RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 RAB5AP20339 215 aa11.55□□□□□ -0.56
C6orf48-207ENST00000375642 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
C6orf48-207ENST00000375642 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
C6orf48-207ENST00000375642 Q8N814 137 aa11.55□□□□□ -0.56
C6orf48-207ENST00000375642 TMEM18Q96B42 140 aa11.55□□□□□ -0.56
C6orf48-207ENST00000375642 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
C6orf48-207ENST00000375642 LOC389332A0A1B0GUA5 103 aa11.54□□□□□ -0.56
C6orf48-207ENST00000375642 PRSS47A8MTI9 375 aa11.54□□□□□ -0.56
C6orf48-207ENST00000375642 WFDC2Q14508 124 aa11.54□□□□□ -0.56
C6orf48-207ENST00000375642 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
C6orf48-207ENST00000375642 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
C6orf48-207ENST00000375642 IGKV3OR2-268A0A0C4DH90 116 aa11.53□□□□□ -0.56
C6orf48-207ENST00000375642 MT-ND6P03923 174 aa11.53□□□□□ -0.56
C6orf48-207ENST00000375642 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
C6orf48-207ENST00000375642 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
C6orf48-207ENST00000375642 FUSP35637 526 aaKnown RBP eCLIP11.52□□□□□ -0.57
C6orf48-207ENST00000375642 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
C6orf48-207ENST00000375642 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.57
C6orf48-207ENST00000375642 KRTAP26-1Q6PEX3 210 aa11.51□□□□□ -0.57
C6orf48-207ENST00000375642 ZNF664Q8N3J9 261 aa11.51□□□□□ -0.57
C6orf48-207ENST00000375642 Q8N8P6 123 aa11.51□□□□□ -0.57
C6orf48-207ENST00000375642 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
C6orf48-207ENST00000375642 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
C6orf48-207ENST00000375642 FABP9Q0Z7S8 132 aa11.5□□□□□ -0.57
C6orf48-207ENST00000375642 TIMM21Q9BVV7 248 aa11.5□□□□□ -0.57
C6orf48-207ENST00000375642 MRPL18Q9H0U6 180 aaKnown RBP11.5□□□□□ -0.57
C6orf48-207ENST00000375642 IGLV5-52A0A0A0MRZ9 124 aa11.49□□□□□ -0.57
C6orf48-207ENST00000375642 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
C6orf48-207ENST00000375642 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
C6orf48-207ENST00000375642 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
C6orf48-207ENST00000375642 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
C6orf48-207ENST00000375642 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
C6orf48-207ENST00000375642 K7EMI3 77 aa11.47□□□□□ -0.57
C6orf48-207ENST00000375642 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
C6orf48-207ENST00000375642 CHCHD10Q8WYQ3 142 aaPredicted RBP11.47□□□□□ -0.57
C6orf48-207ENST00000375642 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
C6orf48-207ENST00000375642 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
C6orf48-207ENST00000375642 TRAPPC1Q9Y5R8 145 aa11.47□□□□□ -0.57
C6orf48-207ENST00000375642 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.57
C6orf48-207ENST00000375642 LINC00959A0A1B0GUT2 108 aa11.46□□□□□ -0.57
C6orf48-207ENST00000375642 SS18Q15532 418 aa11.46□□□□□ -0.57
C6orf48-207ENST00000375642 ORMDL2Q53FV1 153 aa11.46□□□□□ -0.57
C6orf48-207ENST00000375642 SMCO4Q9NRQ5 59 aa11.46□□□□□ -0.57
C6orf48-207ENST00000375642 GCSHP23434 173 aa11.45□□□□□ -0.58
C6orf48-207ENST00000375642 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
C6orf48-207ENST00000375642 XCL1P47992 114 aa11.44□□□□□ -0.58
C6orf48-207ENST00000375642 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
C6orf48-207ENST00000375642 Q6ZUT4 128 aa11.44□□□□□ -0.58
C6orf48-207ENST00000375642 YPEL4Q96NS1 127 aa11.44□□□□□ -0.58
C6orf48-207ENST00000375642 CCL25O15444 150 aa11.43□□□□□ -0.58
C6orf48-207ENST00000375642 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
C6orf48-207ENST00000375642 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
C6orf48-207ENST00000375642 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
C6orf48-207ENST00000375642 C1orf196B1AJZ1 125 aa11.42□□□□□ -0.58
C6orf48-207ENST00000375642 G0S2P27469 103 aa11.42□□□□□ -0.58
C6orf48-207ENST00000375642 MRPS36P82909 103 aaKnown RBP11.42□□□□□ -0.58
C6orf48-207ENST00000375642 C2orf66Q6UXQ4 117 aa11.42□□□□□ -0.58
C6orf48-207ENST00000375642 OPRPNQ99935 248 aaPredicted RBP11.42□□□□□ -0.58
C6orf48-207ENST00000375642 PYGO1Q9Y3Y4 419 aa11.42□□□□□ -0.58
C6orf48-207ENST00000375642 APOBP04114 4563 aaKnown RBP11.42□□□□□ -0.58
C6orf48-207ENST00000375642 TRAV13-1A0A0B4J241 112 aa11.41□□□□□ -0.58
C6orf48-207ENST00000375642 PRSS1P07477 247 aa11.41□□□□□ -0.58
C6orf48-207ENST00000375642 KRTAP10-1P60331 282 aa11.41□□□□□ -0.58
C6orf48-207ENST00000375642 FOXI1Q12951 378 aa11.41□□□□□ -0.58
C6orf48-207ENST00000375642 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
C6orf48-207ENST00000375642 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
C6orf48-207ENST00000375642 CD164L2Q6UWJ8 174 aa11.4□□□□□ -0.58
C6orf48-207ENST00000375642 hDV102S1A0JD36 115 aa11.39□□□□□ -0.59
C6orf48-207ENST00000375642 FA2HQ7L5A8 372 aa11.39□□□□□ -0.59
C6orf48-207ENST00000375642 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
C6orf48-207ENST00000375642 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
C6orf48-207ENST00000375642 IFITM10A6NMD0 228 aa11.38□□□□□ -0.59
C6orf48-207ENST00000375642 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
C6orf48-207ENST00000375642 NPSP0C0P6 89 aa11.36□□□□□ -0.59
C6orf48-207ENST00000375642 Q6ZN92 141 aa11.36□□□□□ -0.59
C6orf48-207ENST00000375642 Q8N1X5 172 aa11.36□□□□□ -0.59
C6orf48-207ENST00000375642 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
C6orf48-207ENST00000375642 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
C6orf48-207ENST00000375642 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
C6orf48-207ENST00000375642 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 LINC01620Q4KN68 170 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 C18orf32Q8TCD1 76 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 VCX2Q9H322 139 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 HSPG2P98160 4391 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 DNAH8Q96JB1 4490 aa11.35□□□□□ -0.59
C6orf48-207ENST00000375642 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
C6orf48-207ENST00000375642 COX7A2LO14548 114 aa11.34□□□□□ -0.59
C6orf48-207ENST00000375642 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
C6orf48-207ENST00000375642 PAPPA-AS1Q5QFB9 102 aa11.34□□□□□ -0.59
C6orf48-207ENST00000375642 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
C6orf48-207ENST00000375642 MALP21145 153 aa11.33□□□□□ -0.6
C6orf48-207ENST00000375642 CNBPP62633 177 aaKnown RBP11.33□□□□□ -0.6
C6orf48-207ENST00000375642 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
C6orf48-207ENST00000375642 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
C6orf48-207ENST00000375642 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
C6orf48-207ENST00000375642 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
C6orf48-207ENST00000375642 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
C6orf48-207ENST00000375642 LINC00614P0C842 121 aa11.32□□□□□ -0.6
C6orf48-207ENST00000375642 RAB5BP61020 215 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms