RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CDC42SE2Q9NRR3 84 aa14.38□□□□□ -0.11
CBWD3-202ENST00000377342 KMT2CQ8NEZ4 4911 aaKnown RBP14.38□□□□□ -0.11
CBWD3-202ENST00000377342 IGLV4-3A0A075B6K6 122 aa14.37□□□□□ -0.11
CBWD3-202ENST00000377342 NBDYA0A0U1RRE5 68 aa14.37□□□□□ -0.11
CBWD3-202ENST00000377342 ANGP03950 147 aaKnown RBP14.37□□□□□ -0.11
CBWD3-202ENST00000377342 KLK12Q9UKR0 248 aa14.37□□□□□ -0.11
CBWD3-202ENST00000377342 RNASE13Q5GAN3 156 aaKnown RBP14.36□□□□□ -0.11
CBWD3-202ENST00000377342 TIMM17AQ99595 171 aa14.36□□□□□ -0.11
CBWD3-202ENST00000377342 HYDINQ4G0P3 5121 aa14.36□□□□□ -0.11
CBWD3-202ENST00000377342 MRPS36P82909 103 aaKnown RBP14.36□□□□□ -0.11
CBWD3-202ENST00000377342 SMAGPQ0VAQ4 97 aa14.36□□□□□ -0.11
CBWD3-202ENST00000377342 ERASQ7Z444 233 aa14.36□□□□□ -0.11
CBWD3-202ENST00000377342 TMEM101Q96IK0 257 aa14.36□□□□□ -0.11
CBWD3-202ENST00000377342 LINC01549A6NIU2 74 aa14.35□□□□□ -0.11
CBWD3-202ENST00000377342 DGAT2L7PQ6IED9 249 aa14.35□□□□□ -0.11
CBWD3-202ENST00000377342 CLPSL2Q6UWE3 100 aa14.35□□□□□ -0.11
CBWD3-202ENST00000377342 ZNF664Q8N3J9 261 aa14.35□□□□□ -0.11
CBWD3-202ENST00000377342 SCGB3A1Q96QR1 104 aa14.35□□□□□ -0.11
CBWD3-202ENST00000377342 LINC00173Q6ZV60 143 aa14.34□□□□□ -0.11
CBWD3-202ENST00000377342 LINC00269Q8N2A0 174 aa14.34□□□□□ -0.11
CBWD3-202ENST00000377342 PRR34Q9NV39 138 aa14.34□□□□□ -0.11
CBWD3-202ENST00000377342 K7EP13 123 aa14.33□□□□□ -0.11
CBWD3-202ENST00000377342 TTC32Q5I0X7 151 aa14.33□□□□□ -0.11
CBWD3-202ENST00000377342 Q6ZR54 194 aa14.33□□□□□ -0.11
CBWD3-202ENST00000377342 C10orf126Q8N4M7 172 aa14.33□□□□□ -0.11
CBWD3-202ENST00000377342 TMA7Q9Y2S6 64 aaKnown RBP14.33□□□□□ -0.11
CBWD3-202ENST00000377342 IBA57-AS1B1ANH7 110 aa14.33□□□□□ -0.12
CBWD3-202ENST00000377342 NPSP0C0P6 89 aa14.33□□□□□ -0.12
CBWD3-202ENST00000377342 ENHOQ6UWT2 76 aa14.33□□□□□ -0.12
CBWD3-202ENST00000377342 M0R2N4 97 aa14.32□□□□□ -0.12
CBWD3-202ENST00000377342 S100A6P06703 90 aa14.32□□□□□ -0.12
CBWD3-202ENST00000377342 ZC2HC1BQ5TFG8 222 aa14.32□□□□□ -0.12
CBWD3-202ENST00000377342 TMEM141Q96I45 108 aa14.32□□□□□ -0.12
CBWD3-202ENST00000377342 TRAV9-2A0A087WT02 112 aa14.31□□□□□ -0.12
CBWD3-202ENST00000377342 REG3AQ06141 175 aa14.31□□□□□ -0.12
CBWD3-202ENST00000377342 HIST3H2BBQ8N257 126 aa14.31□□□□□ -0.12
CBWD3-202ENST00000377342 UBE2WQ96B02 151 aa14.3□□□□□ -0.12
CBWD3-202ENST00000377342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-202ENST00000377342 BAALCQ8WXS3 180 aa14.3□□□□□ -0.12
CBWD3-202ENST00000377342 AMELXQ99217 191 aa14.3□□□□□ -0.12
CBWD3-202ENST00000377342 DNAH2Q9P225 4427 aa14.29□□□□□ -0.12
CBWD3-202ENST00000377342 C5orf52A6NGY3 159 aa14.29□□□□□ -0.12
CBWD3-202ENST00000377342 ATP5LO75964 103 aa14.29□□□□□ -0.12
CBWD3-202ENST00000377342 LEPROTL1O95214 131 aa14.29□□□□□ -0.12
CBWD3-202ENST00000377342 FABP4P15090 132 aa14.29□□□□□ -0.12
CBWD3-202ENST00000377342 SNRPEP62304 92 aaKnown RBP14.29□□□□□ -0.12
CBWD3-202ENST00000377342 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
CBWD3-202ENST00000377342 CRPP02741 224 aa14.28□□□□□ -0.12
CBWD3-202ENST00000377342 RYR2Q92736 4967 aa14.28□□□□□ -0.12
CBWD3-202ENST00000377342 DNAH10Q8IVF4 4471 aa14.27□□□□□ -0.12
CBWD3-202ENST00000377342 Q6ZN92 141 aa14.27□□□□□ -0.12
CBWD3-202ENST00000377342 IFI27L1Q96BM0 104 aa14.27□□□□□ -0.12
CBWD3-202ENST00000377342 Q9HAA7 133 aa14.27□□□□□ -0.12
CBWD3-202ENST00000377342 IFITM10A6NMD0 228 aa14.26□□□□□ -0.13
CBWD3-202ENST00000377342 TEX43Q6ZNM6 134 aa14.26□□□□□ -0.13
CBWD3-202ENST00000377342 LINC00959A0A1B0GUT2 108 aa14.25□□□□□ -0.13
CBWD3-202ENST00000377342 MIAQ16674 131 aa14.25□□□□□ -0.13
CBWD3-202ENST00000377342 PACRGQ96M98 296 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-202ENST00000377342 VCX2Q9H322 139 aa14.25□□□□□ -0.13
CBWD3-202ENST00000377342 PAPPA-AS1Q5QFB9 102 aa14.24□□□□□ -0.13
CBWD3-202ENST00000377342 HIST1H2BLQ99880 126 aa14.24□□□□□ -0.13
CBWD3-202ENST00000377342 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
CBWD3-202ENST00000377342 IGLV10-54A0A075B6I4 117 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 TRAV8-3A0A0A6YYJ7 113 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 TRAV13-1A0A0B4J241 112 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 UBE2D1P51668 147 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 PMVKQ15126 192 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 KRTAP26-1Q6PEX3 210 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 CST9LQ9H4G1 147 aa14.23□□□□□ -0.13
CBWD3-202ENST00000377342 C2orf88Q9BSF0 95 aa14.22□□□□□ -0.13
CBWD3-202ENST00000377342 Q6ZRN7 208 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-202ENST00000377342 FRAS1Q86XX4 4008 aa14.21□□□□□ -0.13
CBWD3-202ENST00000377342 PRSS29PA6NIE9 313 aa14.2□□□□□ -0.14
CBWD3-202ENST00000377342 S100A2P29034 98 aa14.2□□□□□ -0.14
CBWD3-202ENST00000377342 TRAV8-4A0A0B4J246 113 aa14.2□□□□□ -0.14
CBWD3-202ENST00000377342 C6orf223Q8N319 242 aa14.2□□□□□ -0.14
CBWD3-202ENST00000377342 CHCHD10Q8WYQ3 142 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-202ENST00000377342 C1orf43Q9BWL3 253 aa14.2□□□□□ -0.14
CBWD3-202ENST00000377342 IGKV2D-24A0A075B6R9 120 aa14.19□□□□□ -0.14
CBWD3-202ENST00000377342 CCL25O15444 150 aa14.19□□□□□ -0.14
CBWD3-202ENST00000377342 PRSS1P07477 247 aa14.19□□□□□ -0.14
CBWD3-202ENST00000377342 LINC00242Q5T6M2 205 aa14.19□□□□□ -0.14
CBWD3-202ENST00000377342 TRAV12-1A0A0B4J245 112 aa14.18□□□□□ -0.14
CBWD3-202ENST00000377342 SS18Q15532 418 aa14.18□□□□□ -0.14
CBWD3-202ENST00000377342 FAM19A3Q7Z5A8 133 aa14.18□□□□□ -0.14
CBWD3-202ENST00000377342 SPATA12Q7Z6I5 190 aa14.18□□□□□ -0.14
CBWD3-202ENST00000377342 IGLV4-69A0A075B6H9 119 aa14.17□□□□□ -0.14
CBWD3-202ENST00000377342 H0Y8G0 127 aa14.17□□□□□ -0.14
CBWD3-202ENST00000377342 XCL1P47992 114 aa14.17□□□□□ -0.14
CBWD3-202ENST00000377342 DNAH17Q9UFH2 4485 aa14.17□□□□□ -0.14
CBWD3-202ENST00000377342 C3orf79P0CE67 100 aa14.17□□□□□ -0.14
CBWD3-202ENST00000377342 MAP1LC3CQ9BXW4 147 aa14.17□□□□□ -0.14
CBWD3-202ENST00000377342 A0A0J9YXV3 536 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 COX6A2Q02221 97 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 ODF1Q14990 250 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 C1orf134Q5TEV5 83 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 NFE4Q86UQ8 179 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 MAPKAPK5-AS1Q8N8E1 139 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 RMI2Q96E14 147 aa14.16□□□□□ -0.14
CBWD3-202ENST00000377342 GAGE12HA6NDE8 117 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms