RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 K7EMT4 169 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 M0R378 163 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 FHL1Q13642 323 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 C9orf66Q5T8R8 295 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 IGLV11-55A0A075B6I3 123 aa6.61□□□□□ -1.35
LIG3-202ENST00000378526 IGLV3-19P01714 112 aa6.6□□□□□ -1.35
LIG3-202ENST00000378526 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
LIG3-202ENST00000378526 REG3AQ06141 175 aa6.6□□□□□ -1.35
LIG3-202ENST00000378526 BPESC1Q9GZL8 116 aa6.6□□□□□ -1.35
LIG3-202ENST00000378526 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
LIG3-202ENST00000378526 LINC01547P58512 204 aaPredicted RBP6.6□□□□□ -1.35
LIG3-202ENST00000378526 COL5A3P25940 1745 aaPredicted RBP6.6□□□□□ -1.35
LIG3-202ENST00000378526 K7EIM0 57 aa6.6□□□□□ -1.35
LIG3-202ENST00000378526 CUL9Q8IWT3 2517 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 ACYP2P14621 99 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 F8P00451 2351 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 CSRP2Q16527 193 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 ZNRD1Q9P1U0 126 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 Q8N814 137 aa6.59□□□□□ -1.35
LIG3-202ENST00000378526 KTN1-AS1Q86SY8 53 aa6.59□□□□□ -1.36
LIG3-202ENST00000378526 IGKV1-17P01599 117 aa6.58□□□□□ -1.36
LIG3-202ENST00000378526 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
LIG3-202ENST00000378526 IGLV3-1P01715 115 aa6.58□□□□□ -1.36
LIG3-202ENST00000378526 HCG22E2RYF7 251 aa6.58□□□□□ -1.36
LIG3-202ENST00000378526 DNAJC9-AS1A6NH13 148 aa6.58□□□□□ -1.36
LIG3-202ENST00000378526 TFF2Q03403 129 aa6.58□□□□□ -1.36
LIG3-202ENST00000378526 C17orf82Q86X59 251 aaPredicted RBP6.57□□□□□ -1.36
LIG3-202ENST00000378526 TP53AIP1Q9HCN2 124 aa6.57□□□□□ -1.36
LIG3-202ENST00000378526 FLVCR1-AS1Q8TAF5 88 aa6.57□□□□□ -1.36
LIG3-202ENST00000378526 ATP11AUNQ6ZP68 121 aa6.57□□□□□ -1.36
LIG3-202ENST00000378526 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
LIG3-202ENST00000378526 PLA2G2EQ9NZK7 142 aa6.57□□□□□ -1.36
LIG3-202ENST00000378526 H3BPC8 53 aa6.57□□□□□ -1.36
LIG3-202ENST00000378526 RAI1Q7Z5J4 1906 aaPredicted RBP6.57□□□□□ -1.36
LIG3-202ENST00000378526 ZNF80P51504 273 aaPredicted RBP6.57□□□□□ -1.36
LIG3-202ENST00000378526 RUSC1-AS1Q66K80 236 aa6.57□□□□□ -1.36
LIG3-202ENST00000378526 XAGE1AQ9HD64 81 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 C2CD3Q4AC94 2353 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 A0A087WZ39 114 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 ZNF73O43830 326 aaPredicted RBP6.56□□□□□ -1.36
LIG3-202ENST00000378526 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 F8W735 103 aaPredicted RBP6.56□□□□□ -1.36
LIG3-202ENST00000378526 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 E7EQL1 145 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 GDF5OSQ5U4N7 250 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 ABCA2Q9BZC7 2435 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 PATE2Q6UY27 113 aa6.56□□□□□ -1.36
LIG3-202ENST00000378526 PINLYPA6NC86 204 aa6.55□□□□□ -1.36
LIG3-202ENST00000378526 B3GALT5-AS1P59052 145 aa6.55□□□□□ -1.36
LIG3-202ENST00000378526 A0A087WVE0 104 aa6.55□□□□□ -1.36
LIG3-202ENST00000378526 LCA10Q71F78 164 aa6.54□□□□□ -1.36
LIG3-202ENST00000378526 EDN2P20800 178 aa6.54□□□□□ -1.36
LIG3-202ENST00000378526 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
LIG3-202ENST00000378526 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
LIG3-202ENST00000378526 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
LIG3-202ENST00000378526 C1orf64Q8NEQ6 169 aa6.53□□□□□ -1.36
LIG3-202ENST00000378526 LINC00474Q9P2X8 69 aa6.53□□□□□ -1.36
LIG3-202ENST00000378526 A0A1B0GW54 56 aa6.53□□□□□ -1.36
LIG3-202ENST00000378526 CDIP1Q9H305 208 aa6.53□□□□□ -1.36
LIG3-202ENST00000378526 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
LIG3-202ENST00000378526 FRMD6-AS1P0C7T7 363 aa6.53□□□□□ -1.36
LIG3-202ENST00000378526 CEMP1Q6PRD7 247 aaPredicted RBP6.53□□□□□ -1.36
LIG3-202ENST00000378526 SONP18583 2426 aaKnown RBP6.52□□□□□ -1.37
LIG3-202ENST00000378526 A0A096LNI7 61 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 Q6ZTC4 211 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
LIG3-202ENST00000378526 IGLV2-8P01709 118 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 LY6LH3BQJ8 138 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 M0QY20 66 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 DOPEY1Q5JWR5 2465 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
LIG3-202ENST00000378526 TRBV6-4A0A1B0GX49 114 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 TRBV6-8A0A0A6YYG3 113 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 IL17DQ8TAD2 202 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 IGLV1-44P01699 117 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 C11orf53Q8IXP5 236 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 CSRP1P21291 193 aaKnown RBP6.51□□□□□ -1.37
LIG3-202ENST00000378526 Q8IZM0 81 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 A6NDX4 124 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 HIVEP3Q5T1R4 2406 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 X6R8D5 127 aa6.51□□□□□ -1.37
LIG3-202ENST00000378526 PRAC2D3DTV9 90 aa6.5□□□□□ -1.37
LIG3-202ENST00000378526 PCOTHQ58A44 107 aa6.5□□□□□ -1.37
LIG3-202ENST00000378526 EPOPA6NHQ4 379 aa6.5□□□□□ -1.37
LIG3-202ENST00000378526 LINC00322Q6ZN03 302 aaPredicted RBP6.5□□□□□ -1.37
LIG3-202ENST00000378526 C11orf1Q9H5F2 150 aa6.5□□□□□ -1.37
LIG3-202ENST00000378526 C4orf3Q8WVX3 66 aa6.5□□□□□ -1.37
LIG3-202ENST00000378526 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
LIG3-202ENST00000378526 COL18A1P39060 1754 aa6.49□□□□□ -1.37
LIG3-202ENST00000378526 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms