RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SAA1P0DJI8 122 aaPredicted RBP5.54□□□□□ -1.52
USP48-203ENST00000374732 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 Q8N814 137 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 WFDC9Q8NEX5 89 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 SPTBN4Q9H254 2564 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 IGHV1OR15-1A0A075B7D0 117 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 A6NED7 52 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 PRCDQ00LT1 54 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 LINC00846Q9NV44 126 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 USF3Q68DE3 2245 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 ACACBO00763 2458 aa5.54□□□□□ -1.52
USP48-203ENST00000374732 MSRB1Q9NZV6 116 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 IGHV3OR16-12A0A075B7B8 117 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 BAHCC1Q9P281 2608 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 A0A0J9YY99 117 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 FAM229AH3BQW9 127 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 IGLV1-51P01701 117 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 PLNP26678 52 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 SPINK9Q5DT21 86 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 DEFB108BQ8NET1 73 aa5.53□□□□□ -1.52
USP48-203ENST00000374732 TRAV12-3A0A0B4J271 114 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 D6R8Y8 96 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 GNLYP22749 145 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 MUSTN1Q8IVN3 82 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 LEAP2Q969E1 77 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 ICOSQ9Y6W8 199 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 C7orf69Q9H7B7 122 aa5.52□□□□□ -1.53
USP48-203ENST00000374732 UBR5O95071 2799 aaPredicted RBP5.52□□□□□ -1.53
USP48-203ENST00000374732 LYPD1Q8N2G4 141 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 CRPP02741 224 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 TMEM167AQ8TBQ9 72 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 PKD1L2Q7Z442 2459 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 NCOR2Q9Y618 2525 aa5.51□□□□□ -1.53
USP48-203ENST00000374732 CELSR3Q9NYQ7 3312 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 C11orf71Q6IPW1 123 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 ENHOQ6UWT2 76 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 FRYQ5TBA9 3013 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 ABCA4P78363 2273 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 IGHV3-16A0A0C4DH30 117 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 ERHP84090 104 aaKnown RBP5.5□□□□□ -1.53
USP48-203ENST00000374732 SMAD5-AS1Q9Y6J3 95 aa5.5□□□□□ -1.53
USP48-203ENST00000374732 RIF1Q5UIP0 2472 aaKnown RBP5.5□□□□□ -1.53
USP48-203ENST00000374732 RNASE13Q5GAN3 156 aaKnown RBP5.49□□□□□ -1.53
USP48-203ENST00000374732 KLHL30-AS1Q8NEE0 82 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 TMEM167BQ9NRX6 74 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 M0R3E3 92 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 FSHBP01225 129 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 CHTF8P0CG12 524 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 IGHV1-8P0DP01 117 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 CCL3L1P16619 93 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 C9orf66Q5T8R8 295 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 LYPD2Q6UXB3 125 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 RPP21Q9H633 154 aaKnown RBP5.49□□□□□ -1.53
USP48-203ENST00000374732 ZFHX4Q86UP3 3567 aa5.49□□□□□ -1.53
USP48-203ENST00000374732 EP300Q09472 2414 aaPredicted RBP5.48□□□□□ -1.53
USP48-203ENST00000374732 M0R1W7 72 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 IGLV2-23P01705 113 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 LOC400499M0QZD8 3231 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 RNF5Q99942 180 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 B9D2Q9BPU9 175 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 CHD6Q8TD26 2715 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 ARFGEF3Q5TH69 2177 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 TRBV7-4A0A0J9YYF1 115 aa5.48□□□□□ -1.53
USP48-203ENST00000374732 IGHV3-72A0A0B4J1Y9 119 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 PSCAO43653 123 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 IGLV2-11P01706 119 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 RPL36AP83881 106 aaKnown RBP5.47□□□□□ -1.53
USP48-203ENST00000374732 FAM167A-AS1Q96KT0 104 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 PRRC2AP48634 2157 aaKnown RBP5.47□□□□□ -1.53
USP48-203ENST00000374732 ASH1LQ9NR48 2969 aaKnown RBP5.47□□□□□ -1.53
USP48-203ENST00000374732 COL6A6A6NMZ7 2263 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 CADP27708 2225 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 SPENQ96T58 3664 aaKnown RBP5.47□□□□□ -1.53
USP48-203ENST00000374732 IGKV1OR2-108A0A075B7D4 117 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 IGLV1-47P01700 117 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 COX6B1P14854 86 aa5.47□□□□□ -1.53
USP48-203ENST00000374732 C14orf178Q8N769 122 aaPredicted RBP5.47□□□□□ -1.53
USP48-203ENST00000374732 DMXL1Q9Y485 3027 aa5.46□□□□□ -1.53
USP48-203ENST00000374732 TSHBP01222 138 aa5.46□□□□□ -1.53
USP48-203ENST00000374732 TMEM190Q8WZ59 177 aa5.46□□□□□ -1.53
USP48-203ENST00000374732 PRR15LQ9BU68 103 aa5.46□□□□□ -1.53
USP48-203ENST00000374732 MRGPRG-AS1Q2M3A8 158 aa5.46□□□□□ -1.54
USP48-203ENST00000374732 ZNF575Q86XF7 245 aa5.46□□□□□ -1.54
USP48-203ENST00000374732 ZNRD1Q9P1U0 126 aa5.46□□□□□ -1.54
USP48-203ENST00000374732 URB1O60287 2271 aaKnown RBP5.45□□□□□ -1.54
USP48-203ENST00000374732 TRAV10A0A0B4J240 114 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 F8VRH5 84 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 ROMO1P60602 79 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 WT1-ASQ06250 92 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 IGHV3-38A0A0C4DH36 116 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 A0A1B0GUT8 65 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms