RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 HIST1H2BKO60814 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BJP06899 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BOP23527 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BBP33778 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BDP58876 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BCP62807 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST2H2BEQ16778 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.54□□□□□ -1.04
EFNA1-201ENST00000368406 Q6ZN92 141 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BHQ93079 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BNQ99877 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HIST1H2BMQ99879 126 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 TIMM21Q9BVV7 248 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 TRAV8-3A0A0A6YYJ7 113 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 LINC01549A6NIU2 74 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 SERF1AO75920 110 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 HBDP02042 147 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 REG3AQ06141 175 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 RNASE13Q5GAN3 156 aaKnown RBP8.54□□□□□ -1.04
EFNA1-201ENST00000368406 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 ZNF664Q8N3J9 261 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 TOMM6Q96B49 74 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 RMI2Q96E14 147 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 FAT2Q9NYQ8 4349 aa8.54□□□□□ -1.04
EFNA1-201ENST00000368406 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
EFNA1-201ENST00000368406 PSCAO43653 123 aa8.53□□□□□ -1.04
EFNA1-201ENST00000368406 Q6ZUT4 128 aa8.53□□□□□ -1.04
EFNA1-201ENST00000368406 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
EFNA1-201ENST00000368406 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
EFNA1-201ENST00000368406 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.05
EFNA1-201ENST00000368406 MIAQ16674 131 aa8.52□□□□□ -1.05
EFNA1-201ENST00000368406 TMEM141Q96I45 108 aa8.52□□□□□ -1.05
EFNA1-201ENST00000368406 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
EFNA1-201ENST00000368406 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
EFNA1-201ENST00000368406 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 IFITM10A6NMD0 228 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 NDUFA6P56556 154 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 PAPPA-AS1Q5QFB9 102 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 C2orf88Q9BSF0 95 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
EFNA1-201ENST00000368406 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
EFNA1-201ENST00000368406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
EFNA1-201ENST00000368406 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
EFNA1-201ENST00000368406 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
EFNA1-201ENST00000368406 ERASQ7Z444 233 aa8.5□□□□□ -1.05
EFNA1-201ENST00000368406 FAM19A2Q8N3H0 131 aa8.5□□□□□ -1.05
EFNA1-201ENST00000368406 TIMM17AQ99595 171 aa8.5□□□□□ -1.05
EFNA1-201ENST00000368406 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
EFNA1-201ENST00000368406 TM2D2Q9BX73 214 aa8.5□□□□□ -1.05
EFNA1-201ENST00000368406 BIRC6Q9NR09 4857 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 SS18Q15532 418 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 VCX2Q9H322 139 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 PRR34Q9NV39 138 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 COX11Q9Y6N1 276 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 HECTD4Q9Y4D8 3996 aa8.49□□□□□ -1.05
EFNA1-201ENST00000368406 TRAV8-4A0A0B4J246 113 aa8.48□□□□□ -1.05
EFNA1-201ENST00000368406 ATP5LO75964 103 aa8.48□□□□□ -1.05
EFNA1-201ENST00000368406 S100A6P06703 90 aa8.48□□□□□ -1.05
EFNA1-201ENST00000368406 NPSP0C0P6 89 aa8.48□□□□□ -1.05
EFNA1-201ENST00000368406 A0A096LNJ9 63 aa8.47□□□□□ -1.05
EFNA1-201ENST00000368406 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
EFNA1-201ENST00000368406 IGIPA6NJ69 53 aa8.47□□□□□ -1.05
EFNA1-201ENST00000368406 LINC00310P59036 64 aa8.47□□□□□ -1.05
EFNA1-201ENST00000368406 LINC00959A0A1B0GUT2 108 aa8.46□□□□□ -1.05
EFNA1-201ENST00000368406 LEPROTL1O95214 131 aa8.46□□□□□ -1.05
EFNA1-201ENST00000368406 XCL1P47992 114 aa8.46□□□□□ -1.05
EFNA1-201ENST00000368406 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.05
EFNA1-201ENST00000368406 PKD1P98161 4303 aa8.46□□□□□ -1.06
EFNA1-201ENST00000368406 CCL25O15444 150 aa8.46□□□□□ -1.06
EFNA1-201ENST00000368406 NUPR1O60356 82 aa8.46□□□□□ -1.06
EFNA1-201ENST00000368406 FABP4P15090 132 aa8.46□□□□□ -1.06
EFNA1-201ENST00000368406 PDZD11Q5EBL8 140 aa8.46□□□□□ -1.06
EFNA1-201ENST00000368406 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
EFNA1-201ENST00000368406 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 H0Y8G0 127 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 PRSS1P07477 247 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 TNP2Q05952 138 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 PMVKQ15126 192 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 ZC2HC1BQ5TFG8 222 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
EFNA1-201ENST00000368406 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 PKHD1P08F94 4074 aa8.45□□□□□ -1.06
EFNA1-201ENST00000368406 EREGO14944 169 aa8.43□□□□□ -1.06
EFNA1-201ENST00000368406 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
EFNA1-201ENST00000368406 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
EFNA1-201ENST00000368406 FAM104AQ969W3 186 aa8.43□□□□□ -1.06
EFNA1-201ENST00000368406 AMELXQ99217 191 aa8.43□□□□□ -1.06
EFNA1-201ENST00000368406 S100A2P29034 98 aa8.42□□□□□ -1.06
EFNA1-201ENST00000368406 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
EFNA1-201ENST00000368406 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
EFNA1-201ENST00000368406 TMA7Q9Y2S6 64 aaKnown RBP8.42□□□□□ -1.06
EFNA1-201ENST00000368406 LECT2O14960 151 aa8.41□□□□□ -1.06
EFNA1-201ENST00000368406 MALP21145 153 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms