RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 J3QQQ9 107 aa7.34□□□□□ -1.23
PRPF38B-203ENST00000370025 EIF4EBP3O60516 100 aaPredicted RBP7.34□□□□□ -1.23
PRPF38B-203ENST00000370025 IGHV3-33P01772 117 aa7.34□□□□□ -1.23
PRPF38B-203ENST00000370025 SPINK13Q1W4C9 94 aa7.34□□□□□ -1.23
PRPF38B-203ENST00000370025 ATXN8Q156A1 80 aa7.34□□□□□ -1.23
PRPF38B-203ENST00000370025 TRAV25A0A0B4J276 109 aa7.33□□□□□ -1.24
PRPF38B-203ENST00000370025 CRYGDP07320 174 aa7.33□□□□□ -1.24
PRPF38B-203ENST00000370025 EDA2RQ9HAV5 297 aa7.33□□□□□ -1.24
PRPF38B-203ENST00000370025 TRIAP1O43715 76 aa7.33□□□□□ -1.24
PRPF38B-203ENST00000370025 PRM2P04554 102 aa7.33□□□□□ -1.24
PRPF38B-203ENST00000370025 ZNRF2Q8NHG8 242 aa7.33□□□□□ -1.24
PRPF38B-203ENST00000370025 PROK1P58294 105 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 SLC25A29Q8N8R3 303 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 DAND5Q8N907 189 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 INAFM1C9JVW0 142 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 RNASE3P12724 160 aaKnown RBP7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 SPXQ9BT56 116 aa7.32□□□□□ -1.24
PRPF38B-203ENST00000370025 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 TSHBP01222 138 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 MAP6D1Q9H9H5 199 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 CSDC2Q9Y534 153 aaKnown RBP7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 IGHV3-16A0A0C4DH30 117 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 AKAP9Q99996 3911 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 IGHV1OR15-1A0A075B7D0 117 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 A8MZ25 164 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 NSUN5P1Q3KNT7 163 aa7.31□□□□□ -1.24
PRPF38B-203ENST00000370025 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 DGAT2L7PQ6IED9 249 aa7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 LINC01587Q99440 93 aa7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 ANK3Q12955 4377 aaKnown RBP7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 A8MTW9 85 aa7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 H7C423 109 aa7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 HERVK_113P63121 156 aa7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 TMEM263Q8WUH6 116 aaKnown RBP7.3□□□□□ -1.24
PRPF38B-203ENST00000370025 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
PRPF38B-203ENST00000370025 NF1P21359 2839 aa7.29□□□□□ -1.24
PRPF38B-203ENST00000370025 ZNF876PQ49A33 203 aa7.29□□□□□ -1.24
PRPF38B-203ENST00000370025 NXPH4O95158 308 aa7.29□□□□□ -1.24
PRPF38B-203ENST00000370025 IGHV3-53P01767 116 aa7.29□□□□□ -1.24
PRPF38B-203ENST00000370025 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
PRPF38B-203ENST00000370025 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
PRPF38B-203ENST00000370025 RPL13AP40429 203 aaKnown RBP7.28□□□□□ -1.24
PRPF38B-203ENST00000370025 CMC4P56277 68 aaPredicted RBP7.28□□□□□ -1.24
PRPF38B-203ENST00000370025 SDHAF1A6NFY7 115 aa7.28□□□□□ -1.24
PRPF38B-203ENST00000370025 C9orf85Q96MD7 179 aa7.28□□□□□ -1.24
PRPF38B-203ENST00000370025 MDFICQ9P1T7 246 aa7.28□□□□□ -1.24
PRPF38B-203ENST00000370025 MUC4Q99102 2169 aa7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 STHQ8IWL8 128 aa7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 TMEM101Q96IK0 257 aa7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 RBMY1BA6NDE4 496 aaKnown RBP7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 RBMY1EA6NEQ0 496 aaKnown RBP7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 RBMY1DP0C7P1 496 aaKnown RBP7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 ODF3L2Q3SX64 289 aa7.27□□□□□ -1.25
PRPF38B-203ENST00000370025 PPP1R17O96001 155 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 COX6CP09669 75 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 P0DMU3 169 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 FAM231AP0DMU4 169 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 FAM231CP0DMU5 169 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 PF4P02776 101 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 ICOSQ9Y6W8 199 aa7.26□□□□□ -1.25
PRPF38B-203ENST00000370025 M0R2P5 195 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 NBEAL2Q6ZNJ1 2754 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 TMEM126AQ9H061 195 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 INSP01308 110 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 Q6Q795 121 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 IGLV1-51P01701 117 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 RBMY1CP0DJD4 496 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 KRTAP10-3P60369 221 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 RBMY1FQ15415 496 aaKnown RBP7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 KIF25-AS1Q9Y6Z4 181 aa7.25□□□□□ -1.25
PRPF38B-203ENST00000370025 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 SMIM9A6NGZ8 99 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 ADAMTSL4-AS1Q5T5F5 129 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 POM121L12Q8N7R1 296 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 AMELXQ99217 191 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 RHOHQ15669 191 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 C5orf47Q569G3 176 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
PRPF38B-203ENST00000370025 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 GAGE2AQ6NT46 116 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 KIR2DL5BQ8NHK3 375 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 A0A0J9YXY3 114 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 I3L3M4 83 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 LINC00315P59091 139 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 SETXQ7Z333 2677 aaKnown RBP7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 C3orf22Q8N5N4 141 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 LINC00467Q9BRT7 94 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 TOMM7Q9P0U1 55 aa7.23□□□□□ -1.25
PRPF38B-203ENST00000370025 XCL2Q9UBD3 114 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms