72-203ENST00000378725 NPSP0C0P6 89 aa12.33□□□□□ -0.44
SSU72-203ENST00000378725 LINC00614P0C842 121 aa12.33□□□□□ -0.44
SSU72-203ENST00000378725 SS18Q15532 418 aa12.33□□□□□ -0.44
SSU72-203ENST00000378725 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
SSU72-203ENST00000378725 DNAH11Q96DT5 4516 aa12.32□□□□□ -0.44
SSU72-203ENST00000378725 IGLV4-3A0A075B6K6 122 aa12.32□□□□□ -0.44
SSU72-203ENST00000378725 S100A1P23297 94 aa12.32□□□□□ -0.44
SSU72-203ENST00000378725 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
SSU72-203ENST00000378725 C1orf196B1AJZ1 125 aa12.31□□□□□ -0.44
SSU72-203ENST00000378725 FOXI1Q12951 378 aa12.31□□□□□ -0.44
SSU72-203ENST00000378725 CDPF1Q6NVV7 123 aa12.31□□□□□ -0.44
SSU72-203ENST00000378725 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
SSU72-203ENST00000378725 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
SSU72-203ENST00000378725 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
SSU72-203ENST00000378725 RAB5BP61020 215 aa12.3□□□□□ -0.44
SSU72-203ENST00000378725 CD164L2Q6UWJ8 174 aa12.3□□□□□ -0.44
SSU72-203ENST00000378725 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
SSU72-203ENST00000378725 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
SSU72-203ENST00000378725 TRAV13-1A0A0B4J241 112 aa12.29□□□□□ -0.44
SSU72-203ENST00000378725 XCL1P47992 114 aa12.29□□□□□ -0.44
SSU72-203ENST00000378725 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
SSU72-203ENST00000378725 C16orf90A8MZG2 172 aa12.28□□□□□ -0.44
SSU72-203ENST00000378725 FUSP35637 526 aaKnown RBP eCLIP12.28□□□□□ -0.448e-7■□□□□ 11.3
SSU72-203ENST00000378725 ERASQ7Z444 233 aa12.28□□□□□ -0.44
SSU72-203ENST00000378725 AMELXQ99217 191 aa12.28□□□□□ -0.44
SSU72-203ENST00000378725 ATP6V1G1O75348 118 aa12.27□□□□□ -0.45
SSU72-203ENST00000378725 SCGB3A1Q96QR1 104 aa12.27□□□□□ -0.45
SSU72-203ENST00000378725 A0A096LNJ9 63 aa12.26□□□□□ -0.45
SSU72-203ENST00000378725 IFITM10A6NMD0 228 aa12.26□□□□□ -0.45
SSU72-203ENST00000378725 PRSS1P07477 247 aa12.26□□□□□ -0.45
SSU72-203ENST00000378725 Q6ZN92 141 aa12.26□□□□□ -0.45
SSU72-203ENST00000378725 TEX43Q6ZNM6 134 aa12.26□□□□□ -0.45
SSU72-203ENST00000378725 CHCHD1Q96BP2 118 aaKnown RBP12.26□□□□□ -0.45
SSU72-203ENST00000378725 VCX2Q9H322 139 aa12.26□□□□□ -0.45
SSU72-203ENST00000378725 IGLV5-52A0A0A0MRZ9 124 aa12.25□□□□□ -0.45
SSU72-203ENST00000378725 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
SSU72-203ENST00000378725 CFAP161Q6P656 301 aa12.25□□□□□ -0.45
SSU72-203ENST00000378725 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
SSU72-203ENST00000378725 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
SSU72-203ENST00000378725 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
SSU72-203ENST00000378725 UBE2D1P51668 147 aa12.23□□□□□ -0.45
SSU72-203ENST00000378725 ZC2HC1BQ5TFG8 222 aa12.23□□□□□ -0.45
SSU72-203ENST00000378725 C2orf88Q9BSF0 95 aa12.23□□□□□ -0.45
SSU72-203ENST00000378725 IGHV3OR16-9A0A0B4J2B5 98 aa12.22□□□□□ -0.45
SSU72-203ENST00000378725 HBDP02042 147 aa12.22□□□□□ -0.45
SSU72-203ENST00000378725 PDZD11Q5EBL8 140 aa12.22□□□□□ -0.45
SSU72-203ENST00000378725 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
SSU72-203ENST00000378725 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
SSU72-203ENST00000378725 BAGE3Q86Y29 109 aa12.22□□□□□ -0.45
SSU72-203ENST00000378725 BIRC6Q9NR09 4857 aa12.21□□□□□ -0.45
SSU72-203ENST00000378725 IGHV1-58A0A0C4DH39 117 aa12.21□□□□□ -0.45
SSU72-203ENST00000378725 COX7A2LO14548 114 aa12.21□□□□□ -0.45
SSU72-203ENST00000378725 GCSHP23434 173 aa12.21□□□□□ -0.45
SSU72-203ENST00000378725 PMCHL1Q16048 86 aa12.21□□□□□ -0.45
SSU72-203ENST00000378725 hDV102S1A0JD36 115 aa12.2□□□□□ -0.46
SSU72-203ENST00000378725 PKHD1P08F94 4074 aa12.2□□□□□ -0.46
SSU72-203ENST00000378725 DYNC1H1Q14204 4646 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms