RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ZFP2Q6ZN57 461 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 WFDC10BQ8IUB3 73 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 C15orf54Q8N8G6 183 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 TSKUQ8WUA8 353 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 SMDT1Q9H4I9 107 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 OSTCQ9NRP0 149 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 MRPS16Q9Y3D3 137 aaKnown RBP2.91□□□□□ -1.94
PMS1-202ENST00000374826 V9GYV3 84 aa2.91□□□□□ -1.94
PMS1-202ENST00000374826 TRAV26-2A0A0B4J265 109 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 NBDYA0A0U1RRE5 68 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 F2Z2F3 143 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 TRGC1P0CF51 173 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 NTF3P20783 257 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 FOXA3P55318 350 aaPredicted RBP2.9□□□□□ -1.95
PMS1-202ENST00000374826 LINC00315P59091 139 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 RAB4BP61018 213 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 OR10J3Q5JRS4 329 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 LYPD5Q6UWN5 251 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 ATP6V0E2Q8NHE4 81 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 BORCS7Q96B45 105 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 UPK3BQ9BT76 320 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 DPH3P1Q9H4G8 78 aa2.9□□□□□ -1.95
PMS1-202ENST00000374826 TRBV7-3A0A075B6L6 115 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 TRBV10-1A0A0K0K1A3 114 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 A0A1B0GUT8 65 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 F8W036 122 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 SIVA1O15304 175 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 IGHV3-30P01768 117 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 IGHV3-33P01772 117 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 IGHV3-30-3P0DP02 117 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 IGHV3-30-5P0DP03 117 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 RYR1P21817 5038 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 UBE2D3P61077 147 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 UBE2D2P62837 147 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 MAJINQ3KP22 176 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 MRPL54Q6P161 138 aaKnown RBP2.89□□□□□ -1.95
PMS1-202ENST00000374826 UQCC3Q6UW78 93 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 NUP35Q8NFH5 326 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 DEFB104AQ8WTQ1 72 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 RPL39LQ96EH5 51 aaKnown RBP2.89□□□□□ -1.95
PMS1-202ENST00000374826 CNFNQ9BYD5 112 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 GTSF1LQ9H1H1 148 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 DNAH2Q9P225 4427 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 NAT8BQ9UHF3 227 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 DNAH17Q9UFH2 4485 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 FAT2Q9NYQ8 4349 aa2.89□□□□□ -1.95
PMS1-202ENST00000374826 EPPK1P58107 5090 aaKnown RBP2.88□□□□□ -1.95
PMS1-202ENST00000374826 TRAV8-6A0A0B4J262 113 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 SMIM27A0A1W2PRY6 76 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 TMEM218A2RU14 115 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 LINC00862A6NCI5 91 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 FAM231BA6NCW3 169 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 H7C1H1 209 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 M0QY20 66 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 NCR2O95944 276 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 TTC32Q5I0X7 151 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 LELP1Q5T871 98 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 C1orf134Q5TEV5 83 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 RASL11AQ6T310 242 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 SMIM15Q7Z3B0 74 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 AMN1Q8IY45 258 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 GATD1Q8NB37 220 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 BIRC6Q9NR09 4857 aa2.88□□□□□ -1.95
PMS1-202ENST00000374826 SMKR1H3BMG3 65 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 PPP1R2P9O14990 202 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 MT-ND4LP03901 98 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
PMS1-202ENST00000374826 LINC01556Q5JQF7 62 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 C6orf223Q8N319 242 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 RNF185Q96GF1 192 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 SEC11CQ9BY50 192 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 TMEM191AQ9H0A3 160 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 Q9HAA7 133 aa2.87□□□□□ -1.95
PMS1-202ENST00000374826 HECTD4Q9Y4D8 3996 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 A0A087WWC5 75 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 TRBV6-8A0A0A6YYG3 113 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 A0A1B0GXF2 115 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 RAB4AP20338 218 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 HBBP68871 147 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 MRPL51Q4U2R6 128 aaKnown RBP2.86□□□□□ -1.95
PMS1-202ENST00000374826 MPV17L2Q567V2 206 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 CLPSL2Q6UWE3 100 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 NTM-AS1Q6ZSK4 140 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 DAZ4Q86SG3 579 aaKnown RBP2.86□□□□□ -1.95
PMS1-202ENST00000374826 NIT1Q86X76 327 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.86□□□□□ -1.95
PMS1-202ENST00000374826 DNAJC30Q96LL9 226 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 NIT2Q9NQR4 276 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 DAZ3Q9NR90 486 aaKnown RBP2.86□□□□□ -1.95
PMS1-202ENST00000374826 CARHSP1Q9Y2V2 147 aaKnown RBP2.86□□□□□ -1.95
PMS1-202ENST00000374826 URGCP-MRPS24S4R325 110 aa2.86□□□□□ -1.95
PMS1-202ENST00000374826 PKD1P98161 4303 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 TRBV25-1A0A075B6N4 114 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 A0A087WX48 190 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 IGHV1-24A0A0C4DH33 117 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 A0A1B0GW15 77 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 C7orf77A4D0Y5 90 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 A4D1N5 150 aa2.85□□□□□ -1.95
PMS1-202ENST00000374826 SDHAF1A6NFY7 115 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms