RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 LINC00643Q86TS7 51 aa11.72□□□□□ -0.53
SYNCRIP-202ENST00000369622 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-202ENST00000369622 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
SYNCRIP-202ENST00000369622 M0QY20 66 aa11.72□□□□□ -0.53
SYNCRIP-202ENST00000369622 NXPH4O95158 308 aa11.72□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A0J9YX75 114 aa11.71□□□□□ -0.53
SYNCRIP-202ENST00000369622 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.53
SYNCRIP-202ENST00000369622 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.54
SYNCRIP-202ENST00000369622 PROK1P58294 105 aa11.71□□□□□ -0.54
SYNCRIP-202ENST00000369622 TIMM17AQ99595 171 aa11.71□□□□□ -0.54
SYNCRIP-202ENST00000369622 Q5XG85 94 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 K7EMT4 169 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 B4DSR2 109 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 LEPROTO15243 131 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 CRYGAP11844 174 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 HIST2H2BDQ6DRA6 164 aa11.7□□□□□ -0.54
SYNCRIP-202ENST00000369622 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 PSMB8P28062 276 aa11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 DAZ2Q13117 558 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 DAZ4Q86SG3 579 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 IMUPQ9GZP8 106 aa11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 DAZ3Q9NR90 486 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 DEFB136Q30KP8 78 aa11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 ANKRD17O75179 2603 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 ABCA12Q86UK0 2595 aa11.69□□□□□ -0.54
SYNCRIP-202ENST00000369622 LRRK2Q5S007 2527 aa11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 PEMTQ9UBM1 199 aa11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 RPS28P62857 69 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
SYNCRIP-202ENST00000369622 KHDC1LQ5JSQ8 128 aa11.67□□□□□ -0.54
SYNCRIP-202ENST00000369622 CFHR3Q02985 330 aa11.67□□□□□ -0.54
SYNCRIP-202ENST00000369622 K7EQG2 157 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 CD28P10747 220 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 TIMM21Q9BVV7 248 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 Q9UF83 564 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 J3QLI3 93 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 DEFB121Q5J5C9 76 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 PIEZO1Q92508 2521 aa11.66□□□□□ -0.54
SYNCRIP-202ENST00000369622 HOXD3P31249 432 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-202ENST00000369622 DEFB131AP59861 70 aa11.65□□□□□ -0.54
SYNCRIP-202ENST00000369622 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.54
SYNCRIP-202ENST00000369622 RPL35AP18077 110 aaKnown RBP11.65□□□□□ -0.54
SYNCRIP-202ENST00000369622 TRBV6-5A0A0K0K1A5 114 aa11.65□□□□□ -0.55
SYNCRIP-202ENST00000369622 TIRAPP58753 221 aa11.65□□□□□ -0.55
SYNCRIP-202ENST00000369622 Q9HAA7 133 aa11.64□□□□□ -0.55
SYNCRIP-202ENST00000369622 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
SYNCRIP-202ENST00000369622 IGHV3-38A0A0C4DH36 116 aa11.64□□□□□ -0.55
SYNCRIP-202ENST00000369622 LITAFQ99732 161 aa11.64□□□□□ -0.55
SYNCRIP-202ENST00000369622 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
SYNCRIP-202ENST00000369622 ATOX1O00244 68 aa11.63□□□□□ -0.55
SYNCRIP-202ENST00000369622 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
SYNCRIP-202ENST00000369622 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
SYNCRIP-202ENST00000369622 C18orf65Q6ZTR6 163 aa11.63□□□□□ -0.55
SYNCRIP-202ENST00000369622 RBMY1A1P0DJD3 496 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 RBMY1CP0DJD4 496 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 SLURP1P55000 103 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 RBMY1FQ15415 496 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 ACYP1P07311 99 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 BAALC-AS2P0C853 105 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 PRORYQ9H606 182 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 LINC01600Q96MT4 127 aa11.62□□□□□ -0.55
SYNCRIP-202ENST00000369622 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
SYNCRIP-202ENST00000369622 CITED2Q99967 270 aaPredicted RBP11.61□□□□□ -0.55
SYNCRIP-202ENST00000369622 TMEM258P61165 79 aa11.61□□□□□ -0.55
SYNCRIP-202ENST00000369622 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
SYNCRIP-202ENST00000369622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 Q8N2B8 174 aa11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 WFDC11Q8NEX6 87 aa11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 EPG5Q9HCE0 2579 aa11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 RPL18AQ02543 176 aaKnown RBP11.6□□□□□ -0.55
SYNCRIP-202ENST00000369622 CCDC168Q8NDH2 2452 aa11.59□□□□□ -0.55
SYNCRIP-202ENST00000369622 TEX15Q9BXT5 2789 aa11.59□□□□□ -0.55
SYNCRIP-202ENST00000369622 PFN2P35080 140 aa11.59□□□□□ -0.55
SYNCRIP-202ENST00000369622 A0A0U1RQV1 116 aa11.58□□□□□ -0.56
SYNCRIP-202ENST00000369622 HIST1H4AP62805 103 aaKnown RBP11.58□□□□□ -0.56
SYNCRIP-202ENST00000369622 LINC01356Q8N9X3 169 aa11.58□□□□□ -0.56
SYNCRIP-202ENST00000369622 WFDC9Q8NEX5 89 aa11.58□□□□□ -0.56
SYNCRIP-202ENST00000369622 ATP5G1P05496 136 aa11.57□□□□□ -0.56
SYNCRIP-202ENST00000369622 FHL2Q14192 279 aa11.57□□□□□ -0.56
SYNCRIP-202ENST00000369622 Q6ZSN1 163 aa11.57□□□□□ -0.56
SYNCRIP-202ENST00000369622 MIAQ16674 131 aa11.57□□□□□ -0.56
SYNCRIP-202ENST00000369622 FBN2P35556 2912 aa11.57□□□□□ -0.56
SYNCRIP-202ENST00000369622 ZNF462Q96JM2 2506 aa11.57□□□□□ -0.56
SYNCRIP-202ENST00000369622 TINCRA0A1B0GVN0 87 aa11.56□□□□□ -0.56
SYNCRIP-202ENST00000369622 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
SYNCRIP-202ENST00000369622 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
SYNCRIP-202ENST00000369622 CHD6Q8TD26 2715 aa11.56□□□□□ -0.56
SYNCRIP-202ENST00000369622 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
SYNCRIP-202ENST00000369622 C14orf132Q9NPU4 83 aa11.56□□□□□ -0.56
SYNCRIP-202ENST00000369622 HILS1P60008 231 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms