RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 OR2D3Q8NGH3 330 aa5.41□□□□□ -1.54
HLA-DOA-202ENST00000374813 MARVELD1Q9BSK0 173 aa5.41□□□□□ -1.54
HLA-DOA-202ENST00000374813 NUPR1O60356 82 aa5.4□□□□□ -1.54
HLA-DOA-202ENST00000374813 TRGC1P0CF51 173 aa5.4□□□□□ -1.54
HLA-DOA-202ENST00000374813 AKR1C3P42330 323 aa5.4□□□□□ -1.54
HLA-DOA-202ENST00000374813 Q6ZNX1 250 aa5.4□□□□□ -1.54
HLA-DOA-202ENST00000374813 TPPP3Q9BW30 176 aa5.4□□□□□ -1.54
HLA-DOA-202ENST00000374813 MRPL35Q9NZE8 188 aaKnown RBP5.4□□□□□ -1.54
HLA-DOA-202ENST00000374813 F2Z2F3 143 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 G3V3Q6 166 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 UPK1BO75841 260 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 FHITP49789 147 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 CST9LP1Q5W188 147 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 STOML3Q8TAV4 291 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 FAM210AQ96ND0 272 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
HLA-DOA-202ENST00000374813 SCO2A0A1W2PP80 73 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 MAP1LC3B2A6NCE7 125 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 RPL28P46779 137 aaKnown RBP5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 DEFA1P59665 94 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 BAGE2Q86Y30 109 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 OR10D4PQ8NGN7 298 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 MAP1LC3BQ9GZQ8 125 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
HLA-DOA-202ENST00000374813 PAGE4O60829 102 aa5.37□□□□□ -1.55
HLA-DOA-202ENST00000374813 IGLC6P0CF74 106 aa5.37□□□□□ -1.55
HLA-DOA-202ENST00000374813 RPS20P60866 119 aaKnown RBP5.37□□□□□ -1.55
HLA-DOA-202ENST00000374813 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
HLA-DOA-202ENST00000374813 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
HLA-DOA-202ENST00000374813 ALG5Q9Y673 324 aa5.37□□□□□ -1.55
HLA-DOA-202ENST00000374813 I3L3M4 83 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 NDUFA1O15239 70 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 TEX261Q6UWH6 196 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 MRPL52Q86TS9 123 aaKnown RBP5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 MRAP2Q96G30 205 aa5.36□□□□□ -1.55
HLA-DOA-202ENST00000374813 XKRY2A2RUG3 117 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 SDHAF1A6NFY7 115 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 PMCHP20382 165 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 MT1HP80294 61 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 FAM229BQ4G0N7 80 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 AKR1C8PQ5T2L2 129 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 CTDSP1Q9GZU7 261 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 SMDT1Q9H4I9 107 aa5.35□□□□□ -1.55
HLA-DOA-202ENST00000374813 IGKV2D-26A0A0A0MRZ7 120 aa5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 A0A1B0GV50 99 aa5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 A0A1B0GVG6 124 aa5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 CYTL1Q9NRR1 136 aa5.34□□□□□ -1.55
HLA-DOA-202ENST00000374813 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
HLA-DOA-202ENST00000374813 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
HLA-DOA-202ENST00000374813 LINC00242Q5T6M2 205 aa5.33□□□□□ -1.56
HLA-DOA-202ENST00000374813 S100ZQ8WXG8 99 aa5.33□□□□□ -1.56
HLA-DOA-202ENST00000374813 ANAPC11Q9NYG5 84 aa5.33□□□□□ -1.56
HLA-DOA-202ENST00000374813 TRAV13-1A0A0B4J241 112 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 BCE1O60756 84 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 SPAG11AQ6PDA7 123 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 LYZL1Q6UWQ5 148 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 LINC00299Q6ZSB3 139 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 C9orf62Q8N4C0 152 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 ORAOV1Q8WV07 137 aa5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
HLA-DOA-202ENST00000374813 FXYD6-FXYD2A0A087WZ82 144 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 BORCS7-ASMTA0A0B4J1R7 106 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 NDUFC2-KCTD14E9PQ53 114 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 IFNA1P01562 189 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 CTRLP40313 264 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 RPL35P42766 123 aaKnown RBP5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 TWIST1Q15672 202 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 C10orf25Q5T742 122 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 TMUB2Q71RG4 321 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 SMIM15Q7Z3B0 74 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
HLA-DOA-202ENST00000374813 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
HLA-DOA-202ENST00000374813 C7orf77A4D0Y5 90 aa5.3□□□□□ -1.56
HLA-DOA-202ENST00000374813 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
HLA-DOA-202ENST00000374813 CENPWQ5EE01 88 aa5.3□□□□□ -1.56
HLA-DOA-202ENST00000374813 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
HLA-DOA-202ENST00000374813 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
HLA-DOA-202ENST00000374813 TRBV6-5A0A0K0K1A5 114 aa5.29□□□□□ -1.56
HLA-DOA-202ENST00000374813 PFDN1O60925 122 aa5.29□□□□□ -1.56
HLA-DOA-202ENST00000374813 SFT2D1Q8WV19 159 aa5.29□□□□□ -1.56
HLA-DOA-202ENST00000374813 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
HLA-DOA-202ENST00000374813 RAB19A4D1S5 217 aa5.28□□□□□ -1.56
HLA-DOA-202ENST00000374813 M0R2T5 61 aa5.28□□□□□ -1.56
HLA-DOA-202ENST00000374813 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
HLA-DOA-202ENST00000374813 C4orf48Q5BLP8 95 aa5.28□□□□□ -1.56
HLA-DOA-202ENST00000374813 FAM213BQ8TBF2 198 aa5.28□□□□□ -1.56
HLA-DOA-202ENST00000374813 MBD3L1Q8WWY6 194 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms