RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
PRPF38B-202ENST00000370022 ANGP03950 147 aaKnown RBP10.48□□□□□ -0.73
PRPF38B-202ENST00000370022 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
PRPF38B-202ENST00000370022 FGF6P10767 208 aa10.47□□□□□ -0.73
PRPF38B-202ENST00000370022 Q0VG73 95 aa10.47□□□□□ -0.73
PRPF38B-202ENST00000370022 ORMDL2Q53FV1 153 aa10.47□□□□□ -0.73
PRPF38B-202ENST00000370022 C20orf203Q8NBC4 194 aa10.47□□□□□ -0.73
PRPF38B-202ENST00000370022 PRSS3P2Q8NHM4 247 aa10.47□□□□□ -0.73
PRPF38B-202ENST00000370022 A6NJY4 79 aa10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 CRPP02741 224 aa10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 IFI27P40305 119 aaPredicted RBP10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 NDUFA6P56556 154 aa10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 TMEM101Q96IK0 257 aa10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 PRO1933Q9H354 126 aa10.46□□□□□ -0.74
PRPF38B-202ENST00000370022 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-202ENST00000370022 EREGO14944 169 aa10.45□□□□□ -0.74
PRPF38B-202ENST00000370022 RNASEKQ6P5S7 137 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-202ENST00000370022 SNHG12Q9BXW3 62 aa10.45□□□□□ -0.74
PRPF38B-202ENST00000370022 CSDC2Q9Y534 153 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-202ENST00000370022 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
PRPF38B-202ENST00000370022 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
PRPF38B-202ENST00000370022 RMI2Q96E14 147 aa10.44□□□□□ -0.74
PRPF38B-202ENST00000370022 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
PRPF38B-202ENST00000370022 PRR34Q9NV39 138 aa10.44□□□□□ -0.74
PRPF38B-202ENST00000370022 IGLV4-60A0A075B6I1 120 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 RTL8CO15255 209 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 C18orf32Q8TCD1 76 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 PACRGQ96M98 296 aaPredicted RBP10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 Q9HAA7 133 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 UBE2D4Q9Y2X8 147 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 COX11Q9Y6N1 276 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 LINC01546A6NGU7 62 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 TRGC2P03986 189 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 MIAQ16674 131 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 LINC00269Q8N2A0 174 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BKO60814 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BJP06899 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 REG3AQ06141 175 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 SPANXA1Q9NS26 97 aa10.42□□□□□ -0.74
PRPF38B-202ENST00000370022 NPSP0C0P6 89 aa10.41□□□□□ -0.74
PRPF38B-202ENST00000370022 CYSLTR1Q9Y271 337 aa10.41□□□□□ -0.74
PRPF38B-202ENST00000370022 LINC01549A6NIU2 74 aa10.4□□□□□ -0.74
PRPF38B-202ENST00000370022 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.74
PRPF38B-202ENST00000370022 C2orf66Q6UXQ4 117 aa10.4□□□□□ -0.74
PRPF38B-202ENST00000370022 CDC42SE2Q9NRR3 84 aa10.4□□□□□ -0.74
PRPF38B-202ENST00000370022 PYGO1Q9Y3Y4 419 aa10.4□□□□□ -0.74
PRPF38B-202ENST00000370022 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 MAJINQ3KP22 176 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 HIST1H2BLQ99880 126 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 C1orf43Q9BWL3 253 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 AP5S1Q9NUS5 200 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 PSCAO43653 123 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 FABP4P15090 132 aa10.39□□□□□ -0.75
PRPF38B-202ENST00000370022 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
PRPF38B-202ENST00000370022 PRSS29PA6NIE9 313 aa10.38□□□□□ -0.75
PRPF38B-202ENST00000370022 MRPS36P82909 103 aaKnown RBP10.38□□□□□ -0.75
PRPF38B-202ENST00000370022 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
PRPF38B-202ENST00000370022 BIRC6Q9NR09 4857 aa10.37□□□□□ -0.75
PRPF38B-202ENST00000370022 TOMM6Q96B49 74 aa10.37□□□□□ -0.75
PRPF38B-202ENST00000370022 DNAH2Q9P225 4427 aa10.37□□□□□ -0.75
PRPF38B-202ENST00000370022 URB1-AS1Q96HZ7 61 aa10.36□□□□□ -0.75
PRPF38B-202ENST00000370022 CCL25O15444 150 aa10.35□□□□□ -0.75
PRPF38B-202ENST00000370022 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
PRPF38B-202ENST00000370022 Q6ZUT4 128 aa10.35□□□□□ -0.75
PRPF38B-202ENST00000370022 BAGE3Q86Y29 109 aa10.35□□□□□ -0.75
PRPF38B-202ENST00000370022 TIMM17AQ99595 171 aa10.35□□□□□ -0.75
PRPF38B-202ENST00000370022 IGKV3OR2-268A0A0C4DH90 116 aa10.34□□□□□ -0.75
PRPF38B-202ENST00000370022 IGIPA6NJ69 53 aa10.34□□□□□ -0.75
PRPF38B-202ENST00000370022 TNP2Q05952 138 aa10.34□□□□□ -0.75
PRPF38B-202ENST00000370022 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
PRPF38B-202ENST00000370022 CFAP161Q6P656 301 aa10.34□□□□□ -0.75
PRPF38B-202ENST00000370022 TMEM141Q96I45 108 aa10.34□□□□□ -0.75
PRPF38B-202ENST00000370022 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 SS18Q15532 418 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 COL5A1-AS1Q5SY13 56 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 Q6ZN92 141 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 ERASQ7Z444 233 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 ORAOV1Q8WV07 137 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 FAM104AQ969W3 186 aa10.33□□□□□ -0.76
PRPF38B-202ENST00000370022 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
PRPF38B-202ENST00000370022 HBDP02042 147 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms