RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 IGHV3OR16-12A0A075B7B8 117 aa13.03□□□□□ -0.32
HNF4A-203ENST00000372920 ZNF625Q96I27 306 aaPredicted RBP13.03□□□□□ -0.32
HNF4A-203ENST00000372920 MRPL23Q16540 153 aaKnown RBP13.03□□□□□ -0.32
HNF4A-203ENST00000372920 A0A0U1RRA0 63 aa13.02□□□□□ -0.32
HNF4A-203ENST00000372920 BEAN1Q3B7T3 259 aa13.02□□□□□ -0.32
HNF4A-203ENST00000372920 RS1O15537 224 aa13.01□□□□□ -0.33
HNF4A-203ENST00000372920 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
HNF4A-203ENST00000372920 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
HNF4A-203ENST00000372920 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
HNF4A-203ENST00000372920 LINC00242Q5T6M2 205 aa13.01□□□□□ -0.33
HNF4A-203ENST00000372920 MAP6D1Q9H9H5 199 aa13.01□□□□□ -0.33
HNF4A-203ENST00000372920 HERVK_113P63121 156 aa13□□□□□ -0.33
HNF4A-203ENST00000372920 NDUFA7O95182 113 aa12.99□□□□□ -0.33
HNF4A-203ENST00000372920 DSCR9P59020 149 aa12.99□□□□□ -0.33
HNF4A-203ENST00000372920 INSP01308 110 aa12.98□□□□□ -0.33
HNF4A-203ENST00000372920 LINC00694P0DN24 101 aa12.98□□□□□ -0.33
HNF4A-203ENST00000372920 SOSTDC1Q6X4U4 206 aa12.98□□□□□ -0.33
HNF4A-203ENST00000372920 Q6YL49 198 aa12.98□□□□□ -0.33
HNF4A-203ENST00000372920 COX7A2LO14548 114 aa12.97□□□□□ -0.33
HNF4A-203ENST00000372920 Q8N2B8 174 aa12.97□□□□□ -0.33
HNF4A-203ENST00000372920 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
HNF4A-203ENST00000372920 J3QLI3 93 aa12.97□□□□□ -0.33
HNF4A-203ENST00000372920 PEMTQ9UBM1 199 aa12.96□□□□□ -0.33
HNF4A-203ENST00000372920 TRAV13-1A0A0B4J241 112 aa12.96□□□□□ -0.34
HNF4A-203ENST00000372920 A0A096LNT2 108 aa12.95□□□□□ -0.34
HNF4A-203ENST00000372920 SHISA2Q6UWI4 295 aa12.95□□□□□ -0.34
HNF4A-203ENST00000372920 ZANQ9Y493 2812 aa12.95□□□□□ -0.34
HNF4A-203ENST00000372920 DYNLRB2Q8TF09 96 aa12.95□□□□□ -0.34
HNF4A-203ENST00000372920 XCL2Q9UBD3 114 aa12.95□□□□□ -0.34
HNF4A-203ENST00000372920 TRBV7-7A0A0K0K1E9 115 aa12.94□□□□□ -0.34
HNF4A-203ENST00000372920 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
HNF4A-203ENST00000372920 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
HNF4A-203ENST00000372920 FAM19A3Q7Z5A8 133 aa12.93□□□□□ -0.34
HNF4A-203ENST00000372920 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
HNF4A-203ENST00000372920 COPS9Q8WXC6 57 aa12.93□□□□□ -0.34
HNF4A-203ENST00000372920 TRGV1A0A0A0MS02 117 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 DEFB114Q30KQ6 69 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 NTM-AS1Q6ZSK4 140 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 CHCHD5Q9BSY4 110 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 USP9YO00507 2555 aaPredicted RBP12.92□□□□□ -0.34
HNF4A-203ENST00000372920 CFAP46Q8IYW2 2715 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 FLNCQ14315 2725 aa12.92□□□□□ -0.34
HNF4A-203ENST00000372920 MXRA5Q9NR99 2828 aa12.91□□□□□ -0.34
HNF4A-203ENST00000372920 FSHBP01225 129 aa12.91□□□□□ -0.34
HNF4A-203ENST00000372920 F5H768 121 aa12.91□□□□□ -0.34
HNF4A-203ENST00000372920 ACYP1P07311 99 aa12.91□□□□□ -0.34
HNF4A-203ENST00000372920 DOPEY1Q5JWR5 2465 aa12.91□□□□□ -0.34
HNF4A-203ENST00000372920 CSDC2Q9Y534 153 aaKnown RBP12.91□□□□□ -0.34
HNF4A-203ENST00000372920 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
HNF4A-203ENST00000372920 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
HNF4A-203ENST00000372920 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
HNF4A-203ENST00000372920 DAZ2Q13117 558 aaKnown RBP12.9□□□□□ -0.35
HNF4A-203ENST00000372920 DAZ4Q86SG3 579 aaKnown RBP12.9□□□□□ -0.35
HNF4A-203ENST00000372920 C1orf158Q8N1D5 194 aa12.9□□□□□ -0.35
HNF4A-203ENST00000372920 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.35
HNF4A-203ENST00000372920 DAZ3Q9NR90 486 aaKnown RBP12.9□□□□□ -0.35
HNF4A-203ENST00000372920 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
HNF4A-203ENST00000372920 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
HNF4A-203ENST00000372920 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
HNF4A-203ENST00000372920 K7EQD1 137 aa12.88□□□□□ -0.35
HNF4A-203ENST00000372920 TRACP01848 142 aa12.88□□□□□ -0.35
HNF4A-203ENST00000372920 SMCR5Q8TEV8 140 aa12.88□□□□□ -0.35
HNF4A-203ENST00000372920 FAM218AQ96MZ4 157 aa12.88□□□□□ -0.35
HNF4A-203ENST00000372920 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
HNF4A-203ENST00000372920 BAALC-AS2P0C853 105 aa12.87□□□□□ -0.35
HNF4A-203ENST00000372920 Q6ZTI0 123 aa12.87□□□□□ -0.35
HNF4A-203ENST00000372920 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
HNF4A-203ENST00000372920 HERV-K104P63124 156 aa12.87□□□□□ -0.35
HNF4A-203ENST00000372920 Q96MF0 132 aa12.87□□□□□ -0.35
HNF4A-203ENST00000372920 C22orf24Q9Y442 160 aa12.86□□□□□ -0.35
HNF4A-203ENST00000372920 STHQ8IWL8 128 aa12.86□□□□□ -0.35
HNF4A-203ENST00000372920 PKD1L2Q7Z442 2459 aa12.85□□□□□ -0.35
HNF4A-203ENST00000372920 FAM236AA0A1B0GUQ0 79 aa12.85□□□□□ -0.35
HNF4A-203ENST00000372920 FAM236BA0A1B0GV22 79 aa12.85□□□□□ -0.35
HNF4A-203ENST00000372920 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
HNF4A-203ENST00000372920 IMUPQ9GZP8 106 aa12.84□□□□□ -0.35
HNF4A-203ENST00000372920 POLQO75417 2590 aa12.83□□□□□ -0.36
HNF4A-203ENST00000372920 LINC00643Q86TS7 51 aa12.83□□□□□ -0.36
HNF4A-203ENST00000372920 HIST2H2BCQ6DN03 193 aa12.83□□□□□ -0.36
HNF4A-203ENST00000372920 ANKRD17O75179 2603 aaKnown RBP12.82□□□□□ -0.36
HNF4A-203ENST00000372920 FBN2P35556 2912 aa12.82□□□□□ -0.36
HNF4A-203ENST00000372920 UBE2L6O14933 153 aa12.82□□□□□ -0.36
HNF4A-203ENST00000372920 PPDPFQ9H3Y8 114 aa12.82□□□□□ -0.36
HNF4A-203ENST00000372920 Q9HAA7 133 aa12.82□□□□□ -0.36
HNF4A-203ENST00000372920 TMEM243Q9BU79 118 aa12.81□□□□□ -0.36
HNF4A-203ENST00000372920 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
HNF4A-203ENST00000372920 SDIM1Q6ZPB5 146 aa12.8□□□□□ -0.36
HNF4A-203ENST00000372920 SMIM20Q8N5G0 67 aa12.8□□□□□ -0.36
HNF4A-203ENST00000372920 TRAV13-2A0A0B4J235 113 aa12.8□□□□□ -0.36
HNF4A-203ENST00000372920 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
HNF4A-203ENST00000372920 LINC00337Q8N6G1 96 aa12.8□□□□□ -0.36
HNF4A-203ENST00000372920 C3orf56Q8N813 242 aa12.8□□□□□ -0.36
HNF4A-203ENST00000372920 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
HNF4A-203ENST00000372920 CRPP02741 224 aa12.79□□□□□ -0.36
HNF4A-203ENST00000372920 MIR7-3HGQ8N6C7 128 aa12.79□□□□□ -0.36
HNF4A-203ENST00000372920 MYO9AB2RTY4 2548 aa12.79□□□□□ -0.36
HNF4A-203ENST00000372920 PF4P02776 101 aa12.79□□□□□ -0.36
HNF4A-203ENST00000372920 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
HNF4A-203ENST00000372920 IGKV2-28A0A075B6P5 120 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms