RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 B9D2Q9BPU9 175 aa13.21□□□□□ -0.3
CLSTN1-202ENST00000377298 LECT2O14960 151 aa13.2□□□□□ -0.3
CLSTN1-202ENST00000377298 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
CLSTN1-202ENST00000377298 PRR9Q5T870 116 aa13.2□□□□□ -0.3
CLSTN1-202ENST00000377298 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
CLSTN1-202ENST00000377298 HCFC1P51610 2035 aa13.19□□□□□ -0.3
CLSTN1-202ENST00000377298 A0A0J9YXY3 114 aa13.19□□□□□ -0.3
CLSTN1-202ENST00000377298 BBC3Q96PG8 261 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-202ENST00000377298 BRI3O95415 125 aa13.19□□□□□ -0.3
CLSTN1-202ENST00000377298 SPANXCQ9NY87 97 aa13.19□□□□□ -0.3
CLSTN1-202ENST00000377298 JMJD7-PLA2G4BH0Y9G9 81 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 PROK1P58294 105 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 C11orf21Q9P2W6 132 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 JMJD1CQ15652 2540 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 PYGO1Q9Y3Y4 419 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 ZNF22P17026 224 aaPredicted RBP13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 C2CD3Q4AC94 2353 aa13.18□□□□□ -0.3
CLSTN1-202ENST00000377298 SS18L2Q9UHA2 77 aa13.17□□□□□ -0.3
CLSTN1-202ENST00000377298 PIK3CD-AS1Q5SR53 167 aa13.17□□□□□ -0.3
CLSTN1-202ENST00000377298 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
CLSTN1-202ENST00000377298 COX7BP24311 80 aa13.16□□□□□ -0.3
CLSTN1-202ENST00000377298 ATG2AQ2TAZ0 1938 aa13.15□□□□□ -0.3
CLSTN1-202ENST00000377298 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
CLSTN1-202ENST00000377298 H3BT86 120 aa13.15□□□□□ -0.31
CLSTN1-202ENST00000377298 TRBV10-2A0A0K0K1G8 114 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 IBA57-AS1B1ANH7 110 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 Q8N976 141 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 C16orf95Q9H693 158 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 RBX1P62877 108 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 OXLD1Q5BKU9 147 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 HIGD2AQ9BW72 106 aa13.14□□□□□ -0.31
CLSTN1-202ENST00000377298 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 NREPQ16612 68 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 LRCOL1A6NCL2 159 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 TMEM256-PLSCR3K7ERE1 68 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 PRB2P02812 416 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 NRACQ8N912 160 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 MRGPRG-AS1Q2M3A8 158 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 PTH2Q96A98 100 aa13.13□□□□□ -0.31
CLSTN1-202ENST00000377298 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 A0A087WZ39 114 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 CLEC2BQ92478 149 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 A0A0B4J2C4 111 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 IGLV1-51P01701 117 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 TSHBP01222 138 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 LELP1Q5T871 98 aa13.12□□□□□ -0.31
CLSTN1-202ENST00000377298 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
CLSTN1-202ENST00000377298 LY6G6CO95867 125 aa13.11□□□□□ -0.31
CLSTN1-202ENST00000377298 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
CLSTN1-202ENST00000377298 RBM3P98179 157 aaKnown RBP13.1□□□□□ -0.31
CLSTN1-202ENST00000377298 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
CLSTN1-202ENST00000377298 USP9XQ93008 2570 aaPredicted RBP13.1□□□□□ -0.31
CLSTN1-202ENST00000377298 ZFYVE26Q68DK2 2539 aa13.1□□□□□ -0.31
CLSTN1-202ENST00000377298 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
CLSTN1-202ENST00000377298 PDE6GP18545 87 aa13.09□□□□□ -0.31
CLSTN1-202ENST00000377298 LINC00310P59036 64 aa13.09□□□□□ -0.31
CLSTN1-202ENST00000377298 M0R2N4 97 aa13.09□□□□□ -0.31
CLSTN1-202ENST00000377298 DSCAML1Q8TD84 2053 aa13.08□□□□□ -0.32
CLSTN1-202ENST00000377298 SYCNQ0VAF6 134 aa13.08□□□□□ -0.32
CLSTN1-202ENST00000377298 CD164L2Q6UWJ8 174 aa13.08□□□□□ -0.32
CLSTN1-202ENST00000377298 C7orf33Q8WU49 177 aa13.08□□□□□ -0.32
CLSTN1-202ENST00000377298 IGKV2D-26A0A0A0MRZ7 120 aa13.07□□□□□ -0.32
CLSTN1-202ENST00000377298 TCL1BO95988 128 aa13.07□□□□□ -0.32
CLSTN1-202ENST00000377298 CPAMD8Q8IZJ3 1885 aa13.07□□□□□ -0.32
CLSTN1-202ENST00000377298 SPANXB1Q9NS25 103 aaPredicted RBP13.07□□□□□ -0.32
CLSTN1-202ENST00000377298 MRPS36P82909 103 aaKnown RBP13.06□□□□□ -0.32
CLSTN1-202ENST00000377298 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
CLSTN1-202ENST00000377298 PRM2P04554 102 aa13.06□□□□□ -0.32
CLSTN1-202ENST00000377298 EDN2P20800 178 aa13.06□□□□□ -0.32
CLSTN1-202ENST00000377298 TLN2Q9Y4G6 2542 aa13.06□□□□□ -0.32
CLSTN1-202ENST00000377298 LOC100131303A0A0U1RQF7 123 aa13.06□□□□□ -0.32
CLSTN1-202ENST00000377298 C2orf91Q6ZV80 131 aa13.05□□□□□ -0.32
CLSTN1-202ENST00000377298 FAM19A1Q7Z5A9 133 aa13.05□□□□□ -0.32
CLSTN1-202ENST00000377298 LINC00308Q8TCZ7 52 aa13.05□□□□□ -0.32
CLSTN1-202ENST00000377298 UBE2D4Q9Y2X8 147 aa13.05□□□□□ -0.32
CLSTN1-202ENST00000377298 SMIM20Q8N5G0 67 aa13.04□□□□□ -0.32
CLSTN1-202ENST00000377298 UBE2D3P61077 147 aa13.04□□□□□ -0.32
CLSTN1-202ENST00000377298 UBE2D2P62837 147 aa13.04□□□□□ -0.32
CLSTN1-202ENST00000377298 MAPKAPK5-AS1Q8N8E1 139 aa13.04□□□□□ -0.32
CLSTN1-202ENST00000377298 FAM236AA0A1B0GUQ0 79 aa13.03□□□□□ -0.32
CLSTN1-202ENST00000377298 FAM236BA0A1B0GV22 79 aa13.03□□□□□ -0.32
CLSTN1-202ENST00000377298 CLUHP3Q96NS8 147 aa13.03□□□□□ -0.32
CLSTN1-202ENST00000377298 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
CLSTN1-202ENST00000377298 RAI1Q7Z5J4 1906 aaPredicted RBP13.02□□□□□ -0.33
CLSTN1-202ENST00000377298 A0A1B0GX51 115 aa13.02□□□□□ -0.33
CLSTN1-202ENST00000377298 A0A0J9YWU9 116 aa13.02□□□□□ -0.33
CLSTN1-202ENST00000377298 MP68P56378 58 aa13.02□□□□□ -0.33
CLSTN1-202ENST00000377298 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
CLSTN1-202ENST00000377298 H0Y9J4 135 aa13.01□□□□□ -0.33
CLSTN1-202ENST00000377298 XAGE1AQ9HD64 81 aa13.01□□□□□ -0.33
CLSTN1-202ENST00000377298 USP9YO00507 2555 aaPredicted RBP13.01□□□□□ -0.33
CLSTN1-202ENST00000377298 FAM19A5Q7Z5A7 132 aaPredicted RBP13.01□□□□□ -0.33
CLSTN1-202ENST00000377298 A0A096LNI7 61 aa13.01□□□□□ -0.33
CLSTN1-202ENST00000377298 TIMM17BO60830 172 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms